RNA–Protein interactions for RNA: ENST00000554997.1

SYNE2-215, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2

Gene SYNE2, Length 711 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-215ENST00000554997 PCDHB13Q9Y5F0 798 aa11.25□□□□□ -0.61
SYNE2-215ENST00000554997 TRPV2Q9Y5S1 764 aa11.25□□□□□ -0.61
SYNE2-215ENST00000554997 CDY2AQ9Y6F7 541 aa11.25□□□□□ -0.61
SYNE2-215ENST00000554997 TRIM43BA6NCK2 446 aa11.24□□□□□ -0.61
SYNE2-215ENST00000554997 LRRIQ4A6NIV6 560 aa11.24□□□□□ -0.61
SYNE2-215ENST00000554997 SLC16A4O15374 487 aa11.24□□□□□ -0.61
SYNE2-215ENST00000554997 EVI5O60447 810 aa11.24□□□□□ -0.61
SYNE2-215ENST00000554997 TIMP1P01033 207 aa11.24□□□□□ -0.61
SYNE2-215ENST00000554997 DARSP14868 501 aaKnown RBP11.24□□□□□ -0.61
SYNE2-215ENST00000554997 NMT1P30419 496 aaKnown RBP11.24□□□□□ -0.61
SYNE2-215ENST00000554997 GTF2BQ00403 316 aa11.24□□□□□ -0.61
SYNE2-215ENST00000554997 STK4Q13043 487 aa11.24□□□□□ -0.61
SYNE2-215ENST00000554997 FAM26FQ5R3K3 315 aa11.24□□□□□ -0.61
SYNE2-215ENST00000554997 ZNF658Q5TYW1 1059 aaPredicted RBP11.24□□□□□ -0.61
SYNE2-215ENST00000554997 LRRC8DQ7L1W4 858 aa11.24□□□□□ -0.61
SYNE2-215ENST00000554997 ZBTB8OSQ8IWT0 167 aa11.24□□□□□ -0.61
SYNE2-215ENST00000554997 TRIML1Q8N9V2 468 aa11.24□□□□□ -0.61
SYNE2-215ENST00000554997 ZNF507Q8TCN5 953 aa11.24□□□□□ -0.61
SYNE2-215ENST00000554997 HPS3Q969F9 1004 aa11.24□□□□□ -0.61
SYNE2-215ENST00000554997 TRIM43Q96BQ3 446 aaPredicted RBP11.24□□□□□ -0.61
SYNE2-215ENST00000554997 ZNF668Q96K58 619 aaPredicted RBP11.24□□□□□ -0.61
SYNE2-215ENST00000554997 FZD8Q9H461 694 aa11.24□□□□□ -0.61
SYNE2-215ENST00000554997 SLC39A2Q9NP94 309 aa11.24□□□□□ -0.61
SYNE2-215ENST00000554997 TBC1D7Q9P0N9 293 aa11.24□□□□□ -0.61
SYNE2-215ENST00000554997 ARHGAP28Q9P2N2 729 aa11.24□□□□□ -0.61
SYNE2-215ENST00000554997 MAN1B1Q9UKM7 699 aa11.24□□□□□ -0.61
SYNE2-215ENST00000554997 GINS2Q9Y248 185 aa11.24□□□□□ -0.61
SYNE2-215ENST00000554997 PHLPP2Q6ZVD8 1323 aa11.24□□□□□ -0.61
SYNE2-215ENST00000554997 CYP2C18P33260 490 aa11.23□□□□□ -0.61
SYNE2-215ENST00000554997 MBTD1Q05BQ5 628 aa11.23□□□□□ -0.61
SYNE2-215ENST00000554997 ALCAMQ13740 583 aa11.23□□□□□ -0.61
SYNE2-215ENST00000554997 MORC3Q14149 939 aa11.23□□□□□ -0.61
SYNE2-215ENST00000554997 FAM187BQ17R55 369 aa11.23□□□□□ -0.61
SYNE2-215ENST00000554997 ZC2HC1CQ53FD0 456 aaPredicted RBP11.23□□□□□ -0.61
SYNE2-215ENST00000554997 STXBP4Q6ZWJ1 553 aa11.23□□□□□ -0.61
SYNE2-215ENST00000554997 EPM2AIP1Q7L775 607 aaPredicted RBP11.23□□□□□ -0.61
SYNE2-215ENST00000554997 TMEM40Q8WWA1 233 aa11.23□□□□□ -0.61
SYNE2-215ENST00000554997 DPF3Q92784 378 aa11.23□□□□□ -0.61
SYNE2-215ENST00000554997 SCLT1Q96NL6 688 aa11.23□□□□□ -0.61
SYNE2-215ENST00000554997 PPP1R16BQ96T49 567 aa11.23□□□□□ -0.61
SYNE2-215ENST00000554997 OSMRQ99650 979 aa11.23□□□□□ -0.61
SYNE2-215ENST00000554997 MINDY3Q9H8M7 445 aa11.23□□□□□ -0.61
SYNE2-215ENST00000554997 PRKAG2Q9UGJ0 569 aa11.23□□□□□ -0.61
SYNE2-215ENST00000554997 TBX20Q9UMR3 447 aa11.23□□□□□ -0.61
SYNE2-215ENST00000554997 WDR81Q562E7 1941 aa11.23□□□□□ -0.61
SYNE2-215ENST00000554997 DENND3A2RUS2 1198 aa11.22□□□□□ -0.61
SYNE2-215ENST00000554997 INO80B-WBP1J3KQ70 363 aa11.22□□□□□ -0.61
SYNE2-215ENST00000554997 ACKR2O00590 384 aa11.22□□□□□ -0.61
SYNE2-215ENST00000554997 GPR182O15218 404 aa11.22□□□□□ -0.61
SYNE2-215ENST00000554997 EIF3DO15371 548 aaKnown RBP eCLIP11.22□□□□□ -0.61
SYNE2-215ENST00000554997 PPP1R37O75864 691 aa11.22□□□□□ -0.61
SYNE2-215ENST00000554997 KIF20AO95235 890 aa11.22□□□□□ -0.61
SYNE2-215ENST00000554997 GCNT3O95395 438 aa11.22□□□□□ -0.61
SYNE2-215ENST00000554997 CTSHP09668 335 aa11.22□□□□□ -0.61
SYNE2-215ENST00000554997 RAG1P15918 1043 aa11.22□□□□□ -0.61
SYNE2-215ENST00000554997 BMP6P22004 513 aa11.22□□□□□ -0.61
SYNE2-215ENST00000554997 RFC2P35250 354 aa11.22□□□□□ -0.61
SYNE2-215ENST00000554997 RGS19P49795 217 aa11.22□□□□□ -0.61
SYNE2-215ENST00000554997 CCL23P55773 120 aa11.22□□□□□ -0.61
SYNE2-215ENST00000554997 NCBP1Q09161 790 aaKnown RBP11.22□□□□□ -0.61
SYNE2-215ENST00000554997 LPIN1Q14693 890 aa11.22□□□□□ -0.61
SYNE2-215ENST00000554997 GPNMBQ14956 572 aa11.22□□□□□ -0.61
SYNE2-215ENST00000554997 MAPK6Q16659 721 aa11.22□□□□□ -0.61
SYNE2-215ENST00000554997 COBLL1Q53SF7 1204 aa11.22□□□□□ -0.61
SYNE2-215ENST00000554997 UMODL1Q5DID0 1318 aa11.22□□□□□ -0.61
SYNE2-215ENST00000554997 FBXO47Q5MNV8 452 aa11.22□□□□□ -0.61
SYNE2-215ENST00000554997 ISM2Q6H9L7 571 aa11.22□□□□□ -0.61
SYNE2-215ENST00000554997 MFSD5Q6N075 450 aa11.22□□□□□ -0.61
SYNE2-215ENST00000554997 SASS6Q6UVJ0 657 aa11.22□□□□□ -0.61
SYNE2-215ENST00000554997 ADGRA3Q8IWK6 1321 aa11.22□□□□□ -0.61
SYNE2-215ENST00000554997 HVCN1Q96D96 273 aa11.22□□□□□ -0.61
SYNE2-215ENST00000554997 PRIMPOLQ96LW4 560 aa11.22□□□□□ -0.61
SYNE2-215ENST00000554997 KIFC3Q9BVG8 833 aa11.22□□□□□ -0.61
SYNE2-215ENST00000554997 CCDC113Q9H0I3 377 aa11.22□□□□□ -0.61
SYNE2-215ENST00000554997 TMEM206Q9H813 350 aa11.22□□□□□ -0.61
SYNE2-215ENST00000554997 PRDM5Q9NQX1 630 aaPredicted RBP11.22□□□□□ -0.61
SYNE2-215ENST00000554997 CHST12Q9NRB3 414 aa11.22□□□□□ -0.61
SYNE2-215ENST00000554997 PRMT7Q9NVM4 692 aaPredicted RBP11.22□□□□□ -0.61
SYNE2-215ENST00000554997 NOC2LQ9Y3T9 749 aaKnown RBP11.22□□□□□ -0.61
SYNE2-215ENST00000554997 K7ENM7 598 aa11.21□□□□□ -0.61
SYNE2-215ENST00000554997 BIN1O00499 593 aa11.21□□□□□ -0.61
SYNE2-215ENST00000554997 NBNO60934 754 aa11.21□□□□□ -0.61
SYNE2-215ENST00000554997 CSDE1O75534 798 aaKnown RBP11.21□□□□□ -0.61
SYNE2-215ENST00000554997 RPS6KA5O75582 802 aa11.21□□□□□ -0.61
SYNE2-215ENST00000554997 CXCL10P02778 98 aa11.21□□□□□ -0.61
SYNE2-215ENST00000554997 MYBP10242 640 aa11.21□□□□□ -0.61
SYNE2-215ENST00000554997 SFPQP23246 707 aaKnown RBP eCLIP11.21□□□□□ -0.61
SYNE2-215ENST00000554997 ITGB8P26012 769 aa11.21□□□□□ -0.61
SYNE2-215ENST00000554997 AXLP30530 894 aa11.21□□□□□ -0.61
SYNE2-215ENST00000554997 PPP1R2P41236 205 aa11.21□□□□□ -0.61
SYNE2-215ENST00000554997 CASP5P51878 434 aa11.21□□□□□ -0.61
SYNE2-215ENST00000554997 STRN3Q13033 797 aa11.21□□□□□ -0.61
SYNE2-215ENST00000554997 MBTPS1Q14703 1052 aa11.21□□□□□ -0.61
SYNE2-215ENST00000554997 AMHR2Q16671 573 aa11.21□□□□□ -0.61
SYNE2-215ENST00000554997 BMT2Q1RMZ1 405 aa11.21□□□□□ -0.61
SYNE2-215ENST00000554997 L1TD1Q5T7N2 865 aaKnown RBP11.21□□□□□ -0.61
SYNE2-215ENST00000554997 TSHZ1Q6ZSZ6 1077 aa11.21□□□□□ -0.61
SYNE2-215ENST00000554997 TAS1R3Q7RTX0 852 aa11.21□□□□□ -0.61
SYNE2-215ENST00000554997 C7orf61Q8IZ16 206 aa11.21□□□□□ -0.61
SYNE2-215ENST00000554997 MYOCDQ8IZQ8 938 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms