RNA–Protein interactions for RNA: ENST00000555773.5

SHMT2-221, Transcript of serine hydroxymethyltransferase 2, human

TSL 2

Gene SHMT2, Length 600 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SHMT2-221	ENST00000555773	SLC16A4	O15374	487 aa		13.73	□□□□□ -0.21
SHMT2-221	ENST00000555773	DARS	P14868	501 aa	Known RBP	13.73	□□□□□ -0.21
SHMT2-221	ENST00000555773	NMT1	P30419	496 aa	Known RBP	13.73	□□□□□ -0.21
SHMT2-221	ENST00000555773	MGAT3	Q09327	533 aa		13.73	□□□□□ -0.21
SHMT2-221	ENST00000555773	TMEM62	Q0P6H9	643 aa		13.73	□□□□□ -0.21
SHMT2-221	ENST00000555773	STK4	Q13043	487 aa		13.73	□□□□□ -0.21
SHMT2-221	ENST00000555773	COBLL1	Q53SF7	1204 aa		13.73	□□□□□ -0.21
SHMT2-221	ENST00000555773	ZNF618	Q5T7W0	954 aa		13.73	□□□□□ -0.21
SHMT2-221	ENST00000555773	ZNF507	Q8TCN5	953 aa		13.73	□□□□□ -0.21
SHMT2-221	ENST00000555773	ANP32E	Q9BTT0	268 aa		13.73	□□□□□ -0.21
SHMT2-221	ENST00000555773	NOC4L	Q9BVI4	516 aa	Known RBP	13.73	□□□□□ -0.21
SHMT2-221	ENST00000555773	HIPK3	Q9H422	1215 aa		13.73	□□□□□ -0.21
SHMT2-221	ENST00000555773	FZD8	Q9H461	694 aa		13.73	□□□□□ -0.21
SHMT2-221	ENST00000555773	SLC39A2	Q9NP94	309 aa		13.73	□□□□□ -0.21
SHMT2-221	ENST00000555773	TBC1D7	Q9P0N9	293 aa		13.73	□□□□□ -0.21
SHMT2-221	ENST00000555773	CDY2A	Q9Y6F7	541 aa		13.73	□□□□□ -0.21
SHMT2-221	ENST00000555773	KAT6A	Q92794	2004 aa		13.73	□□□□□ -0.21
SHMT2-221	ENST00000555773	DENND3	A2RUS2	1198 aa		13.72	□□□□□ -0.21
SHMT2-221	ENST00000555773		K7ENM7	598 aa		13.72	□□□□□ -0.21
SHMT2-221	ENST00000555773	KIAA0355	O15063	1070 aa		13.72	□□□□□ -0.21
SHMT2-221	ENST00000555773	GCNT3	O95395	438 aa		13.72	□□□□□ -0.21
SHMT2-221	ENST00000555773	NLRP12	P59046	1061 aa		13.72	□□□□□ -0.21
SHMT2-221	ENST00000555773	NCBP1	Q09161	790 aa	Known RBP	13.72	□□□□□ -0.21
SHMT2-221	ENST00000555773	STRN3	Q13033	797 aa		13.72	□□□□□ -0.21
SHMT2-221	ENST00000555773	MAPK6	Q16659	721 aa		13.72	□□□□□ -0.21
SHMT2-221	ENST00000555773	FAM187B	Q17R55	369 aa		13.72	□□□□□ -0.21
SHMT2-221	ENST00000555773	CT47A1	Q5JQC4	288 aa	Predicted RBP	13.72	□□□□□ -0.21
SHMT2-221	ENST00000555773	TRAF7	Q6Q0C0	670 aa		13.72	□□□□□ -0.21
SHMT2-221	ENST00000555773	LRRC8D	Q7L1W4	858 aa		13.72	□□□□□ -0.21
SHMT2-221	ENST00000555773	EPM2AIP1	Q7L775	607 aa	Predicted RBP	13.72	□□□□□ -0.21
SHMT2-221	ENST00000555773	MLKL	Q8NB16	471 aa		13.72	□□□□□ -0.21
SHMT2-221	ENST00000555773	HPS3	Q969F9	1004 aa		13.72	□□□□□ -0.21
SHMT2-221	ENST00000555773	PRIMPOL	Q96LW4	560 aa		13.72	□□□□□ -0.21
SHMT2-221	ENST00000555773	ACCS	Q96QU6	501 aa		13.72	□□□□□ -0.21
SHMT2-221	ENST00000555773	OSMR	Q99650	979 aa		13.72	□□□□□ -0.21
SHMT2-221	ENST00000555773	TMEM206	Q9H813	350 aa		13.72	□□□□□ -0.21
SHMT2-221	ENST00000555773	CDHR5	Q9HBB8	845 aa		13.72	□□□□□ -0.21
SHMT2-221	ENST00000555773	PRMT7	Q9NVM4	692 aa	Predicted RBP	13.72	□□□□□ -0.21
SHMT2-221	ENST00000555773	TBX20	Q9UMR3	447 aa		13.72	□□□□□ -0.21
SHMT2-221	ENST00000555773	EXOC7	Q9UPT5	735 aa		13.72	□□□□□ -0.21
SHMT2-221	ENST00000555773	GINS2	Q9Y248	185 aa		13.72	□□□□□ -0.21
SHMT2-221	ENST00000555773	LOXHD1	Q8IVV2	1947 aa		13.72	□□□□□ -0.21
SHMT2-221	ENST00000555773	UBE4B	O95155	1302 aa		13.71	□□□□□ -0.21
SHMT2-221	ENST00000555773	ADGRA3	Q8IWK6	1321 aa		13.71	□□□□□ -0.21
SHMT2-221	ENST00000555773	INO80B-WBP1	J3KQ70	363 aa		13.71	□□□□□ -0.21
SHMT2-221	ENST00000555773	BIN1	O00499	593 aa		13.71	□□□□□ -0.21
SHMT2-221	ENST00000555773	ACKR2	O00590	384 aa		13.71	□□□□□ -0.21
SHMT2-221	ENST00000555773	GPR182	O15218	404 aa		13.71	□□□□□ -0.21
SHMT2-221	ENST00000555773	PPP1R37	O75864	691 aa		13.71	□□□□□ -0.21
SHMT2-221	ENST00000555773	TIMP1	P01033	207 aa		13.71	□□□□□ -0.21
SHMT2-221	ENST00000555773	CTSH	P09668	335 aa		13.71	□□□□□ -0.21
SHMT2-221	ENST00000555773	IQCF3	P0C7M6	154 aa		13.71	□□□□□ -0.21
SHMT2-221	ENST00000555773	SFPQ	P23246	707 aa	Known RBP eCLIP	13.71	□□□□□ -0.21
SHMT2-221	ENST00000555773	MBTD1	Q05BQ5	628 aa		13.71	□□□□□ -0.21
SHMT2-221	ENST00000555773	STIM1	Q13586	685 aa		13.71	□□□□□ -0.21
SHMT2-221	ENST00000555773	BMT2	Q1RMZ1	405 aa		13.71	□□□□□ -0.21
SHMT2-221	ENST00000555773	ZSCAN23	Q3MJ62	389 aa		13.71	□□□□□ -0.21
SHMT2-221	ENST00000555773	FBXO47	Q5MNV8	452 aa		13.71	□□□□□ -0.21
SHMT2-221	ENST00000555773	L1TD1	Q5T7N2	865 aa	Known RBP	13.71	□□□□□ -0.21
SHMT2-221	ENST00000555773	ISM2	Q6H9L7	571 aa		13.71	□□□□□ -0.21
SHMT2-221	ENST00000555773	PPP4R3CP	Q6ZMV5	832 aa		13.71	□□□□□ -0.21
SHMT2-221	ENST00000555773	MYOCD	Q8IZQ8	938 aa		13.71	□□□□□ -0.21
SHMT2-221	ENST00000555773	GUF1	Q8N442	669 aa	Known RBP	13.71	□□□□□ -0.21
SHMT2-221	ENST00000555773	KIAA0895	Q8NCT3	520 aa		13.71	□□□□□ -0.21
SHMT2-221	ENST00000555773	ZNF668	Q96K58	619 aa	Predicted RBP	13.71	□□□□□ -0.21
SHMT2-221	ENST00000555773	PPP1R16B	Q96T49	567 aa		13.71	□□□□□ -0.21
SHMT2-221	ENST00000555773	KIFC3	Q9BVG8	833 aa		13.71	□□□□□ -0.21
SHMT2-221	ENST00000555773	ANO10	Q9NW15	660 aa		13.71	□□□□□ -0.21
SHMT2-221	ENST00000555773	PRKAG2	Q9UGJ0	569 aa		13.71	□□□□□ -0.21
SHMT2-221	ENST00000555773	TRIM43B	A6NCK2	446 aa		13.7	□□□□□ -0.22
SHMT2-221	ENST00000555773	EVI5	O60447	810 aa		13.7	□□□□□ -0.22
SHMT2-221	ENST00000555773	RPS6KA5	O75582	802 aa		13.7	□□□□□ -0.22
SHMT2-221	ENST00000555773	PRKCB	P05771	671 aa		13.7	□□□□□ -0.22
SHMT2-221	ENST00000555773	CCDC192	P0DO97	292 aa		13.7	□□□□□ -0.22
SHMT2-221	ENST00000555773	MYB	P10242	640 aa		13.7	□□□□□ -0.22
SHMT2-221	ENST00000555773	BMP6	P22004	513 aa		13.7	□□□□□ -0.22
SHMT2-221	ENST00000555773	AXL	P30530	894 aa		13.7	□□□□□ -0.22
SHMT2-221	ENST00000555773	RFC2	P35250	354 aa		13.7	□□□□□ -0.22
SHMT2-221	ENST00000555773	CASP5	P51878	434 aa		13.7	□□□□□ -0.22
SHMT2-221	ENST00000555773	SNRPF	P62306	86 aa	Known RBP	13.7	□□□□□ -0.22
SHMT2-221	ENST00000555773	ZC2HC1C	Q53FD0	456 aa	Predicted RBP	13.7	□□□□□ -0.22
SHMT2-221	ENST00000555773	MAP4K3	Q8IVH8	894 aa		13.7	□□□□□ -0.22
SHMT2-221	ENST00000555773	ADSSL1	Q8N142	457 aa		13.7	□□□□□ -0.22
SHMT2-221	ENST00000555773	SCFD1	Q8WVM8	642 aa		13.7	□□□□□ -0.22
SHMT2-221	ENST00000555773	TRIM43	Q96BQ3	446 aa	Predicted RBP	13.7	□□□□□ -0.22
SHMT2-221	ENST00000555773	DHTKD1	Q96HY7	919 aa	Predicted RBP	13.7	□□□□□ -0.22
SHMT2-221	ENST00000555773	CCDC113	Q9H0I3	377 aa		13.7	□□□□□ -0.22
SHMT2-221	ENST00000555773	MINDY3	Q9H8M7	445 aa		13.7	□□□□□ -0.22
SHMT2-221	ENST00000555773	DACH1	Q9UI36	760 aa		13.7	□□□□□ -0.22
SHMT2-221	ENST00000555773	GDA	Q9Y2T3	454 aa		13.7	□□□□□ -0.22
SHMT2-221	ENST00000555773	PSMA7	O14818	248 aa		13.69	□□□□□ -0.22
SHMT2-221	ENST00000555773	ERLIN2	O94905	339 aa		13.69	□□□□□ -0.22
SHMT2-221	ENST00000555773	PRPF6	O94906	941 aa	Known RBP	13.69	□□□□□ -0.22
SHMT2-221	ENST00000555773	PIGR	P01833	764 aa		13.69	□□□□□ -0.22
SHMT2-221	ENST00000555773	RAG1	P15918	1043 aa		13.69	□□□□□ -0.22
SHMT2-221	ENST00000555773	PRCP	P42785	496 aa		13.69	□□□□□ -0.22
SHMT2-221	ENST00000555773	PRPF4B	Q13523	1007 aa	Known RBP	13.69	□□□□□ -0.22
SHMT2-221	ENST00000555773	LPIN1	Q14693	890 aa		13.69	□□□□□ -0.22
SHMT2-221	ENST00000555773	STX1A	Q16623	288 aa		13.69	□□□□□ -0.22
SHMT2-221	ENST00000555773	KNOP1	Q1ED39	458 aa	Known RBP	13.69	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms