RNA–Protein interactions for RNA: ENST00000555537.1

NEK9-206, Transcript of NIMA related kinase 9, humanhuman

TSL 2

Gene NEK9, Length 675 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-206ENST00000555537 TMEM150BA6NC51 233 aa9.46□□□□□ -0.9
NEK9-206ENST00000555537 INPPL1O15357 1258 aa9.46□□□□□ -0.9
NEK9-206ENST00000555537 SGSM2O43147 1006 aa9.46□□□□□ -0.9
NEK9-206ENST00000555537 OATP04181 439 aa9.46□□□□□ -0.9
NEK9-206ENST00000555537 ALDH2P05091 517 aa9.46□□□□□ -0.9
NEK9-206ENST00000555537 SRFP11831 508 aa9.46□□□□□ -0.9
NEK9-206ENST00000555537 LIFRP42702 1097 aa9.46□□□□□ -0.9
NEK9-206ENST00000555537 ATXN1P54253 815 aaKnown RBP9.46□□□□□ -0.9
NEK9-206ENST00000555537 AK2P54819 239 aa9.46□□□□□ -0.9
NEK9-206ENST00000555537 UGCGQ16739 394 aa9.46□□□□□ -0.9
NEK9-206ENST00000555537 DCLRE1AQ6PJP8 1040 aa9.46□□□□□ -0.9
NEK9-206ENST00000555537 ZC3H14Q6PJT7 736 aaKnown RBP9.46□□□□□ -0.9
NEK9-206ENST00000555537 C15orf39Q6ZRI6 1047 aa9.46□□□□□ -0.9
NEK9-206ENST00000555537 KSR1Q8IVT5 923 aa9.46□□□□□ -0.9
NEK9-206ENST00000555537 GJA10Q969M2 543 aa9.46□□□□□ -0.9
NEK9-206ENST00000555537 FDXACB1Q9BRP7 624 aaPredicted RBP9.46□□□□□ -0.9
NEK9-206ENST00000555537 GCOM2Q9BZD3 368 aaPredicted RBP9.46□□□□□ -0.9
NEK9-206ENST00000555537 CHST12Q9NRB3 414 aa9.46□□□□□ -0.9
NEK9-206ENST00000555537 MRPL17Q9NRX2 175 aaKnown RBP9.46□□□□□ -0.9
NEK9-206ENST00000555537 NRBP2Q9NSY0 501 aa9.46□□□□□ -0.9
NEK9-206ENST00000555537 TBC1D22BQ9NU19 505 aa9.46□□□□□ -0.9
NEK9-206ENST00000555537 FAM105AQ9NUU6 356 aa9.46□□□□□ -0.9
NEK9-206ENST00000555537 TCEAL9Q9UHQ7 104 aa9.46□□□□□ -0.9
NEK9-206ENST00000555537 PIN4Q9Y237 131 aaKnown RBP9.46□□□□□ -0.9
NEK9-206ENST00000555537 FAN1Q9Y2M0 1017 aa9.46□□□□□ -0.9
NEK9-206ENST00000555537 CNTNAP5Q8WYK1 1306 aa9.46□□□□□ -0.9
NEK9-206ENST00000555537 COL4A3Q01955 1670 aa9.45□□□□□ -0.9
NEK9-206ENST00000555537 FRYLO94915 3013 aa9.45□□□□□ -0.9
NEK9-206ENST00000555537 NRP1O14786 923 aa9.45□□□□□ -0.9
NEK9-206ENST00000555537 TEX28O15482 410 aa9.45□□□□□ -0.9
NEK9-206ENST00000555537 CHMP2AO43633 222 aa9.45□□□□□ -0.9
NEK9-206ENST00000555537 POMCP01189 267 aa9.45□□□□□ -0.9
NEK9-206ENST00000555537 CYP3A4P08684 503 aa9.45□□□□□ -0.9
NEK9-206ENST00000555537 LAMP2P13473 410 aa9.45□□□□□ -0.9
NEK9-206ENST00000555537 GPC5P78333 572 aa9.45□□□□□ -0.9
NEK9-206ENST00000555537 PRKCEQ02156 737 aa9.45□□□□□ -0.9
NEK9-206ENST00000555537 FUT2Q10981 343 aa9.45□□□□□ -0.9
NEK9-206ENST00000555537 AP3B2Q13367 1082 aa9.45□□□□□ -0.9
NEK9-206ENST00000555537 NONOQ15233 471 aaKnown RBP eCLIP9.45□□□□□ -0.9
NEK9-206ENST00000555537 MTERF2Q49AM1 385 aa9.45□□□□□ -0.9
NEK9-206ENST00000555537 PRR16Q569H4 304 aa9.45□□□□□ -0.9
NEK9-206ENST00000555537 VARS2Q5ST30 1063 aaKnown RBP9.45□□□□□ -0.9
NEK9-206ENST00000555537 PHLDB3Q6NSJ2 640 aa9.45□□□□□ -0.9
NEK9-206ENST00000555537 AGMOQ6ZNB7 445 aa9.45□□□□□ -0.9
NEK9-206ENST00000555537 PALB2Q86YC2 1186 aa9.45□□□□□ -0.9
NEK9-206ENST00000555537 SMAP1Q8IYB5 467 aaPredicted RBP9.45□□□□□ -0.9
NEK9-206ENST00000555537 CRYGNQ8WXF5 182 aa9.45□□□□□ -0.9
NEK9-206ENST00000555537 SMG7Q92540 1137 aaKnown RBP9.45□□□□□ -0.9
NEK9-206ENST00000555537 ZNF707Q96C28 371 aaPredicted RBP9.45□□□□□ -0.9
NEK9-206ENST00000555537 FAM167AQ96KS9 214 aa9.45□□□□□ -0.9
NEK9-206ENST00000555537 TCEANC2Q96MN5 208 aa9.45□□□□□ -0.9
NEK9-206ENST00000555537 FAM193BQ96PV7 902 aaPredicted RBP9.45□□□□□ -0.9
NEK9-206ENST00000555537 MTA3Q9BTC8 594 aa9.45□□□□□ -0.9
NEK9-206ENST00000555537 ARHGEF3Q9NR81 526 aa9.45□□□□□ -0.9
NEK9-206ENST00000555537 DISC1Q9NRI5 854 aa9.45□□□□□ -0.9
NEK9-206ENST00000555537 NCDNQ9UBB6 729 aa9.45□□□□□ -0.9
NEK9-206ENST00000555537 EPS15L1Q9UBC2 864 aa9.45□□□□□ -0.9
NEK9-206ENST00000555537 MTF2Q9Y483 593 aaPredicted RBP9.45□□□□□ -0.9
NEK9-206ENST00000555537 CLUHO75153 1309 aa9.45□□□□□ -0.9
NEK9-206ENST00000555537 MYH9P35579 1960 aaKnown RBP9.44□□□□□ -0.9
NEK9-206ENST00000555537 GVINP1Q7Z2Y8 2422 aa9.44□□□□□ -0.9
NEK9-206ENST00000555537 CACNA1AO00555 2505 aa9.44□□□□□ -0.9
NEK9-206ENST00000555537 F8W810 466 aa9.44□□□□□ -0.9
NEK9-206ENST00000555537 SLC27A2O14975 620 aa9.44□□□□□ -0.9
NEK9-206ENST00000555537 KINO60870 393 aaKnown RBP9.44□□□□□ -0.9
NEK9-206ENST00000555537 SNW1Q13573 536 aaKnown RBP9.44□□□□□ -0.9
NEK9-206ENST00000555537 TARBP2Q15633 366 aaKnown RBP9.44□□□□□ -0.9
NEK9-206ENST00000555537 SYNE3Q6ZMZ3 975 aa9.44□□□□□ -0.9
NEK9-206ENST00000555537 GET4Q7L5D6 327 aaPredicted RBP9.44□□□□□ -0.9
NEK9-206ENST00000555537 CATSPER4Q7RTX7 472 aa9.44□□□□□ -0.9
NEK9-206ENST00000555537 RHPN2Q8IUC4 686 aa9.44□□□□□ -0.9
NEK9-206ENST00000555537 GLYCTKQ8IVS8 523 aa9.44□□□□□ -0.9
NEK9-206ENST00000555537 CMASQ8NFW8 434 aaPredicted RBP9.44□□□□□ -0.9
NEK9-206ENST00000555537 PJA1Q8NG27 643 aa9.44□□□□□ -0.9
NEK9-206ENST00000555537 EXOC6Q8TAG9 804 aa9.44□□□□□ -0.9
NEK9-206ENST00000555537 STAMQ92783 540 aa9.44□□□□□ -0.9
NEK9-206ENST00000555537 B3GALT6Q96L58 329 aa9.44□□□□□ -0.9
NEK9-206ENST00000555537 RPS6KC1Q96S38 1066 aa9.44□□□□□ -0.9
NEK9-206ENST00000555537 PIDD1Q9HB75 910 aa9.44□□□□□ -0.9
NEK9-206ENST00000555537 SPATA6Q9NWH7 488 aaPredicted RBP9.44□□□□□ -0.9
NEK9-206ENST00000555537 BARHL2Q9NY43 387 aa9.44□□□□□ -0.9
NEK9-206ENST00000555537 SUCLA2Q9P2R7 463 aaPredicted RBP9.44□□□□□ -0.9
NEK9-206ENST00000555537 BRPF3Q9ULD4 1205 aa9.44□□□□□ -0.9
NEK9-206ENST00000555537 PRG3Q9Y2Y8 225 aaPredicted RBP9.44□□□□□ -0.9
NEK9-206ENST00000555537 PCDHB2Q9Y5E7 798 aa9.44□□□□□ -0.9
NEK9-206ENST00000555537 NUMBLQ9Y6R0 609 aa9.44□□□□□ -0.9
NEK9-206ENST00000555537 WDR87Q6ZQQ6 2873 aa9.44□□□□□ -0.9
NEK9-206ENST00000555537 ZNF292O60281 2723 aa9.43□□□□□ -0.9
NEK9-206ENST00000555537 WDR64B1ANS9 1081 aa9.43□□□□□ -0.9
NEK9-206ENST00000555537 ANHXE9PGG2 379 aa9.43□□□□□ -0.9
NEK9-206ENST00000555537 EDIL3O43854 480 aa9.43□□□□□ -0.9
NEK9-206ENST00000555537 GAS2O43903 313 aaKnown RBP9.43□□□□□ -0.9
NEK9-206ENST00000555537 ZNF623O75123 536 aa9.43□□□□□ -0.9
NEK9-206ENST00000555537 GLUD1P00367 558 aa9.43□□□□□ -0.9
NEK9-206ENST00000555537 SOD2P04179 222 aa9.43□□□□□ -0.9
NEK9-206ENST00000555537 SKIP12755 728 aa9.43□□□□□ -0.9
NEK9-206ENST00000555537 CD72P21854 359 aa9.43□□□□□ -0.9
NEK9-206ENST00000555537 OR1G1P47890 313 aa9.43□□□□□ -0.9
NEK9-206ENST00000555537 STARD6P59095 220 aa9.43□□□□□ -0.9
NEK9-206ENST00000555537 CSTF1Q05048 431 aaKnown RBP9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms