RNA–Protein interactions for RNA: ENST00000556096.6

VPS33B-205, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 1,731 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-205ENST00000556096 TCF7P36402 384 aaPredicted RBP16.08■□□□□ 0.16
VPS33B-205ENST00000556096 RFC5P40937 340 aa16.08■□□□□ 0.16
VPS33B-205ENST00000556096 LBX1P52954 281 aa16.08■□□□□ 0.16
VPS33B-205ENST00000556096 POLGP54098 1239 aaPredicted RBP16.08■□□□□ 0.16
VPS33B-205ENST00000556096 EMC2Q15006 297 aa16.08■□□□□ 0.16
VPS33B-205ENST00000556096 TARBP2Q15633 366 aaKnown RBP16.08■□□□□ 0.16
VPS33B-205ENST00000556096 ZNF467Q7Z7K2 595 aaPredicted RBP16.08■□□□□ 0.16
VPS33B-205ENST00000556096 ZNF296Q8WUU4 475 aaPredicted RBP16.08■□□□□ 0.16
VPS33B-205ENST00000556096 FAM167AQ96KS9 214 aa16.08■□□□□ 0.16
VPS33B-205ENST00000556096 GPR20Q99678 358 aa16.08■□□□□ 0.16
VPS33B-205ENST00000556096 DNAI1Q9UI46 699 aa16.08■□□□□ 0.16
VPS33B-205ENST00000556096 REXO2Q9Y3B8 237 aaKnown RBP16.08■□□□□ 0.16
VPS33B-205ENST00000556096 ZNF236Q9UL36 1845 aa16.07■□□□□ 0.16
VPS33B-205ENST00000556096 DENND3A2RUS2 1198 aa16.07■□□□□ 0.16
VPS33B-205ENST00000556096 HSPA8P11142 646 aaKnown RBP16.07■□□□□ 0.16
VPS33B-205ENST00000556096 PON1P27169 355 aa16.07■□□□□ 0.16
VPS33B-205ENST00000556096 CTGFP29279 349 aa16.07■□□□□ 0.16
VPS33B-205ENST00000556096 POLR2FP61218 127 aaKnown RBP16.07■□□□□ 0.16
VPS33B-205ENST00000556096 KLHDC7AQ5VTJ3 777 aa16.07■□□□□ 0.16
VPS33B-205ENST00000556096 INTS8Q75QN2 995 aaKnown RBP16.07■□□□□ 0.16
VPS33B-205ENST00000556096 XXYLT1Q8NBI6 393 aa16.07■□□□□ 0.16
VPS33B-205ENST00000556096 POLR3FQ9H1D9 316 aaPredicted RBP16.07■□□□□ 0.16
VPS33B-205ENST00000556096 MYO6Q9UM54 1294 aa16.07■□□□□ 0.16
VPS33B-205ENST00000556096 DIS3Q9Y2L1 958 aaKnown RBP16.07■□□□□ 0.16
VPS33B-205ENST00000556096 DOCK3Q8IZD9 2030 aa16.06■□□□□ 0.16
VPS33B-205ENST00000556096 SSU72P8A0A1W2PR75 194 aa16.06■□□□□ 0.16
VPS33B-205ENST00000556096 KRT13P13646 458 aa16.06■□□□□ 0.16
VPS33B-205ENST00000556096 SLC9A1P19634 815 aa16.06■□□□□ 0.16
VPS33B-205ENST00000556096 ADORA2AP29274 412 aa16.06■□□□□ 0.16
VPS33B-205ENST00000556096 SOX10P56693 466 aa16.06■□□□□ 0.16
VPS33B-205ENST00000556096 GNG11P61952 73 aa16.06■□□□□ 0.16
VPS33B-205ENST00000556096 BFSP1Q12934 665 aa16.06■□□□□ 0.16
VPS33B-205ENST00000556096 MAPK8IP2Q13387 824 aaPredicted RBP16.06■□□□□ 0.16
VPS33B-205ENST00000556096 TTLL4Q14679 1199 aa16.06■□□□□ 0.16
VPS33B-205ENST00000556096 ARHGAP29Q52LW3 1261 aa16.06■□□□□ 0.16
VPS33B-205ENST00000556096 SFMBT2Q5VUG0 894 aa16.06■□□□□ 0.16
VPS33B-205ENST00000556096 ARMCX2Q7L311 632 aa16.06■□□□□ 0.16
VPS33B-205ENST00000556096 PLPPR4Q7Z2D5 763 aa16.06■□□□□ 0.16
VPS33B-205ENST00000556096 FBXO16Q8IX29 292 aaPredicted RBP16.06■□□□□ 0.16
VPS33B-205ENST00000556096 DHX37Q8IY37 1157 aaKnown RBP16.06■□□□□ 0.16
VPS33B-205ENST00000556096 CD99L2Q8TCZ2 262 aa16.06■□□□□ 0.16
VPS33B-205ENST00000556096 SCFD2Q8WU76 684 aa16.06■□□□□ 0.16
VPS33B-205ENST00000556096 SLC7A3Q8WY07 619 aa16.06■□□□□ 0.16
VPS33B-205ENST00000556096 CCDC42Q96M95 316 aa16.06■□□□□ 0.16
VPS33B-205ENST00000556096 CBWD1Q9BRT8 395 aa16.06■□□□□ 0.16
VPS33B-205ENST00000556096 AZI2Q9H6S1 392 aa16.06■□□□□ 0.16
VPS33B-205ENST00000556096 NLRC4Q9NPP4 1024 aa16.06■□□□□ 0.16
VPS33B-205ENST00000556096 LZTFL1Q9NQ48 299 aa16.06■□□□□ 0.16
VPS33B-205ENST00000556096 HSPBP1Q9NZL4 362 aa16.06■□□□□ 0.16
VPS33B-205ENST00000556096 AIPL1Q9NZN9 384 aa16.06■□□□□ 0.16
VPS33B-205ENST00000556096 ARHGAP20Q9P2F6 1191 aa16.06■□□□□ 0.16
VPS33B-205ENST00000556096 ARHGAP28Q9P2N2 729 aa16.06■□□□□ 0.16
VPS33B-205ENST00000556096 MYO1AQ9UBC5 1043 aa16.06■□□□□ 0.16
VPS33B-205ENST00000556096 IPO7O95373 1038 aaKnown RBP16.05■□□□□ 0.16
VPS33B-205ENST00000556096 LCA5LO95447 670 aa16.05■□□□□ 0.16
VPS33B-205ENST00000556096 TXNP10599 105 aaKnown RBP16.05■□□□□ 0.16
VPS33B-205ENST00000556096 ARL2P36404 184 aa16.05■□□□□ 0.16
VPS33B-205ENST00000556096 ARHGAP25P42331 645 aa16.05■□□□□ 0.16
VPS33B-205ENST00000556096 FMO5P49326 533 aa16.05■□□□□ 0.16
VPS33B-205ENST00000556096 SP3Q02447 781 aa16.05■□□□□ 0.16
VPS33B-205ENST00000556096 GPR142Q7Z601 462 aa16.05■□□□□ 0.16
VPS33B-205ENST00000556096 BBXQ8WY36 941 aaPredicted RBP16.05■□□□□ 0.16
VPS33B-205ENST00000556096 CFHR5Q9BXR6 569 aa16.05■□□□□ 0.16
VPS33B-205ENST00000556096 PCIF1Q9H4Z3 704 aa16.05■□□□□ 0.16
VPS33B-205ENST00000556096 HAUS4Q9H6D7 363 aa16.05■□□□□ 0.16
VPS33B-205ENST00000556096 L2HGDHQ9H9P8 463 aa16.05■□□□□ 0.16
VPS33B-205ENST00000556096 VTA1Q9NP79 307 aa16.05■□□□□ 0.16
VPS33B-205ENST00000556096 DAAM1Q9Y4D1 1078 aa16.05■□□□□ 0.16
VPS33B-205ENST00000556096 IVNS1ABPQ9Y6Y0 642 aa16.05■□□□□ 0.16
VPS33B-205ENST00000556096 EMSYQ7Z589 1322 aa16.05■□□□□ 0.16
VPS33B-205ENST00000556096 CASP8AP2Q9UKL3 1982 aa16.05■□□□□ 0.16
VPS33B-205ENST00000556096 RBM47A0AV96 593 aaKnown RBP16.05■□□□□ 0.16
VPS33B-205ENST00000556096 TISP43B9A030 160 aa16.05■□□□□ 0.16
VPS33B-205ENST00000556096 NOP56O00567 594 aaKnown RBP16.05■□□□□ 0.16
VPS33B-205ENST00000556096 DYNC1I1O14576 645 aa16.05■□□□□ 0.16
VPS33B-205ENST00000556096 KIF5CO60282 957 aa16.05■□□□□ 0.16
VPS33B-205ENST00000556096 SERPING1P05155 500 aa16.05■□□□□ 0.16
VPS33B-205ENST00000556096 UCHL3P15374 230 aa16.05■□□□□ 0.16
VPS33B-205ENST00000556096 CNGA1P29973 690 aa16.05■□□□□ 0.16
VPS33B-205ENST00000556096 SLC26A2P50443 739 aa16.05■□□□□ 0.16
VPS33B-205ENST00000556096 HSDL1Q3SXM5 330 aa16.05■□□□□ 0.16
VPS33B-205ENST00000556096 BRDTQ58F21 947 aaPredicted RBP16.05■□□□□ 0.16
VPS33B-205ENST00000556096 EXOC8Q8IYI6 725 aa16.05■□□□□ 0.16
VPS33B-205ENST00000556096 KIFC3Q9BVG8 833 aa16.05■□□□□ 0.16
VPS33B-205ENST00000556096 SIX2Q9NPC8 291 aa16.05■□□□□ 0.16
VPS33B-205ENST00000556096 ADGRA3Q8IWK6 1321 aa16.05■□□□□ 0.16
VPS33B-205ENST00000556096 A0A0U1RQJ8 604 aa16.04■□□□□ 0.16
VPS33B-205ENST00000556096 ANKRD63C9JTQ0 380 aa16.04■□□□□ 0.16
VPS33B-205ENST00000556096 P4HA2O15460 535 aa16.04■□□□□ 0.16
VPS33B-205ENST00000556096 MAFO75444 373 aaPredicted RBP16.04■□□□□ 0.16
VPS33B-205ENST00000556096 ACTN1P12814 892 aa16.04■□□□□ 0.16
VPS33B-205ENST00000556096 MAPK4P31152 587 aa16.04■□□□□ 0.16
VPS33B-205ENST00000556096 CASQ1P31415 396 aa16.04■□□□□ 0.16
VPS33B-205ENST00000556096 EIF4A3P38919 411 aaKnown RBP16.04■□□□□ 0.16
VPS33B-205ENST00000556096 NAMPTP43490 491 aa16.04■□□□□ 0.16
VPS33B-205ENST00000556096 ASTE1Q2TB18 679 aaPredicted RBP16.04■□□□□ 0.16
VPS33B-205ENST00000556096 SLC9C1Q4G0N8 1177 aa16.04■□□□□ 0.16
VPS33B-205ENST00000556096 HGSNATQ68CP4 663 aa16.04■□□□□ 0.16
VPS33B-205ENST00000556096 MAMDC4Q6UXC1 1216 aa16.04■□□□□ 0.16
VPS33B-205ENST00000556096 ATRIPQ8WXE1 791 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms