RNA–Protein interactions for RNA: ENST00000555221.3

CKS1BP1-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 1, humanhuman

BASIC

Gene CKS1BP1, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP1-201ENST00000555221 A0A0A6YYK5 440 aaPredicted RBP7.01□□□□□ -1.29
CKS1BP1-201ENST00000555221 KLHL18O94889 574 aa7.01□□□□□ -1.29
CKS1BP1-201ENST00000555221 POU2F2P09086 479 aa7.01□□□□□ -1.29
CKS1BP1-201ENST00000555221 PI3P19957 117 aa7.01□□□□□ -1.29
CKS1BP1-201ENST00000555221 KCNQ1P51787 676 aa7.01□□□□□ -1.29
CKS1BP1-201ENST00000555221 MGAT5Q09328 741 aa7.01□□□□□ -1.29
CKS1BP1-201ENST00000555221 SSPNQ14714 243 aa7.01□□□□□ -1.29
CKS1BP1-201ENST00000555221 ATG14Q6ZNE5 492 aa7.01□□□□□ -1.29
CKS1BP1-201ENST00000555221 REXO1L1PQ8IX06 675 aa7.01□□□□□ -1.29
CKS1BP1-201ENST00000555221 CCAR1Q8IX12 1150 aaKnown RBP7.01□□□□□ -1.29
CKS1BP1-201ENST00000555221 BCL6BQ8N143 479 aaPredicted RBP7.01□□□□□ -1.29
CKS1BP1-201ENST00000555221 GLB1L3Q8NCI6 653 aaPredicted RBP7.01□□□□□ -1.29
CKS1BP1-201ENST00000555221 COA7Q96BR5 231 aa7.01□□□□□ -1.29
CKS1BP1-201ENST00000555221 LRGUKQ96M69 825 aa7.01□□□□□ -1.29
CKS1BP1-201ENST00000555221 SLC38A3Q99624 504 aa7.01□□□□□ -1.29
CKS1BP1-201ENST00000555221 SOX7Q9BT81 388 aa7.01□□□□□ -1.29
CKS1BP1-201ENST00000555221 GABBR1Q9UBS5 961 aa7.01□□□□□ -1.29
CKS1BP1-201ENST00000555221 DNAI1Q9UI46 699 aa7.01□□□□□ -1.29
CKS1BP1-201ENST00000555221 MAGEL2Q9UJ55 1249 aa7.01□□□□□ -1.29
CKS1BP1-201ENST00000555221 CDC42EP3Q9UKI2 254 aa7.01□□□□□ -1.29
CKS1BP1-201ENST00000555221 KCTD3Q9Y597 815 aa7.01□□□□□ -1.29
CKS1BP1-201ENST00000555221 VSTM5A8MXK1 200 aa7□□□□□ -1.29
CKS1BP1-201ENST00000555221 DDX3XO00571 662 aaKnown RBP eCLIP7□□□□□ -1.29
CKS1BP1-201ENST00000555221 WASP42768 502 aa7□□□□□ -1.29
CKS1BP1-201ENST00000555221 MCAMP43121 646 aa7□□□□□ -1.29
CKS1BP1-201ENST00000555221 MEOX1P50221 254 aa7□□□□□ -1.29
CKS1BP1-201ENST00000555221 ZNF385BQ569K4 471 aa7□□□□□ -1.29
CKS1BP1-201ENST00000555221 KLHDC10Q6PID8 442 aa7□□□□□ -1.29
CKS1BP1-201ENST00000555221 DGKHQ86XP1 1220 aa7□□□□□ -1.29
CKS1BP1-201ENST00000555221 CCDC146Q8IYE0 955 aa7□□□□□ -1.29
CKS1BP1-201ENST00000555221 RTKN2Q8IZC4 609 aa7□□□□□ -1.29
CKS1BP1-201ENST00000555221 UNC5BQ8IZJ1 945 aa7□□□□□ -1.29
CKS1BP1-201ENST00000555221 BHLHE22Q8NFJ8 381 aaPredicted RBP7□□□□□ -1.29
CKS1BP1-201ENST00000555221 NKD2Q969F2 451 aaPredicted RBP7□□□□□ -1.29
CKS1BP1-201ENST00000555221 EPB41L4AQ9HCS5 686 aaPredicted RBP7□□□□□ -1.29
CKS1BP1-201ENST00000555221 ANLNQ9NQW6 1124 aa7□□□□□ -1.29
CKS1BP1-201ENST00000555221 SCOCQ9UIL1 159 aa7□□□□□ -1.29
CKS1BP1-201ENST00000555221 DNM3Q9UQ16 869 aa7□□□□□ -1.29
CKS1BP1-201ENST00000555221 CCDC194A0A1B0GVG4 234 aa6.99□□□□□ -1.29
CKS1BP1-201ENST00000555221 A0A1W2PR48 441 aa6.99□□□□□ -1.29
CKS1BP1-201ENST00000555221 SH3D21A4FU49 640 aa6.99□□□□□ -1.29
CKS1BP1-201ENST00000555221 DAPK3O43293 454 aa6.99□□□□□ -1.29
CKS1BP1-201ENST00000555221 AP1G1O43747 822 aa6.99□□□□□ -1.29
CKS1BP1-201ENST00000555221 KRT18P05783 430 aaKnown RBP6.99□□□□□ -1.29
CKS1BP1-201ENST00000555221 GSPT1P15170 499 aaKnown RBP6.99□□□□□ -1.29
CKS1BP1-201ENST00000555221 STAT5BP51692 787 aa6.99□□□□□ -1.29
CKS1BP1-201ENST00000555221 DLX2Q07687 328 aaPredicted RBP6.99□□□□□ -1.29
CKS1BP1-201ENST00000555221 ATAT1Q5SQI0 421 aa6.99□□□□□ -1.29
CKS1BP1-201ENST00000555221 TRIM68Q6AZZ1 485 aa6.99□□□□□ -1.29
CKS1BP1-201ENST00000555221 LILRA6Q6PI73 481 aa6.99□□□□□ -1.29
CKS1BP1-201ENST00000555221 Q6ZUG5 572 aa6.99□□□□□ -1.29
CKS1BP1-201ENST00000555221 USP45Q70EL2 814 aa6.99□□□□□ -1.29
CKS1BP1-201ENST00000555221 NUDT10Q8NFP7 164 aa6.99□□□□□ -1.29
CKS1BP1-201ENST00000555221 NUDT11Q96G61 164 aa6.99□□□□□ -1.29
CKS1BP1-201ENST00000555221 YTHDC1Q96MU7 727 aaKnown RBP6.99□□□□□ -1.29
CKS1BP1-201ENST00000555221 MAP3K14Q99558 947 aa6.99□□□□□ -1.29
CKS1BP1-201ENST00000555221 TMEM168Q9H0V1 697 aa6.99□□□□□ -1.29
CKS1BP1-201ENST00000555221 SLC12A5Q9H2X9 1139 aa6.99□□□□□ -1.29
CKS1BP1-201ENST00000555221 BARX1Q9HBU1 254 aaPredicted RBP6.99□□□□□ -1.29
CKS1BP1-201ENST00000555221 RBM12Q9NTZ6 932 aaKnown RBP6.99□□□□□ -1.29
CKS1BP1-201ENST00000555221 OBP2AQ9NY56 170 aa6.99□□□□□ -1.29
CKS1BP1-201ENST00000555221 SERPINB13Q9UIV8 391 aa6.99□□□□□ -1.29
CKS1BP1-201ENST00000555221 FAM171A2A8MVW0 826 aa6.98□□□□□ -1.29
CKS1BP1-201ENST00000555221 PHF2O75151 1096 aa6.98□□□□□ -1.29
CKS1BP1-201ENST00000555221 LY86O95711 162 aa6.98□□□□□ -1.29
CKS1BP1-201ENST00000555221 CYP1A1P04798 512 aaPredicted RBP6.98□□□□□ -1.29
CKS1BP1-201ENST00000555221 LTA4HP09960 611 aaKnown RBP6.98□□□□□ -1.29
CKS1BP1-201ENST00000555221 PDCP20941 246 aa6.98□□□□□ -1.29
CKS1BP1-201ENST00000555221 SARSP49591 514 aaKnown RBP6.98□□□□□ -1.29
CKS1BP1-201ENST00000555221 CD69Q07108 199 aa6.98□□□□□ -1.29
CKS1BP1-201ENST00000555221 VWA3BQ502W6 1294 aa6.98□□□□□ -1.29
CKS1BP1-201ENST00000555221 ARHGAP29Q52LW3 1261 aa6.98□□□□□ -1.29
CKS1BP1-201ENST00000555221 MIGA2Q7L4E1 593 aa6.98□□□□□ -1.29
CKS1BP1-201ENST00000555221 GPR156Q8NFN8 814 aa6.98□□□□□ -1.29
CKS1BP1-201ENST00000555221 SLC35G2Q8TBE7 412 aa6.98□□□□□ -1.29
CKS1BP1-201ENST00000555221 NRG4Q8WWG1 115 aa6.98□□□□□ -1.29
CKS1BP1-201ENST00000555221 LPPQ93052 612 aa6.98□□□□□ -1.29
CKS1BP1-201ENST00000555221 HPS3Q969F9 1004 aa6.98□□□□□ -1.29
CKS1BP1-201ENST00000555221 HDAC10Q969S8 669 aa6.98□□□□□ -1.29
CKS1BP1-201ENST00000555221 RUNDC1Q96C34 613 aa6.98□□□□□ -1.29
CKS1BP1-201ENST00000555221 AJUBAQ96IF1 538 aa6.98□□□□□ -1.29
CKS1BP1-201ENST00000555221 UIMC1Q96RL1 719 aa6.98□□□□□ -1.29
CKS1BP1-201ENST00000555221 CARD11Q9BXL7 1154 aa6.98□□□□□ -1.29
CKS1BP1-201ENST00000555221 GTPBP4Q9BZE4 634 aaKnown RBP6.98□□□□□ -1.29
CKS1BP1-201ENST00000555221 KATNBL1Q9H079 304 aa6.98□□□□□ -1.29
CKS1BP1-201ENST00000555221 C1orf112Q9NSG2 853 aa6.98□□□□□ -1.29
CKS1BP1-201ENST00000555221 SMG5Q9UPR3 1016 aaKnown RBP6.98□□□□□ -1.29
CKS1BP1-201ENST00000555221 RPTORQ8N122 1335 aa6.98□□□□□ -1.29
CKS1BP1-201ENST00000555221 CCDC154A6NI56 674 aa6.97□□□□□ -1.29
CKS1BP1-201ENST00000555221 HTRA2O43464 458 aaPredicted RBP6.97□□□□□ -1.29
CKS1BP1-201ENST00000555221 TSPAN15O95858 294 aa6.97□□□□□ -1.29
CKS1BP1-201ENST00000555221 RPLP2P05387 115 aaKnown RBP6.97□□□□□ -1.29
CKS1BP1-201ENST00000555221 MGAT2Q10469 447 aa6.97□□□□□ -1.29
CKS1BP1-201ENST00000555221 GBX1Q14549 363 aa6.97□□□□□ -1.29
CKS1BP1-201ENST00000555221 FAM26FQ5R3K3 315 aa6.97□□□□□ -1.29
CKS1BP1-201ENST00000555221 B3GNT9Q6UX72 402 aa6.97□□□□□ -1.29
CKS1BP1-201ENST00000555221 CATIPQ7Z7H3 387 aa6.97□□□□□ -1.29
CKS1BP1-201ENST00000555221 KLHL36Q8N4N3 616 aa6.97□□□□□ -1.29
CKS1BP1-201ENST00000555221 ZNF526Q8TF50 670 aaPredicted RBP6.97□□□□□ -1.29
CKS1BP1-201ENST00000555221 RIN2Q8WYP3 895 aaPredicted RBP6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms