RNA–Protein interactions for RNA: ENST00000554350.5

ATXN3-226, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-226ENST00000554350 FRMD5Q7Z6J6 570 aa6.93□□□□□ -1.3
ATXN3-226ENST00000554350 DZIP1Q86YF9 867 aaKnown RBP6.93□□□□□ -1.3
ATXN3-226ENST00000554350 FAM126BQ8IXS8 530 aa6.93□□□□□ -1.3
ATXN3-226ENST00000554350 LRRC56Q8IYG6 542 aaPredicted RBP6.93□□□□□ -1.3
ATXN3-226ENST00000554350 FBXO15Q8NCQ5 510 aaPredicted RBP6.93□□□□□ -1.3
ATXN3-226ENST00000554350 PHC3Q8NDX5 983 aa6.93□□□□□ -1.3
ATXN3-226ENST00000554350 ABHD4Q8TB40 342 aa6.93□□□□□ -1.3
ATXN3-226ENST00000554350 MAML3Q96JK9 1138 aa6.93□□□□□ -1.3
ATXN3-226ENST00000554350 CHAMP1Q96JM3 812 aa6.93□□□□□ -1.3
ATXN3-226ENST00000554350 CRBNQ96SW2 442 aa6.93□□□□□ -1.3
ATXN3-226ENST00000554350 SLC9A7Q96T83 725 aa6.93□□□□□ -1.3
ATXN3-226ENST00000554350 TRAIPQ9BWF2 469 aa6.93□□□□□ -1.3
ATXN3-226ENST00000554350 KRTAP4-2Q9BYR5 136 aa6.93□□□□□ -1.3
ATXN3-226ENST00000554350 ADAMTS10Q9H324 1103 aa6.93□□□□□ -1.3
ATXN3-226ENST00000554350 CEP131Q9UPN4 1083 aa6.93□□□□□ -1.3
ATXN3-226ENST00000554350 ELP1O95163 1332 aa6.93□□□□□ -1.3
ATXN3-226ENST00000554350 KMT2EQ8IZD2 1858 aa6.92□□□□□ -1.3
ATXN3-226ENST00000554350 MYH13Q9UKX3 1938 aa6.92□□□□□ -1.3
ATXN3-226ENST00000554350 MYADML2A6NDP7 307 aa6.92□□□□□ -1.3
ATXN3-226ENST00000554350 ASGR1P07306 291 aa6.92□□□□□ -1.3
ATXN3-226ENST00000554350 ERCC3P19447 782 aa6.92□□□□□ -1.3
ATXN3-226ENST00000554350 HERC6Q8IVU3 1022 aa6.92□□□□□ -1.3
ATXN3-226ENST00000554350 CCDC146Q8IYE0 955 aa6.92□□□□□ -1.3
ATXN3-226ENST00000554350 KIAA2013Q8IYS2 634 aa6.92□□□□□ -1.3
ATXN3-226ENST00000554350 PCSK9Q8NBP7 692 aaKnown RBP6.92□□□□□ -1.3
ATXN3-226ENST00000554350 KCNG4Q8TDN1 519 aa6.92□□□□□ -1.3
ATXN3-226ENST00000554350 CCDC120Q96HB5 630 aa6.92□□□□□ -1.3
ATXN3-226ENST00000554350 MOV10L1Q9BXT6 1211 aaKnown RBP6.92□□□□□ -1.3
ATXN3-226ENST00000554350 CHMP4AQ9BY43 222 aa6.92□□□□□ -1.3
ATXN3-226ENST00000554350 FTOQ9C0B1 505 aaKnown RBP eCLIP6.92□□□□□ -1.3
ATXN3-226ENST00000554350 SPC25Q9HBM1 224 aa6.92□□□□□ -1.3
ATXN3-226ENST00000554350 CNPY2Q9Y2B0 182 aa6.92□□□□□ -1.3
ATXN3-226ENST00000554350 DCHS1Q96JQ0 3298 aa6.91□□□□□ -1.3
ATXN3-226ENST00000554350 GVINP1Q7Z2Y8 2422 aa6.91□□□□□ -1.3
ATXN3-226ENST00000554350 ANKRD33BA6NCL7 494 aa6.91□□□□□ -1.3
ATXN3-226ENST00000554350 UPK3BL1B0FP48 263 aa6.91□□□□□ -1.3
ATXN3-226ENST00000554350 UPK3BL2E5RIL1 263 aa6.91□□□□□ -1.3
ATXN3-226ENST00000554350 TPP2P29144 1249 aaPredicted RBP6.91□□□□□ -1.3
ATXN3-226ENST00000554350 NBL1P41271 181 aa6.91□□□□□ -1.3
ATXN3-226ENST00000554350 KCNJ6P48051 423 aa6.91□□□□□ -1.3
ATXN3-226ENST00000554350 HK2P52789 917 aa6.91□□□□□ -1.3
ATXN3-226ENST00000554350 ZXDAP98168 799 aa6.91□□□□□ -1.3
ATXN3-226ENST00000554350 PDE4BQ07343 736 aa6.91□□□□□ -1.3
ATXN3-226ENST00000554350 PUM1Q14671 1186 aaKnown RBP eCLIP6.91□□□□□ -1.3
ATXN3-226ENST00000554350 SHROOM1Q2M3G4 852 aaPredicted RBP6.91□□□□□ -1.3
ATXN3-226ENST00000554350 MCTP2Q6DN12 878 aa6.91□□□□□ -1.3
ATXN3-226ENST00000554350 CREG2Q8IUH2 290 aa6.91□□□□□ -1.3
ATXN3-226ENST00000554350 CRACR2BQ8N4Y2 399 aaPredicted RBP6.91□□□□□ -1.3
ATXN3-226ENST00000554350 DTWD2Q8NBA8 298 aa6.91□□□□□ -1.3
ATXN3-226ENST00000554350 LINS1Q8NG48 757 aa6.91□□□□□ -1.3
ATXN3-226ENST00000554350 NEK9Q8TD19 979 aa6.91□□□□□ -1.3
ATXN3-226ENST00000554350 NOC4LQ9BVI4 516 aaKnown RBP6.91□□□□□ -1.3
ATXN3-226ENST00000554350 GPR62Q9BZJ7 368 aa6.91□□□□□ -1.3
ATXN3-226ENST00000554350 WNT8AQ9H1J5 351 aa6.91□□□□□ -1.3
ATXN3-226ENST00000554350 CLDND1Q9NY35 253 aa6.91□□□□□ -1.3
ATXN3-226ENST00000554350 PARP2Q9UGN5 583 aa6.91□□□□□ -1.3
ATXN3-226ENST00000554350 NRBP1Q9UHY1 535 aa6.91□□□□□ -1.3
ATXN3-226ENST00000554350 ZHX1Q9UKY1 873 aaPredicted RBP6.91□□□□□ -1.3
ATXN3-226ENST00000554350 FAM184BQ9ULE4 1060 aa6.91□□□□□ -1.3
ATXN3-226ENST00000554350 MYH2Q9UKX2 1941 aa6.91□□□□□ -1.3
ATXN3-226ENST00000554350 MAP1BP46821 2468 aaKnown RBP6.9□□□□□ -1.3
ATXN3-226ENST00000554350 CHD6Q8TD26 2715 aa6.9□□□□□ -1.3
ATXN3-226ENST00000554350 FAM221AA4D161 298 aa6.9□□□□□ -1.3
ATXN3-226ENST00000554350 LCHNA4D1U4 455 aa6.9□□□□□ -1.3
ATXN3-226ENST00000554350 STXBP3O00186 592 aa6.9□□□□□ -1.3
ATXN3-226ENST00000554350 CILPO75339 1184 aa6.9□□□□□ -1.3
ATXN3-226ENST00000554350 PDE8BO95263 885 aa6.9□□□□□ -1.3
ATXN3-226ENST00000554350 CD4P01730 458 aa6.9□□□□□ -1.3
ATXN3-226ENST00000554350 PGK2P07205 417 aa6.9□□□□□ -1.3
ATXN3-226ENST00000554350 PFKMP08237 780 aa6.9□□□□□ -1.3
ATXN3-226ENST00000554350 MED14OSP0DP75 135 aa6.9□□□□□ -1.3
ATXN3-226ENST00000554350 FCER1AP12319 257 aa6.9□□□□□ -1.3
ATXN3-226ENST00000554350 TRHRP34981 398 aaPredicted RBP6.9□□□□□ -1.3
ATXN3-226ENST00000554350 ST13P50502 369 aaKnown RBP6.9□□□□□ -1.3
ATXN3-226ENST00000554350 DAB2P98082 770 aa6.9□□□□□ -1.3
ATXN3-226ENST00000554350 PUM3Q15397 648 aaKnown RBP6.9□□□□□ -1.3
ATXN3-226ENST00000554350 LRRC24Q50LG9 513 aa6.9□□□□□ -1.3
ATXN3-226ENST00000554350 CCDC184Q52MB2 194 aa6.9□□□□□ -1.3
ATXN3-226ENST00000554350 TMEM201Q5SNT2 666 aa6.9□□□□□ -1.3
ATXN3-226ENST00000554350 BNC2Q6ZN30 1099 aaPredicted RBP6.9□□□□□ -1.3
ATXN3-226ENST00000554350 CATSPERGQ6ZRH7 1159 aa6.9□□□□□ -1.3
ATXN3-226ENST00000554350 G2E3Q7L622 706 aa6.9□□□□□ -1.3
ATXN3-226ENST00000554350 C8orf58Q8NAV2 365 aa6.9□□□□□ -1.3
ATXN3-226ENST00000554350 KLHDC9Q8NEP7 349 aa6.9□□□□□ -1.3
ATXN3-226ENST00000554350 PHOSPHO2Q8TCD6 241 aa6.9□□□□□ -1.3
ATXN3-226ENST00000554350 CYB5D2Q8WUJ1 264 aa6.9□□□□□ -1.3
ATXN3-226ENST00000554350 DNAAF4Q8WXU2 420 aa6.9□□□□□ -1.3
ATXN3-226ENST00000554350 TGS1Q96RS0 853 aaKnown RBP6.9□□□□□ -1.3
ATXN3-226ENST00000554350 TINF2Q9BSI4 451 aa6.9□□□□□ -1.3
ATXN3-226ENST00000554350 SPATC1LQ9H0A9 340 aa6.9□□□□□ -1.3
ATXN3-226ENST00000554350 TRPV6Q9H1D0 765 aa6.9□□□□□ -1.3
ATXN3-226ENST00000554350 RPAP3Q9H6T3 665 aaPredicted RBP6.9□□□□□ -1.3
ATXN3-226ENST00000554350 ALG13Q9NP73 1137 aaKnown RBP6.9□□□□□ -1.3
ATXN3-226ENST00000554350 GNL3LQ9NVN8 582 aaKnown RBP6.9□□□□□ -1.3
ATXN3-226ENST00000554350 ABCF2Q9UG63 623 aa6.9□□□□□ -1.3
ATXN3-226ENST00000554350 HERC5Q9UII4 1024 aaKnown RBP6.9□□□□□ -1.3
ATXN3-226ENST00000554350 ZNF236Q9UL36 1845 aa6.9□□□□□ -1.31
ATXN3-226ENST00000554350 LRRN2O75325 713 aa6.89□□□□□ -1.31
ATXN3-226ENST00000554350 ZGLP1P0C6A0 271 aa6.89□□□□□ -1.31
ATXN3-226ENST00000554350 RAC2P15153 192 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms