RNA–Protein interactions for RNA: ENST00000555541.1

SNX6-204, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-204ENST00000555541 DNAI1Q9UI46 699 aa5.62□□□□□ -1.51
SNX6-204ENST00000555541 ZAR1LA6NP61 321 aa5.61□□□□□ -1.51
SNX6-204ENST00000555541 GOLGA8BA8MQT2 603 aa5.61□□□□□ -1.51
SNX6-204ENST00000555541 DNAJC8O75937 253 aaPredicted RBP5.61□□□□□ -1.51
SNX6-204ENST00000555541 CYP17A1P05093 508 aa5.61□□□□□ -1.51
SNX6-204ENST00000555541 CLK3P49761 638 aaKnown RBP5.61□□□□□ -1.51
SNX6-204ENST00000555541 EPHA7Q15375 998 aa5.61□□□□□ -1.51
SNX6-204ENST00000555541 ESRP1Q6NXG1 681 aaKnown RBP5.61□□□□□ -1.51
SNX6-204ENST00000555541 UNQ6494/PRO21346Q6UXR6 183 aa5.61□□□□□ -1.51
SNX6-204ENST00000555541 BHLHA9Q7RTU4 235 aa5.61□□□□□ -1.51
SNX6-204ENST00000555541 CXorf67Q86X51 503 aaPredicted RBP5.61□□□□□ -1.51
SNX6-204ENST00000555541 ADGRG3Q86Y34 549 aa5.61□□□□□ -1.51
SNX6-204ENST00000555541 CMTM4Q8IZR5 234 aa5.61□□□□□ -1.51
SNX6-204ENST00000555541 PPP1R14CQ8TAE6 165 aa5.61□□□□□ -1.51
SNX6-204ENST00000555541 ATXN2LQ8WWM7 1075 aaKnown RBP5.61□□□□□ -1.51
SNX6-204ENST00000555541 RIOX1Q9H6W3 641 aa5.61□□□□□ -1.51
SNX6-204ENST00000555541 PODXL2Q9NZ53 605 aa5.61□□□□□ -1.51
SNX6-204ENST00000555541 FZD1Q9UP38 647 aa5.61□□□□□ -1.51
SNX6-204ENST00000555541 PTPDC1A2A3K4 754 aa5.6□□□□□ -1.51
SNX6-204ENST00000555541 CFBP00751 764 aa5.6□□□□□ -1.51
SNX6-204ENST00000555541 SPIDRQ14159 915 aa5.6□□□□□ -1.51
SNX6-204ENST00000555541 ZNF460Q14592 562 aa5.6□□□□□ -1.51
SNX6-204ENST00000555541 MFSD5Q6N075 450 aa5.6□□□□□ -1.51
SNX6-204ENST00000555541 DDX53Q86TM3 631 aaKnown RBP5.6□□□□□ -1.51
SNX6-204ENST00000555541 ZNF276Q8N554 614 aa5.6□□□□□ -1.51
SNX6-204ENST00000555541 KIAA1958Q8N8K9 716 aa5.6□□□□□ -1.51
SNX6-204ENST00000555541 PGBD4Q96DM1 585 aa5.6□□□□□ -1.51
SNX6-204ENST00000555541 TUBGCP5Q96RT8 1024 aa5.6□□□□□ -1.51
SNX6-204ENST00000555541 SRPK1Q96SB4 655 aaKnown RBP5.6□□□□□ -1.51
SNX6-204ENST00000555541 B4GALT6Q9UBX8 382 aa5.6□□□□□ -1.51
SNX6-204ENST00000555541 GOLGA6L6A8MZA4 724 aa5.59□□□□□ -1.51
SNX6-204ENST00000555541 MTSS1O43312 755 aa5.59□□□□□ -1.51
SNX6-204ENST00000555541 MFAP3LO75121 409 aa5.59□□□□□ -1.51
SNX6-204ENST00000555541 BCAR1P56945 870 aa5.59□□□□□ -1.51
SNX6-204ENST00000555541 FNDC3BQ53EP0 1204 aaKnown RBP5.59□□□□□ -1.51
SNX6-204ENST00000555541 PRAMEF9Q5VWM5 478 aa5.59□□□□□ -1.51
SNX6-204ENST00000555541 C8orf37Q96NL8 207 aa5.59□□□□□ -1.51
SNX6-204ENST00000555541 ELF4Q99607 663 aaPredicted RBP5.59□□□□□ -1.51
SNX6-204ENST00000555541 OSBPL6Q9BZF3 934 aa5.59□□□□□ -1.51
SNX6-204ENST00000555541 ZNHIT2Q9UHR6 403 aa5.59□□□□□ -1.51
SNX6-204ENST00000555541 RCAN3Q9UKA8 241 aa5.59□□□□□ -1.51
SNX6-204ENST00000555541 TNPO3Q9Y5L0 923 aaKnown RBP5.59□□□□□ -1.51
SNX6-204ENST00000555541 ERBB2P04626 1255 aa5.58□□□□□ -1.52
SNX6-204ENST00000555541 APPP05067 770 aa5.58□□□□□ -1.52
SNX6-204ENST00000555541 ITGB1P05556 798 aa5.58□□□□□ -1.52
SNX6-204ENST00000555541 SLC9A1P19634 815 aa5.58□□□□□ -1.52
SNX6-204ENST00000555541 IGFALSP35858 605 aa5.58□□□□□ -1.52
SNX6-204ENST00000555541 KRTAP5-11Q6L8G4 156 aa5.58□□□□□ -1.52
SNX6-204ENST00000555541 OLFML1Q6UWY5 402 aa5.58□□□□□ -1.52
SNX6-204ENST00000555541 MB21D1Q8N884 522 aa5.58□□□□□ -1.52
SNX6-204ENST00000555541 ST8SIA2Q92186 375 aa5.58□□□□□ -1.52
SNX6-204ENST00000555541 TOR3AQ9H497 397 aa5.58□□□□□ -1.52
SNX6-204ENST00000555541 C14orf93Q9H972 538 aaKnown RBP5.58□□□□□ -1.52
SNX6-204ENST00000555541 COX11Q9Y6N1 276 aa5.58□□□□□ -1.52
SNX6-204ENST00000555541 B4E1Z4 1266 aa5.57□□□□□ -1.52
SNX6-204ENST00000555541 CBX4O00257 560 aa5.57□□□□□ -1.52
SNX6-204ENST00000555541 PRPF6O94906 941 aaKnown RBP5.57□□□□□ -1.52
SNX6-204ENST00000555541 ASLP04424 464 aa5.57□□□□□ -1.52
SNX6-204ENST00000555541 SDSP20132 328 aa5.57□□□□□ -1.52
SNX6-204ENST00000555541 DCAF17Q5H9S7 520 aaPredicted RBP5.57□□□□□ -1.52
SNX6-204ENST00000555541 APBB1IPQ7Z5R6 666 aaPredicted RBP5.57□□□□□ -1.52
SNX6-204ENST00000555541 NME9Q86XW9 330 aa5.57□□□□□ -1.52
SNX6-204ENST00000555541 PIK3C3Q8NEB9 887 aa5.57□□□□□ -1.52
SNX6-204ENST00000555541 ZNF768Q9H5H4 540 aaKnown RBP5.57□□□□□ -1.52
SNX6-204ENST00000555541 ING3Q9NXR8 418 aa5.57□□□□□ -1.52
SNX6-204ENST00000555541 AHRRA9YTQ3 701 aa5.56□□□□□ -1.52
SNX6-204ENST00000555541 H7C1D1 291 aa5.56□□□□□ -1.52
SNX6-204ENST00000555541 DAPK3O43293 454 aa5.56□□□□□ -1.52
SNX6-204ENST00000555541 HOXA3O43365 443 aaPredicted RBP5.56□□□□□ -1.52
SNX6-204ENST00000555541 OPHN1O60890 802 aa5.56□□□□□ -1.52
SNX6-204ENST00000555541 GAAP10253 952 aa5.56□□□□□ -1.52
SNX6-204ENST00000555541 ADCY2Q08462 1091 aa5.56□□□□□ -1.52
SNX6-204ENST00000555541 SQSTM1Q13501 440 aa5.56□□□□□ -1.52
SNX6-204ENST00000555541 FAM214AQ32MH5 1076 aa5.56□□□□□ -1.52
SNX6-204ENST00000555541 KRT40Q6A162 431 aa5.56□□□□□ -1.52
SNX6-204ENST00000555541 MYL10Q9BUA6 226 aa5.56□□□□□ -1.52
SNX6-204ENST00000555541 MTG2Q9H4K7 406 aa5.56□□□□□ -1.52
SNX6-204ENST00000555541 SPO11Q9Y5K1 396 aa5.56□□□□□ -1.52
SNX6-204ENST00000555541 ELL2O00472 640 aaPredicted RBP5.55□□□□□ -1.52
SNX6-204ENST00000555541 IPO13O94829 963 aaKnown RBP5.55□□□□□ -1.52
SNX6-204ENST00000555541 NPEPPSP55786 919 aa5.55□□□□□ -1.52
SNX6-204ENST00000555541 ADCY1Q08828 1119 aa5.55□□□□□ -1.52
SNX6-204ENST00000555541 METTL24Q5JXM2 366 aa5.55□□□□□ -1.52
SNX6-204ENST00000555541 CDCA2Q69YH5 1023 aaPredicted RBP5.55□□□□□ -1.52
SNX6-204ENST00000555541 KIAA1841Q6NSI8 718 aa5.55□□□□□ -1.52
SNX6-204ENST00000555541 LRRC55Q6ZSA7 311 aa5.55□□□□□ -1.52
SNX6-204ENST00000555541 PHYKPLQ8IUZ5 450 aa5.55□□□□□ -1.52
SNX6-204ENST00000555541 PROKR1Q8TCW9 393 aa5.55□□□□□ -1.52
SNX6-204ENST00000555541 RPGRQ92834 1020 aaKnown RBP5.55□□□□□ -1.52
SNX6-204ENST00000555541 ORAI3Q9BRQ5 295 aa5.55□□□□□ -1.52
SNX6-204ENST00000555541 LSM14BQ9BX40 385 aaKnown RBP5.55□□□□□ -1.52
SNX6-204ENST00000555541 CPEB1Q9BZB8 566 aaKnown RBP5.55□□□□□ -1.52
SNX6-204ENST00000555541 R3HDMLQ9H3Y0 253 aa5.55□□□□□ -1.52
SNX6-204ENST00000555541 PCIF1Q9H4Z3 704 aa5.55□□□□□ -1.52
SNX6-204ENST00000555541 ZMAT4Q9H898 229 aa5.55□□□□□ -1.52
SNX6-204ENST00000555541 KANSL2Q9H9L4 492 aa5.55□□□□□ -1.52
SNX6-204ENST00000555541 DKK2Q9UBU2 259 aa5.55□□□□□ -1.52
SNX6-204ENST00000555541 SORCS3Q9UPU3 1222 aa5.55□□□□□ -1.52
SNX6-204ENST00000555541 FAM83GA6ND36 823 aa5.54□□□□□ -1.52
SNX6-204ENST00000555541 HK1P19367 917 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms