RNA–Protein interactions for RNA: ENST00000553868.1

SHMT2-208, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 941 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-208ENST00000553868 PLA2G4BP0C869 781 aa16.04■□□□□ 0.16
SHMT2-208ENST00000553868 NBL1P41271 181 aa16.04■□□□□ 0.16
SHMT2-208ENST00000553868 QARSP47897 775 aaKnown RBP16.04■□□□□ 0.16
SHMT2-208ENST00000553868 SARSP49591 514 aaKnown RBP16.04■□□□□ 0.16
SHMT2-208ENST00000553868 CYP4A11Q02928 519 aa16.04■□□□□ 0.16
SHMT2-208ENST00000553868 PTPN11Q06124 597 aaPredicted RBP16.04■□□□□ 0.16
SHMT2-208ENST00000553868 MCM6Q14566 821 aa16.04■□□□□ 0.16
SHMT2-208ENST00000553868 MBTPS1Q14703 1052 aa16.04■□□□□ 0.16
SHMT2-208ENST00000553868 L1TD1Q5T7N2 865 aaKnown RBP16.04■□□□□ 0.16
SHMT2-208ENST00000553868 MIS18BP1Q6P0N0 1132 aa16.04■□□□□ 0.16
SHMT2-208ENST00000553868 POTEGQ6S5H5 508 aa16.04■□□□□ 0.16
SHMT2-208ENST00000553868 FRMD5Q7Z6J6 570 aa16.04■□□□□ 0.16
SHMT2-208ENST00000553868 TPH2Q8IWU9 490 aa16.04■□□□□ 0.16
SHMT2-208ENST00000553868 CCDC155Q8N6L0 562 aa16.04■□□□□ 0.16
SHMT2-208ENST00000553868 ERCC4Q92889 916 aaPredicted RBP16.04■□□□□ 0.16
SHMT2-208ENST00000553868 ATP6V0A1Q93050 837 aa16.04■□□□□ 0.16
SHMT2-208ENST00000553868 FSD2A1L4K1 749 aa16.03■□□□□ 0.16
SHMT2-208ENST00000553868 LOC730098B7Z3J9 87 aa16.03■□□□□ 0.16
SHMT2-208ENST00000553868 GALR2O43603 387 aaPredicted RBP16.03■□□□□ 0.16
SHMT2-208ENST00000553868 SLITRK3O94933 977 aa16.03■□□□□ 0.16
SHMT2-208ENST00000553868 LYPLA2O95372 231 aa16.03■□□□□ 0.16
SHMT2-208ENST00000553868 EYA4O95677 639 aa16.03■□□□□ 0.16
SHMT2-208ENST00000553868 RPN1P04843 607 aaKnown RBP16.03■□□□□ 0.16
SHMT2-208ENST00000553868 SSBP05455 408 aaKnown RBP eCLIP16.03■□□□□ 0.16
SHMT2-208ENST00000553868 UBA1P22314 1058 aaKnown RBP16.03■□□□□ 0.16
SHMT2-208ENST00000553868 PSMC5P62195 406 aa16.03■□□□□ 0.16
SHMT2-208ENST00000553868 CTTNQ14247 550 aaKnown RBP16.03■□□□□ 0.16
SHMT2-208ENST00000553868 KCNB1Q14721 858 aa16.03■□□□□ 0.16
SHMT2-208ENST00000553868 ECM1Q16610 540 aa16.03■□□□□ 0.16
SHMT2-208ENST00000553868 ANO6Q4KMQ2 910 aa16.03■□□□□ 0.16
SHMT2-208ENST00000553868 CNNM4Q6P4Q7 775 aa16.03■□□□□ 0.16
SHMT2-208ENST00000553868 TRAF7Q6Q0C0 670 aa16.03■□□□□ 0.16
SHMT2-208ENST00000553868 METTL7BQ6UX53 244 aa16.03■□□□□ 0.16
SHMT2-208ENST00000553868 GAS2L3Q86XJ1 694 aa16.03■□□□□ 0.16
SHMT2-208ENST00000553868 MLKLQ8NB16 471 aa16.03■□□□□ 0.16
SHMT2-208ENST00000553868 STAMQ92783 540 aa16.03■□□□□ 0.16
SHMT2-208ENST00000553868 WNT8BQ93098 351 aa16.03■□□□□ 0.16
SHMT2-208ENST00000553868 LXNQ9BS40 222 aa16.03■□□□□ 0.16
SHMT2-208ENST00000553868 TRIM9Q9C026 710 aa16.03■□□□□ 0.16
SHMT2-208ENST00000553868 RGL1Q9NZL6 768 aa16.03■□□□□ 0.16
SHMT2-208ENST00000553868 MAN1B1Q9UKM7 699 aa16.03■□□□□ 0.16
SHMT2-208ENST00000553868 CFAP47Q6ZTR5 3102 aa16.02■□□□□ 0.16
SHMT2-208ENST00000553868 PVALEFA0A1B0GWK0 134 aa16.02■□□□□ 0.16
SHMT2-208ENST00000553868 E9PMD0 336 aa16.02■□□□□ 0.16
SHMT2-208ENST00000553868 BIN1O00499 593 aa16.02■□□□□ 0.16
SHMT2-208ENST00000553868 GRM6O15303 877 aa16.02■□□□□ 0.16
SHMT2-208ENST00000553868 LGR5O75473 907 aa16.02■□□□□ 0.16
SHMT2-208ENST00000553868 CCNE2O96020 404 aa16.02■□□□□ 0.16
SHMT2-208ENST00000553868 XRCC6P12956 609 aaKnown RBP eCLIP16.02■□□□□ 0.16
SHMT2-208ENST00000553868 ACTR2P61160 394 aa16.02■□□□□ 0.16
SHMT2-208ENST00000553868 ASIC1P78348 528 aa16.02■□□□□ 0.16
SHMT2-208ENST00000553868 CUL4BQ13620 913 aa16.02■□□□□ 0.16
SHMT2-208ENST00000553868 DHX8Q14562 1220 aaKnown RBP16.02■□□□□ 0.16
SHMT2-208ENST00000553868 CT47A1Q5JQC4 288 aaPredicted RBP16.02■□□□□ 0.16
SHMT2-208ENST00000553868 KCNK18Q7Z418 384 aa16.02■□□□□ 0.16
SHMT2-208ENST00000553868 SYT2Q8N9I0 419 aaPredicted RBP16.02■□□□□ 0.16
SHMT2-208ENST00000553868 FAM200AQ8TCP9 573 aa16.02■□□□□ 0.16
SHMT2-208ENST00000553868 RMDN1Q96DB5 314 aa16.02■□□□□ 0.16
SHMT2-208ENST00000553868 SAMD11Q96NU1 681 aa16.02■□□□□ 0.16
SHMT2-208ENST00000553868 YME1L1Q96TA2 773 aa16.02■□□□□ 0.16
SHMT2-208ENST00000553868 MTRQ99707 1265 aa16.02■□□□□ 0.16
SHMT2-208ENST00000553868 BLZF1Q9H2G9 400 aa16.02■□□□□ 0.16
SHMT2-208ENST00000553868 MLXIPQ9HAP2 919 aa16.02■□□□□ 0.16
SHMT2-208ENST00000553868 DDX41Q9UJV9 622 aaKnown RBP16.02■□□□□ 0.16
SHMT2-208ENST00000553868 BAHCC1Q9P281 2608 aa16.01■□□□□ 0.15
SHMT2-208ENST00000553868 ZNF292O60281 2723 aa16.01■□□□□ 0.15
SHMT2-208ENST00000553868 A6NJR5 290 aa16.01■□□□□ 0.15
SHMT2-208ENST00000553868 NCK2O43639 380 aa16.01■□□□□ 0.15
SHMT2-208ENST00000553868 EFCAB14O75071 495 aa16.01■□□□□ 0.15
SHMT2-208ENST00000553868 UPP2O95045 317 aa16.01■□□□□ 0.15
SHMT2-208ENST00000553868 GGPS1O95749 300 aa16.01■□□□□ 0.15
SHMT2-208ENST00000553868 AMHP03971 560 aa16.01■□□□□ 0.15
SHMT2-208ENST00000553868 KRT18P05783 430 aaKnown RBP16.01■□□□□ 0.15
SHMT2-208ENST00000553868 TXNP10599 105 aaKnown RBP16.01■□□□□ 0.15
SHMT2-208ENST00000553868 ZNF165P49910 485 aa16.01■□□□□ 0.15
SHMT2-208ENST00000553868 MORC3Q14149 939 aa16.01■□□□□ 0.15
SHMT2-208ENST00000553868 ZNF618Q5T7W0 954 aa16.01■□□□□ 0.15
SHMT2-208ENST00000553868 CYFIP1Q7L576 1253 aa16.01■□□□□ 0.15
SHMT2-208ENST00000553868 GPBP1Q86WP2 473 aa16.01■□□□□ 0.15
SHMT2-208ENST00000553868 DHX37Q8IY37 1157 aaKnown RBP16.01■□□□□ 0.15
SHMT2-208ENST00000553868 C4orf19Q8IY42 314 aa16.01■□□□□ 0.15
SHMT2-208ENST00000553868 LRRC15Q8TF66 581 aa16.01■□□□□ 0.15
SHMT2-208ENST00000553868 NKD2Q969F2 451 aaPredicted RBP16.01■□□□□ 0.15
SHMT2-208ENST00000553868 CCDC43Q96MW1 224 aaKnown RBP16.01■□□□□ 0.15
SHMT2-208ENST00000553868 EXOC1Q9NV70 894 aa16.01■□□□□ 0.15
SHMT2-208ENST00000553868 KCND2Q9NZV8 630 aa16.01■□□□□ 0.15
SHMT2-208ENST00000553868 EP300Q09472 2414 aaPredicted RBP16■□□□□ 0.15
SHMT2-208ENST00000553868 RBM47A0AV96 593 aaKnown RBP16■□□□□ 0.15
SHMT2-208ENST00000553868 ARHGEF35A5YM69 484 aa16■□□□□ 0.15
SHMT2-208ENST00000553868 MYMKA6NI61 221 aa16■□□□□ 0.15
SHMT2-208ENST00000553868 NKRFO15226 690 aaKnown RBP eCLIP16■□□□□ 0.15
SHMT2-208ENST00000553868 PPP1R2P41236 205 aa16■□□□□ 0.15
SHMT2-208ENST00000553868 SLC12A3P55017 1021 aa16■□□□□ 0.15
SHMT2-208ENST00000553868 SP2Q02086 613 aa16■□□□□ 0.15
SHMT2-208ENST00000553868 CBX2Q14781 532 aaPredicted RBP16■□□□□ 0.15
SHMT2-208ENST00000553868 CELF3Q5SZQ8 465 aaKnown RBP16■□□□□ 0.15
SHMT2-208ENST00000553868 FAM160B1Q5W0V3 765 aa16■□□□□ 0.15
SHMT2-208ENST00000553868 CCDC62Q6P9F0 684 aa16■□□□□ 0.15
SHMT2-208ENST00000553868 UNC13DQ70J99 1090 aa16■□□□□ 0.15
SHMT2-208ENST00000553868 OTUD6AQ7L8S5 288 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms