RNA–Protein interactions for RNA: ENST00000554901.1

SPTLC2-203, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 1 (best)

Gene SPTLC2, Length 1,518 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-203ENST00000554901 TMEM134Q9H6X4 195 aa18.13■□□□□ 0.49
SPTLC2-203ENST00000554901 PCDHA5Q9Y5H7 936 aa18.13■□□□□ 0.49
SPTLC2-203ENST00000554901 NR2E3Q9Y5X4 410 aa18.13■□□□□ 0.49
SPTLC2-203ENST00000554901 ALPK3Q96L96 1907 aa18.13■□□□□ 0.49
SPTLC2-203ENST00000554901 KMT5BQ4FZB7 885 aa18.13■□□□□ 0.49
SPTLC2-203ENST00000554901 FBXO47Q5MNV8 452 aa18.13■□□□□ 0.49
SPTLC2-203ENST00000554901 FAM26FQ5R3K3 315 aa18.13■□□□□ 0.49
SPTLC2-203ENST00000554901 CCDC183Q5T5S1 534 aa18.13■□□□□ 0.49
SPTLC2-203ENST00000554901 MFSD5Q6N075 450 aa18.13■□□□□ 0.49
SPTLC2-203ENST00000554901 STXBP4Q6ZWJ1 553 aa18.13■□□□□ 0.49
SPTLC2-203ENST00000554901 TMEM161BQ8NDZ6 487 aa18.13■□□□□ 0.49
SPTLC2-203ENST00000554901 HVCN1Q96D96 273 aa18.13■□□□□ 0.49
SPTLC2-203ENST00000554901 OSMRQ99650 979 aa18.13■□□□□ 0.49
SPTLC2-203ENST00000554901 PPP1R12CQ9BZL4 782 aa18.13■□□□□ 0.49
SPTLC2-203ENST00000554901 WNT8AQ9H1J5 351 aa18.13■□□□□ 0.49
SPTLC2-203ENST00000554901 KIAA1468Q9P260 1216 aa18.13■□□□□ 0.49
SPTLC2-203ENST00000554901 GINS2Q9Y248 185 aa18.13■□□□□ 0.49
SPTLC2-203ENST00000554901 SFPQP23246 707 aaKnown RBP eCLIP18.12■□□□□ 0.49
SPTLC2-203ENST00000554901 CYP2C18P33260 490 aa18.12■□□□□ 0.49
SPTLC2-203ENST00000554901 CAMK4Q16566 473 aa18.12■□□□□ 0.49
SPTLC2-203ENST00000554901 MAPK6Q16659 721 aa18.12■□□□□ 0.49
SPTLC2-203ENST00000554901 FAM187BQ17R55 369 aa18.12■□□□□ 0.49
SPTLC2-203ENST00000554901 TSHZ1Q6ZSZ6 1077 aa18.12■□□□□ 0.49
SPTLC2-203ENST00000554901 ZNF720Q7Z2F6 126 aa18.12■□□□□ 0.49
SPTLC2-203ENST00000554901 TMEM199Q8N511 208 aa18.12■□□□□ 0.49
SPTLC2-203ENST00000554901 PRIMPOLQ96LW4 560 aa18.12■□□□□ 0.49
SPTLC2-203ENST00000554901 MRPL44Q9H9J2 332 aaKnown RBP18.12■□□□□ 0.49
SPTLC2-203ENST00000554901 CDHR5Q9HBB8 845 aa18.12■□□□□ 0.49
SPTLC2-203ENST00000554901 PCDHB13Q9Y5F0 798 aa18.12■□□□□ 0.49
SPTLC2-203ENST00000554901 UMODL1Q5DID0 1318 aa18.11■□□□□ 0.49
SPTLC2-203ENST00000554901 ADGRA3Q8IWK6 1321 aa18.11■□□□□ 0.49
SPTLC2-203ENST00000554901 K7ENM7 598 aa18.11■□□□□ 0.49
SPTLC2-203ENST00000554901 K7ERI5 159 aa18.11■□□□□ 0.49
SPTLC2-203ENST00000554901 GPR182O15218 404 aa18.11■□□□□ 0.49
SPTLC2-203ENST00000554901 SLC16A4O15374 487 aa18.11■□□□□ 0.49
SPTLC2-203ENST00000554901 GTF2BQ00403 316 aa18.11■□□□□ 0.49
SPTLC2-203ENST00000554901 PPP4R3CPQ6ZMV5 832 aa18.11■□□□□ 0.49
SPTLC2-203ENST00000554901 RBM43Q6ZSC3 357 aaKnown RBP18.11■□□□□ 0.49
SPTLC2-203ENST00000554901 HAUS6Q7Z4H7 955 aa18.11■□□□□ 0.49
SPTLC2-203ENST00000554901 TRIML1Q8N9V2 468 aa18.11■□□□□ 0.49
SPTLC2-203ENST00000554901 TMEM40Q8WWA1 233 aa18.11■□□□□ 0.49
SPTLC2-203ENST00000554901 PPP1R16BQ96T49 567 aa18.11■□□□□ 0.49
SPTLC2-203ENST00000554901 STRA6Q9BX79 667 aa18.11■□□□□ 0.49
SPTLC2-203ENST00000554901 CCDC113Q9H0I3 377 aa18.11■□□□□ 0.49
SPTLC2-203ENST00000554901 FZD8Q9H461 694 aa18.11■□□□□ 0.49
SPTLC2-203ENST00000554901 PRMT7Q9NVM4 692 aaPredicted RBP18.11■□□□□ 0.49
SPTLC2-203ENST00000554901 MYH11P35749 1972 aa18.11■□□□□ 0.49
SPTLC2-203ENST00000554901 DENND3A2RUS2 1198 aa18.1■□□□□ 0.49
SPTLC2-203ENST00000554901 EIF3DO15371 548 aaKnown RBP eCLIP18.1■□□□□ 0.49
SPTLC2-203ENST00000554901 RPS6KA5O75582 802 aa18.1■□□□□ 0.49
SPTLC2-203ENST00000554901 PPP1R37O75864 691 aa18.1■□□□□ 0.49
SPTLC2-203ENST00000554901 CXCL10P02778 98 aa18.1■□□□□ 0.49
SPTLC2-203ENST00000554901 PFKMP08237 780 aa18.1■□□□□ 0.49
SPTLC2-203ENST00000554901 MBTD1Q05BQ5 628 aa18.1■□□□□ 0.49
SPTLC2-203ENST00000554901 LPIN1Q14693 890 aa18.1■□□□□ 0.49
SPTLC2-203ENST00000554901 MBTPS1Q14703 1052 aa18.1■□□□□ 0.49
SPTLC2-203ENST00000554901 TANC1Q9C0D5 1861 aa18.1■□□□□ 0.49
SPTLC2-203ENST00000554901 UBE4BO95155 1302 aa18.09■□□□□ 0.49
SPTLC2-203ENST00000554901 INO80B-WBP1J3KQ70 363 aa18.09■□□□□ 0.49
SPTLC2-203ENST00000554901 KIF20AO95235 890 aa18.09■□□□□ 0.49
SPTLC2-203ENST00000554901 CCL23P55773 120 aa18.09■□□□□ 0.49
SPTLC2-203ENST00000554901 NCBP1Q09161 790 aaKnown RBP18.09■□□□□ 0.49
SPTLC2-203ENST00000554901 STRN3Q13033 797 aa18.09■□□□□ 0.49
SPTLC2-203ENST00000554901 RPUSD2Q8IZ73 545 aaKnown RBP18.09■□□□□ 0.49
SPTLC2-203ENST00000554901 APBB2Q92870 758 aa18.09■□□□□ 0.49
SPTLC2-203ENST00000554901 ZNF668Q96K58 619 aaPredicted RBP18.09■□□□□ 0.49
SPTLC2-203ENST00000554901 KIFC3Q9BVG8 833 aa18.09■□□□□ 0.49
SPTLC2-203ENST00000554901 MINDY3Q9H8M7 445 aa18.09■□□□□ 0.49
SPTLC2-203ENST00000554901 NOC2LQ9Y3T9 749 aaKnown RBP18.09■□□□□ 0.49
SPTLC2-203ENST00000554901 ACKR2O00590 384 aa18.08■□□□□ 0.49
SPTLC2-203ENST00000554901 NBNO60934 754 aa18.08■□□□□ 0.49
SPTLC2-203ENST00000554901 ERLIN2O94905 339 aa18.08■□□□□ 0.49
SPTLC2-203ENST00000554901 GCNT3O95395 438 aa18.08■□□□□ 0.49
SPTLC2-203ENST00000554901 GHRP10912 638 aa18.08■□□□□ 0.49
SPTLC2-203ENST00000554901 ITGB8P26012 769 aa18.08■□□□□ 0.49
SPTLC2-203ENST00000554901 NMT1P30419 496 aaKnown RBP18.08■□□□□ 0.49
SPTLC2-203ENST00000554901 AXLP30530 894 aa18.08■□□□□ 0.49
SPTLC2-203ENST00000554901 PAK2Q13177 524 aa18.08■□□□□ 0.49
SPTLC2-203ENST00000554901 COBLL1Q53SF7 1204 aa18.08■□□□□ 0.49
SPTLC2-203ENST00000554901 ZNF658Q5TYW1 1059 aaPredicted RBP18.08■□□□□ 0.49
SPTLC2-203ENST00000554901 EPM2AIP1Q7L775 607 aaPredicted RBP18.08■□□□□ 0.49
SPTLC2-203ENST00000554901 FAM228AQ86W67 206 aa18.08■□□□□ 0.49
SPTLC2-203ENST00000554901 TMEM63CQ9P1W3 806 aa18.08■□□□□ 0.49
SPTLC2-203ENST00000554901 LETM1O95202 739 aaPredicted RBP18.08■□□□□ 0.48
SPTLC2-203ENST00000554901 PRKCBP05771 671 aa18.08■□□□□ 0.48
SPTLC2-203ENST00000554901 PPP1R2P41236 205 aa18.08■□□□□ 0.48
SPTLC2-203ENST00000554901 STK4Q13043 487 aa18.08■□□□□ 0.48
SPTLC2-203ENST00000554901 PPIGQ13427 754 aaKnown RBP eCLIP18.08■□□□□ 0.48
SPTLC2-203ENST00000554901 GPNMBQ14956 572 aa18.08■□□□□ 0.48
SPTLC2-203ENST00000554901 AMHR2Q16671 573 aa18.08■□□□□ 0.48
SPTLC2-203ENST00000554901 BMT2Q1RMZ1 405 aa18.08■□□□□ 0.48
SPTLC2-203ENST00000554901 PLEKHG4Q58EX7 1191 aa18.08■□□□□ 0.48
SPTLC2-203ENST00000554901 L1TD1Q5T7N2 865 aaKnown RBP18.08■□□□□ 0.48
SPTLC2-203ENST00000554901 CAVIN1Q6NZI2 390 aaKnown RBP18.08■□□□□ 0.48
SPTLC2-203ENST00000554901 CATSPER4Q7RTX7 472 aa18.08■□□□□ 0.48
SPTLC2-203ENST00000554901 MAP4K3Q8IVH8 894 aa18.08■□□□□ 0.48
SPTLC2-203ENST00000554901 ZNF507Q8TCN5 953 aa18.08■□□□□ 0.48
SPTLC2-203ENST00000554901 SEPT8Q92599 483 aa18.08■□□□□ 0.48
SPTLC2-203ENST00000554901 SCLYQ96I15 445 aa18.08■□□□□ 0.48
SPTLC2-203ENST00000554901 FTHL17Q9BXU8 183 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms