RNA–Protein interactions for RNA: ENST00000553569.1

TDP1-206, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 879 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-206ENST00000553569 DRC1Q96MC2 740 aa25.24■■□□□ 1.63
TDP1-206ENST00000553569 KIFC3Q9BVG8 833 aa25.24■■□□□ 1.63
TDP1-206ENST00000553569 NFKBIZQ9BYH8 718 aa25.24■■□□□ 1.63
TDP1-206ENST00000553569 CERS4Q9HA82 394 aa25.24■■□□□ 1.63
TDP1-206ENST00000553569 CHST12Q9NRB3 414 aa25.24■■□□□ 1.63
TDP1-206ENST00000553569 MTMR10Q9NXD2 777 aa25.24■■□□□ 1.63
TDP1-206ENST00000553569 DACT1Q9NYF0 836 aa25.24■■□□□ 1.63
TDP1-206ENST00000553569 ADGRA3Q8IWK6 1321 aa25.23■■□□□ 1.63
TDP1-206ENST00000553569 NPHP3-ACAD11A0A0J9YXS1 232 aa25.23■■□□□ 1.63
TDP1-206ENST00000553569 LINC01553A4QN01 128 aa25.23■■□□□ 1.63
TDP1-206ENST00000553569 GUCY2CP25092 1073 aa25.23■■□□□ 1.63
TDP1-206ENST00000553569 ANP32AP39687 249 aaKnown RBP25.23■■□□□ 1.63
TDP1-206ENST00000553569 NAMPTP43490 491 aa25.23■■□□□ 1.63
TDP1-206ENST00000553569 ME1P48163 572 aa25.23■■□□□ 1.63
TDP1-206ENST00000553569 GATMP50440 423 aa25.23■■□□□ 1.63
TDP1-206ENST00000553569 KRT85P78386 507 aa25.23■■□□□ 1.63
TDP1-206ENST00000553569 CACNB1Q02641 598 aaPredicted RBP25.23■■□□□ 1.63
TDP1-206ENST00000553569 MAPK7Q13164 816 aa25.23■■□□□ 1.63
TDP1-206ENST00000553569 GRIN2CQ14957 1233 aa25.23■■□□□ 1.63
TDP1-206ENST00000553569 RRAGBQ5VZM2 374 aa25.23■■□□□ 1.63
TDP1-206ENST00000553569 CDCA2Q69YH5 1023 aaPredicted RBP25.23■■□□□ 1.63
TDP1-206ENST00000553569 DAW1Q8N136 415 aa25.23■■□□□ 1.63
TDP1-206ENST00000553569 RNF169Q8NCN4 708 aa25.23■■□□□ 1.63
TDP1-206ENST00000553569 LARP4BQ92615 738 aaKnown RBP25.23■■□□□ 1.63
TDP1-206ENST00000553569 ATP6V1DQ9Y5K8 247 aa25.23■■□□□ 1.63
TDP1-206ENST00000553569 COL4A6Q14031 1691 aa25.23■■□□□ 1.63
TDP1-206ENST00000553569 TSPAN1O60635 241 aa25.22■■□□□ 1.63
TDP1-206ENST00000553569 DGKIO75912 1065 aa25.22■■□□□ 1.63
TDP1-206ENST00000553569 LIG1P18858 919 aa25.22■■□□□ 1.63
TDP1-206ENST00000553569 PEX3P56589 373 aa25.22■■□□□ 1.63
TDP1-206ENST00000553569 PAN2Q504Q3 1202 aaKnown RBP25.22■■□□□ 1.63
TDP1-206ENST00000553569 ECHDC2Q86YB7 292 aa25.22■■□□□ 1.63
TDP1-206ENST00000553569 CRIPAKQ8N1N5 446 aa25.22■■□□□ 1.63
TDP1-206ENST00000553569 SP7Q8TDD2 431 aaPredicted RBP25.22■■□□□ 1.63
TDP1-206ENST00000553569 CPB2Q96IY4 423 aa25.22■■□□□ 1.63
TDP1-206ENST00000553569 GUCD1Q96NT3 240 aa25.22■■□□□ 1.63
TDP1-206ENST00000553569 TIPINQ9BVW5 301 aa25.22■■□□□ 1.63
TDP1-206ENST00000553569 PANK2Q9BZ23 570 aa25.22■■□□□ 1.63
TDP1-206ENST00000553569 C2orf40Q9H1Z8 148 aa25.22■■□□□ 1.63
TDP1-206ENST00000553569 TMEM161AQ9NX61 479 aa25.22■■□□□ 1.63
TDP1-206ENST00000553569 STK17AQ9UEE5 414 aa25.22■■□□□ 1.63
TDP1-206ENST00000553569 MTUS1Q9ULD2 1270 aa25.22■■□□□ 1.63
TDP1-206ENST00000553569 TCHHQ07283 1943 aa25.22■■□□□ 1.63
TDP1-206ENST00000553569 A0A087X0B3 334 aa25.21■■□□□ 1.63
TDP1-206ENST00000553569 CCDC169A6NNP5 214 aa25.21■■□□□ 1.63
TDP1-206ENST00000553569 FAM189BP81408 668 aa25.21■■□□□ 1.63
TDP1-206ENST00000553569 DMP1Q13316 513 aaPredicted RBP25.21■■□□□ 1.63
TDP1-206ENST00000553569 PDILTQ8N807 584 aa25.21■■□□□ 1.63
TDP1-206ENST00000553569 PRDM12Q9H4Q4 367 aa25.21■■□□□ 1.63
TDP1-206ENST00000553569 RC3H2Q9HBD1 1191 aaKnown RBP25.21■■□□□ 1.63
TDP1-206ENST00000553569 RNF216Q9NWF9 866 aaPredicted RBP25.21■■□□□ 1.63
TDP1-206ENST00000553569 KCND2Q9NZV8 630 aa25.21■■□□□ 1.63
TDP1-206ENST00000553569 PCDHA7Q9UN72 937 aa25.21■■□□□ 1.63
TDP1-206ENST00000553569 NLRC5Q86WI3 1866 aa25.2■■□□□ 1.62
TDP1-206ENST00000553569 SFI1A8K8P3 1242 aa25.2■■□□□ 1.62
TDP1-206ENST00000553569 B4GALT5O43286 388 aa25.2■■□□□ 1.62
TDP1-206ENST00000553569 KRT18P05783 430 aaKnown RBP25.2■■□□□ 1.62
TDP1-206ENST00000553569 FGFR1P11362 822 aa25.2■■□□□ 1.62
TDP1-206ENST00000553569 DDIT3P35638 169 aa25.2■■□□□ 1.62
TDP1-206ENST00000553569 STAT6P42226 847 aa25.2■■□□□ 1.62
TDP1-206ENST00000553569 NUCB2P80303 420 aa25.2■■□□□ 1.62
TDP1-206ENST00000553569 BTG3Q14201 252 aaPredicted RBP25.2■■□□□ 1.62
TDP1-206ENST00000553569 PCBP1Q15365 356 aaKnown RBP eCLIP25.2■■□□□ 1.62
TDP1-206ENST00000553569 AMHR2Q16671 573 aa25.2■■□□□ 1.62
TDP1-206ENST00000553569 ARSHQ5FYA8 562 aa25.2■■□□□ 1.62
TDP1-206ENST00000553569 AXDND1Q5T1B0 1012 aaPredicted RBP25.2■■□□□ 1.62
TDP1-206ENST00000553569 SHC4Q6S5L8 630 aa25.2■■□□□ 1.62
TDP1-206ENST00000553569 CCDC73Q6ZRK6 1079 aa25.2■■□□□ 1.62
TDP1-206ENST00000553569 ARNTL2Q8WYA1 636 aa25.2■■□□□ 1.62
TDP1-206ENST00000553569 ZNF689Q96CS4 500 aaPredicted RBP25.2■■□□□ 1.62
TDP1-206ENST00000553569 ELAC1Q9H777 363 aaKnown RBP25.2■■□□□ 1.62
TDP1-206ENST00000553569 FAM105AQ9NUU6 356 aa25.2■■□□□ 1.62
TDP1-206ENST00000553569 RCOR1Q9UKL0 485 aa25.2■■□□□ 1.62
TDP1-206ENST00000553569 FNDC1Q4ZHG4 1894 aaPredicted RBP25.19■■□□□ 1.62
TDP1-206ENST00000553569 A0A0U1RQF3 1178 aa25.19■■□□□ 1.62
TDP1-206ENST00000553569 HOXA11P31270 313 aaPredicted RBP25.19■■□□□ 1.62
TDP1-206ENST00000553569 NPTX2P47972 431 aa25.19■■□□□ 1.62
TDP1-206ENST00000553569 NCBP1Q09161 790 aaKnown RBP25.19■■□□□ 1.62
TDP1-206ENST00000553569 NAALADL2Q58DX5 795 aa25.19■■□□□ 1.62
TDP1-206ENST00000553569 FIBCD1Q8N539 461 aa25.19■■□□□ 1.62
TDP1-206ENST00000553569 LEO1Q8WVC0 666 aaPredicted RBP25.19■■□□□ 1.62
TDP1-206ENST00000553569 MYLIPQ8WY64 445 aa25.19■■□□□ 1.62
TDP1-206ENST00000553569 SPATA32Q96LK8 384 aa25.19■■□□□ 1.62
TDP1-206ENST00000553569 TGS1Q96RS0 853 aaKnown RBP25.19■■□□□ 1.62
TDP1-206ENST00000553569 CDX2Q99626 313 aaPredicted RBP25.19■■□□□ 1.62
TDP1-206ENST00000553569 REEP2Q9BRK0 252 aa25.19■■□□□ 1.62
TDP1-206ENST00000553569 PRMT7Q9NVM4 692 aaPredicted RBP25.19■■□□□ 1.62
TDP1-206ENST00000553569 MYO9BQ13459 2157 aa25.19■■□□□ 1.62
TDP1-206ENST00000553569 COL4A4P53420 1690 aaPredicted RBP25.18■■□□□ 1.62
TDP1-206ENST00000553569 TBKBP1A7MCY6 615 aa25.18■■□□□ 1.62
TDP1-206ENST00000553569 PRKCBP05771 671 aa25.18■■□□□ 1.62
TDP1-206ENST00000553569 ATF7P17544 494 aaPredicted RBP25.18■■□□□ 1.62
TDP1-206ENST00000553569 ARF4P18085 180 aaPredicted RBP25.18■■□□□ 1.62
TDP1-206ENST00000553569 AXLP30530 894 aa25.18■■□□□ 1.62
TDP1-206ENST00000553569 MAPK6Q16659 721 aa25.18■■□□□ 1.62
TDP1-206ENST00000553569 TMEM132AQ24JP5 1023 aa25.18■■□□□ 1.62
TDP1-206ENST00000553569 LONRF3Q496Y0 759 aa25.18■■□□□ 1.62
TDP1-206ENST00000553569 NOTUMQ6P988 496 aa25.18■■□□□ 1.62
TDP1-206ENST00000553569 C17orf80Q9BSJ5 609 aa25.18■■□□□ 1.62
TDP1-206ENST00000553569 CCDC113Q9H0I3 377 aa25.18■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms