RNA–Protein interactions for RNA: ENST00000553491.5

ATXN3-220, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 857 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-220ENST00000553491 CSF1RP07333 972 aa5.76□□□□□ -1.49
ATXN3-220ENST00000553491 GNAI3P08754 354 aa5.76□□□□□ -1.49
ATXN3-220ENST00000553491 TRIM27P14373 513 aa5.76□□□□□ -1.49
ATXN3-220ENST00000553491 CORO7P57737 925 aa5.76□□□□□ -1.49
ATXN3-220ENST00000553491 CHRNDQ07001 517 aa5.76□□□□□ -1.49
ATXN3-220ENST00000553491 TNIP1Q15025 636 aa5.76□□□□□ -1.49
ATXN3-220ENST00000553491 EEF1DP3Q658K8 133 aa5.76□□□□□ -1.49
ATXN3-220ENST00000553491 RPTNQ6XPR3 784 aa5.76□□□□□ -1.49
ATXN3-220ENST00000553491 TMEM57Q8N5G2 664 aa5.76□□□□□ -1.49
ATXN3-220ENST00000553491 GOLGA6L2Q8N9W4 650 aaPredicted RBP5.76□□□□□ -1.49
ATXN3-220ENST00000553491 KLHDC4Q8TBB5 520 aa5.76□□□□□ -1.49
ATXN3-220ENST00000553491 TBC1D16Q8TBP0 767 aa5.76□□□□□ -1.49
ATXN3-220ENST00000553491 PANK1Q8TE04 598 aa5.76□□□□□ -1.49
ATXN3-220ENST00000553491 ARHGAP45Q92619 1136 aa5.76□□□□□ -1.49
ATXN3-220ENST00000553491 PLA2G12BQ9BX93 195 aa5.76□□□□□ -1.49
ATXN3-220ENST00000553491 PUS3Q9BZE2 481 aaKnown RBP5.76□□□□□ -1.49
ATXN3-220ENST00000553491 GPRC5CQ9NQ84 441 aa5.76□□□□□ -1.49
ATXN3-220ENST00000553491 BACE2Q9Y5Z0 518 aa5.76□□□□□ -1.49
ATXN3-220ENST00000553491 MYO5AQ9Y4I1 1855 aaKnown RBP5.76□□□□□ -1.49
ATXN3-220ENST00000553491 PSME4Q14997 1843 aa5.76□□□□□ -1.49
ATXN3-220ENST00000553491 XDHP47989 1333 aa5.75□□□□□ -1.49
ATXN3-220ENST00000553491 RIC1Q4ADV7 1423 aa5.75□□□□□ -1.49
ATXN3-220ENST00000553491 LRRC37AA6NMS7 1700 aa5.75□□□□□ -1.49
ATXN3-220ENST00000553491 SNAP23O00161 211 aa5.75□□□□□ -1.49
ATXN3-220ENST00000553491 ARNTLO00327 626 aa5.75□□□□□ -1.49
ATXN3-220ENST00000553491 ECE2O60344 883 aa5.75□□□□□ -1.49
ATXN3-220ENST00000553491 TBC1D8O95759 1140 aa5.75□□□□□ -1.49
ATXN3-220ENST00000553491 GNAI2P04899 355 aa5.75□□□□□ -1.49
ATXN3-220ENST00000553491 NCLP19338 710 aaKnown RBP5.75□□□□□ -1.49
ATXN3-220ENST00000553491 ARL4AP40617 200 aa5.75□□□□□ -1.49
ATXN3-220ENST00000553491 MASP1P48740 699 aa5.75□□□□□ -1.49
ATXN3-220ENST00000553491 CDR1P51861 262 aa5.75□□□□□ -1.49
ATXN3-220ENST00000553491 EPHB3P54753 998 aa5.75□□□□□ -1.49
ATXN3-220ENST00000553491 CXCL9Q07325 125 aa5.75□□□□□ -1.49
ATXN3-220ENST00000553491 OS9Q13438 667 aaPredicted RBP5.75□□□□□ -1.49
ATXN3-220ENST00000553491 LRRC24Q50LG9 513 aa5.75□□□□□ -1.49
ATXN3-220ENST00000553491 FNDC3BQ53EP0 1204 aaKnown RBP5.75□□□□□ -1.49
ATXN3-220ENST00000553491 FBLN7Q53RD9 439 aa5.75□□□□□ -1.49
ATXN3-220ENST00000553491 METTL24Q5JXM2 366 aa5.75□□□□□ -1.49
ATXN3-220ENST00000553491 RNF187Q5TA31 235 aaPredicted RBP5.75□□□□□ -1.49
ATXN3-220ENST00000553491 CIAPIN1Q6FI81 312 aa5.75□□□□□ -1.49
ATXN3-220ENST00000553491 SIAH1Q8IUQ4 282 aa5.75□□□□□ -1.49
ATXN3-220ENST00000553491 DHX37Q8IY37 1157 aaKnown RBP5.75□□□□□ -1.49
ATXN3-220ENST00000553491 NPLOC4Q8TAT6 608 aa5.75□□□□□ -1.49
ATXN3-220ENST00000553491 FRS2Q8WU20 508 aa5.75□□□□□ -1.49
ATXN3-220ENST00000553491 NINJ1Q92982 152 aa5.75□□□□□ -1.49
ATXN3-220ENST00000553491 GPATCH3Q96I76 525 aa5.75□□□□□ -1.49
ATXN3-220ENST00000553491 MEIS3Q99687 375 aa5.75□□□□□ -1.49
ATXN3-220ENST00000553491 MRPL4Q9BYD3 311 aaKnown RBP5.75□□□□□ -1.49
ATXN3-220ENST00000553491 EPB41L4AQ9HCS5 686 aaPredicted RBP5.75□□□□□ -1.49
ATXN3-220ENST00000553491 PDLIM7Q9NR12 457 aa5.75□□□□□ -1.49
ATXN3-220ENST00000553491 FBLN5Q9UBX5 448 aa5.75□□□□□ -1.49
ATXN3-220ENST00000553491 PLAAQ9Y263 795 aa5.75□□□□□ -1.49
ATXN3-220ENST00000553491 MYH2Q9UKX2 1941 aa5.75□□□□□ -1.49
ATXN3-220ENST00000553491 ZNF804BA4D1E1 1349 aa5.74□□□□□ -1.49
ATXN3-220ENST00000553491 ZNF541Q9H0D2 1346 aa5.74□□□□□ -1.49
ATXN3-220ENST00000553491 IRS2Q9Y4H2 1338 aa5.74□□□□□ -1.49
ATXN3-220ENST00000553491 GOLGB1Q14789 3259 aaKnown RBP5.74□□□□□ -1.49
ATXN3-220ENST00000553491 H7C1D1 291 aa5.74□□□□□ -1.49
ATXN3-220ENST00000553491 FZD9O00144 591 aa5.74□□□□□ -1.49
ATXN3-220ENST00000553491 ABLIM1O14639 778 aa5.74□□□□□ -1.49
ATXN3-220ENST00000553491 SRGAP3O43295 1099 aa5.74□□□□□ -1.49
ATXN3-220ENST00000553491 DBHP09172 617 aa5.74□□□□□ -1.49
ATXN3-220ENST00000553491 C1QTNF8P60827 252 aa5.74□□□□□ -1.49
ATXN3-220ENST00000553491 KIAA2012Q0VF49 1180 aa5.74□□□□□ -1.49
ATXN3-220ENST00000553491 G3BP1Q13283 466 aaKnown RBP eCLIP5.74□□□□□ -1.49
ATXN3-220ENST00000553491 RAB3GAP1Q15042 981 aa5.74□□□□□ -1.49
ATXN3-220ENST00000553491 TM4SF20Q53R12 229 aa5.74□□□□□ -1.49
ATXN3-220ENST00000553491 TRIM61Q5EBN2 209 aa5.74□□□□□ -1.49
ATXN3-220ENST00000553491 LCE4AQ5TA78 99 aa5.74□□□□□ -1.49
ATXN3-220ENST00000553491 USP53Q70EK8 1073 aa5.74□□□□□ -1.49
ATXN3-220ENST00000553491 FILIP1Q7Z7B0 1213 aa5.74□□□□□ -1.49
ATXN3-220ENST00000553491 JAMLQ86YT9 394 aa5.74□□□□□ -1.49
ATXN3-220ENST00000553491 GPC2Q8N158 579 aa5.74□□□□□ -1.49
ATXN3-220ENST00000553491 SLC7A14Q8TBB6 771 aa5.74□□□□□ -1.49
ATXN3-220ENST00000553491 KAZALD1Q96I82 304 aa5.74□□□□□ -1.49
ATXN3-220ENST00000553491 NEUROD6Q96NK8 337 aa5.74□□□□□ -1.49
ATXN3-220ENST00000553491 VPS33BQ9H267 617 aa5.74□□□□□ -1.49
ATXN3-220ENST00000553491 TMEFF2Q9UIK5 374 aaPredicted RBP5.74□□□□□ -1.49
ATXN3-220ENST00000553491 CNOT7Q9UIV1 285 aaKnown RBP5.74□□□□□ -1.49
ATXN3-220ENST00000553491 HACL1Q9UJ83 578 aa5.74□□□□□ -1.49
ATXN3-220ENST00000553491 PA2G4Q9UQ80 394 aaKnown RBP5.74□□□□□ -1.49
ATXN3-220ENST00000553491 JAG2Q9Y219 1238 aa5.74□□□□□ -1.49
ATXN3-220ENST00000553491 PRKAB1Q9Y478 270 aa5.74□□□□□ -1.49
ATXN3-220ENST00000553491 WDR90Q96KV7 1748 aa5.74□□□□□ -1.49
ATXN3-220ENST00000553491 NUDT19A8MXV4 375 aa5.73□□□□□ -1.49
ATXN3-220ENST00000553491 F8W031 263 aaPredicted RBP5.73□□□□□ -1.49
ATXN3-220ENST00000553491 PSMD14O00487 310 aa5.73□□□□□ -1.49
ATXN3-220ENST00000553491 N4BP3O15049 544 aa5.73□□□□□ -1.49
ATXN3-220ENST00000553491 DNAJC6O75061 913 aa5.73□□□□□ -1.49
ATXN3-220ENST00000553491 TOMM70O94826 608 aa5.73□□□□□ -1.49
ATXN3-220ENST00000553491 PLS3P13797 630 aa5.73□□□□□ -1.49
ATXN3-220ENST00000553491 SDSP20132 328 aa5.73□□□□□ -1.49
ATXN3-220ENST00000553491 EPHX2P34913 555 aa5.73□□□□□ -1.49
ATXN3-220ENST00000553491 EPS15P42566 896 aa5.73□□□□□ -1.49
ATXN3-220ENST00000553491 GYG1P46976 350 aa5.73□□□□□ -1.49
ATXN3-220ENST00000553491 SEPHS1P49903 392 aa5.73□□□□□ -1.49
ATXN3-220ENST00000553491 GMPSP49915 693 aaPredicted RBP5.73□□□□□ -1.49
ATXN3-220ENST00000553491 RBM5P52756 815 aaKnown RBP eCLIP5.73□□□□□ -1.49
ATXN3-220ENST00000553491 GABREP78334 506 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms