RNA–Protein interactions for RNA: ENST00000555890.5

SLIRP-204, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 471 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-204ENST00000555890 FAM110CQ1W6H9 321 aa7.6□□□□□ -1.19
SLIRP-204ENST00000555890 USH1GQ495M9 461 aa7.6□□□□□ -1.19
SLIRP-204ENST00000555890 PPM1JQ5JR12 505 aa7.6□□□□□ -1.19
SLIRP-204ENST00000555890 TREML2Q5T2D2 321 aa7.6□□□□□ -1.19
SLIRP-204ENST00000555890 USP17L6PQ6QN14 398 aa7.6□□□□□ -1.19
SLIRP-204ENST00000555890 PLA2G4DQ86XP0 818 aa7.6□□□□□ -1.19
SLIRP-204ENST00000555890 SLFN12Q8IYM2 578 aa7.6□□□□□ -1.19
SLIRP-204ENST00000555890 SPATA20Q8TB22 786 aa7.6□□□□□ -1.19
SLIRP-204ENST00000555890 ZNF516Q92618 1163 aa7.6□□□□□ -1.19
SLIRP-204ENST00000555890 RUBCNQ92622 972 aa7.6□□□□□ -1.19
SLIRP-204ENST00000555890 USP6NLQ92738 828 aa7.6□□□□□ -1.19
SLIRP-204ENST00000555890 ALKBH8Q96BT7 664 aaKnown RBP7.6□□□□□ -1.19
SLIRP-204ENST00000555890 MRFAP1L1Q96HT8 127 aa7.6□□□□□ -1.19
SLIRP-204ENST00000555890 CDK5RAP3Q96JB5 506 aa7.6□□□□□ -1.19
SLIRP-204ENST00000555890 MTMR9Q96QG7 549 aa7.6□□□□□ -1.19
SLIRP-204ENST00000555890 FAM129BQ96TA1 746 aa7.6□□□□□ -1.19
SLIRP-204ENST00000555890 DUSP9Q99956 384 aaKnown RBP7.6□□□□□ -1.19
SLIRP-204ENST00000555890 ANO3Q9BYT9 981 aa7.6□□□□□ -1.19
SLIRP-204ENST00000555890 LRRC27Q9C0I9 530 aa7.6□□□□□ -1.19
SLIRP-204ENST00000555890 KIAA1683Q9H0B3 1180 aa7.6□□□□□ -1.19
SLIRP-204ENST00000555890 RANBP17Q9H2T7 1088 aaKnown RBP7.6□□□□□ -1.19
SLIRP-204ENST00000555890 PICK1Q9NRD5 415 aa7.6□□□□□ -1.19
SLIRP-204ENST00000555890 DISC1Q9NRI5 854 aa7.6□□□□□ -1.19
SLIRP-204ENST00000555890 METTL5Q9NRN9 209 aaKnown RBP7.6□□□□□ -1.19
SLIRP-204ENST00000555890 CTDP1Q9Y5B0 961 aaPredicted RBP7.6□□□□□ -1.19
SLIRP-204ENST00000555890 COL4A4P53420 1690 aaPredicted RBP7.6□□□□□ -1.19
SLIRP-204ENST00000555890 KMT2EQ8IZD2 1858 aa7.6□□□□□ -1.19
SLIRP-204ENST00000555890 CYP3A7-CYP3A51PA0A087WV96 503 aa7.59□□□□□ -1.19
SLIRP-204ENST00000555890 PRR5-ARHGAP8B1AHC4 643 aa7.59□□□□□ -1.19
SLIRP-204ENST00000555890 TNFRSF10BO14763 440 aa7.59□□□□□ -1.19
SLIRP-204ENST00000555890 TBX3O15119 743 aa7.59□□□□□ -1.19
SLIRP-204ENST00000555890 AP5Z1O43299 807 aa7.59□□□□□ -1.19
SLIRP-204ENST00000555890 CBFA2T2O43439 604 aa7.59□□□□□ -1.19
SLIRP-204ENST00000555890 PEX10O60683 326 aa7.59□□□□□ -1.19
SLIRP-204ENST00000555890 TDP2O95551 362 aa7.59□□□□□ -1.19
SLIRP-204ENST00000555890 RAG1P15918 1043 aa7.59□□□□□ -1.19
SLIRP-204ENST00000555890 CYP3A7P24462 503 aa7.59□□□□□ -1.19
SLIRP-204ENST00000555890 ZNF76P36508 570 aa7.59□□□□□ -1.19
SLIRP-204ENST00000555890 SNAP25P60880 206 aa7.59□□□□□ -1.19
SLIRP-204ENST00000555890 ARHGAP8P85298 464 aa7.59□□□□□ -1.19
SLIRP-204ENST00000555890 DAB2P98082 770 aa7.59□□□□□ -1.19
SLIRP-204ENST00000555890 DHX9Q08211 1270 aaKnown RBP7.59□□□□□ -1.19
SLIRP-204ENST00000555890 C19orf57Q0VDD7 668 aa7.59□□□□□ -1.19
SLIRP-204ENST00000555890 DHX8Q14562 1220 aaKnown RBP7.59□□□□□ -1.19
SLIRP-204ENST00000555890 KARSQ15046 597 aaKnown RBP7.59□□□□□ -1.19
SLIRP-204ENST00000555890 COX20Q5RI15 118 aa7.59□□□□□ -1.19
SLIRP-204ENST00000555890 KRT79Q5XKE5 535 aa7.59□□□□□ -1.19
SLIRP-204ENST00000555890 FASTKD5Q7L8L6 764 aaKnown RBP7.59□□□□□ -1.19
SLIRP-204ENST00000555890 GRAMD1CQ8IYS0 662 aa7.59□□□□□ -1.19
SLIRP-204ENST00000555890 SCYL3Q8IZE3 742 aa7.59□□□□□ -1.19
SLIRP-204ENST00000555890 IGSF22Q8N9C0 903 aa7.59□□□□□ -1.19
SLIRP-204ENST00000555890 PRPF38AQ8NAV1 312 aaKnown RBP7.59□□□□□ -1.19
SLIRP-204ENST00000555890 ENOX1Q8TC92 643 aaKnown RBP7.59□□□□□ -1.19
SLIRP-204ENST00000555890 POP1Q99575 1024 aaKnown RBP7.59□□□□□ -1.19
SLIRP-204ENST00000555890 WDR18Q9BV38 432 aa7.59□□□□□ -1.19
SLIRP-204ENST00000555890 C2orf49Q9BVC5 232 aaPredicted RBP7.59□□□□□ -1.19
SLIRP-204ENST00000555890 ETNK1Q9HBU6 452 aa7.59□□□□□ -1.19
SLIRP-204ENST00000555890 SCHIP1Q9P0W5 487 aaPredicted RBP7.59□□□□□ -1.19
SLIRP-204ENST00000555890 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.59□□□□□ -1.19
SLIRP-204ENST00000555890 PCDHA12Q9UN75 941 aa7.59□□□□□ -1.19
SLIRP-204ENST00000555890 ZHX2Q9Y6X8 837 aa7.59□□□□□ -1.19
SLIRP-204ENST00000555890 PP2D1A8MPX8 630 aa7.58□□□□□ -1.2
SLIRP-204ENST00000555890 C19orf81C9J6K1 198 aa7.58□□□□□ -1.2
SLIRP-204ENST00000555890 GCOM1H8Y6P7 765 aaPredicted RBP7.58□□□□□ -1.2
SLIRP-204ENST00000555890 MEIS2O14770 477 aa7.58□□□□□ -1.2
SLIRP-204ENST00000555890 ZBTB24O43167 697 aaPredicted RBP7.58□□□□□ -1.2
SLIRP-204ENST00000555890 SLC37A4O43826 429 aa7.58□□□□□ -1.2
SLIRP-204ENST00000555890 ZBED4O75132 1171 aa7.58□□□□□ -1.2
SLIRP-204ENST00000555890 STAU1O95793 577 aaKnown RBP7.58□□□□□ -1.2
SLIRP-204ENST00000555890 IGHA2P01877 340 aa7.58□□□□□ -1.2
SLIRP-204ENST00000555890 RPN1P04843 607 aaKnown RBP7.58□□□□□ -1.2
SLIRP-204ENST00000555890 CYP3A4P08684 503 aa7.58□□□□□ -1.2
SLIRP-204ENST00000555890 POLR2MP0CAP2 368 aa7.58□□□□□ -1.2
SLIRP-204ENST00000555890 XRCC5P13010 732 aaKnown RBP7.58□□□□□ -1.2
SLIRP-204ENST00000555890 CYP2B6P20813 491 aa7.58□□□□□ -1.2
SLIRP-204ENST00000555890 CDC25AP30304 524 aa7.58□□□□□ -1.2
SLIRP-204ENST00000555890 HOXA7P31268 230 aaPredicted RBP7.58□□□□□ -1.2
SLIRP-204ENST00000555890 SREBF1P36956 1147 aa7.58□□□□□ -1.2
SLIRP-204ENST00000555890 SIGLEC14Q08ET2 396 aa7.58□□□□□ -1.2
SLIRP-204ENST00000555890 RAD51AP2Q09MP3 1159 aa7.58□□□□□ -1.2
SLIRP-204ENST00000555890 PSMD2Q13200 908 aa7.58□□□□□ -1.2
SLIRP-204ENST00000555890 NCAPHQ15003 741 aa7.58□□□□□ -1.2
SLIRP-204ENST00000555890 CCL14Q16627 93 aa7.58□□□□□ -1.2
SLIRP-204ENST00000555890 KIAA1755Q5JYT7 1200 aa7.58□□□□□ -1.2
SLIRP-204ENST00000555890 SLC39A5Q6ZMH5 540 aa7.58□□□□□ -1.2
SLIRP-204ENST00000555890 GADL1Q6ZQY3 521 aa7.58□□□□□ -1.2
SLIRP-204ENST00000555890 SV2BQ7L1I2 683 aa7.58□□□□□ -1.2
SLIRP-204ENST00000555890 CYP2U1Q7Z449 544 aa7.58□□□□□ -1.2
SLIRP-204ENST00000555890 NT5DC4Q86YG4 428 aa7.58□□□□□ -1.2
SLIRP-204ENST00000555890 MCF2L2Q86YR7 1114 aa7.58□□□□□ -1.2
SLIRP-204ENST00000555890 SAMD3Q8N6K7 520 aa7.58□□□□□ -1.2
SLIRP-204ENST00000555890 SPC24Q8NBT2 197 aa7.58□□□□□ -1.2
SLIRP-204ENST00000555890 GLIS3Q8NEA6 775 aa7.58□□□□□ -1.2
SLIRP-204ENST00000555890 ERMNQ8TAM6 284 aa7.58□□□□□ -1.2
SLIRP-204ENST00000555890 MBOAT7Q96N66 472 aa7.58□□□□□ -1.2
SLIRP-204ENST00000555890 SLF1Q9BQI6 1058 aa7.58□□□□□ -1.2
SLIRP-204ENST00000555890 TANGO6Q9C0B7 1094 aa7.58□□□□□ -1.2
SLIRP-204ENST00000555890 TTC12Q9H892 705 aaPredicted RBP7.58□□□□□ -1.2
SLIRP-204ENST00000555890 KBTBD4Q9NVX7 518 aa7.58□□□□□ -1.2
SLIRP-204ENST00000555890 STK17AQ9UEE5 414 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms