RNA–Protein interactions for RNA: ENST00000553237.5

CDK4-215, Transcript of cyclin dependent kinase 4, humanhuman

TSL 2

Gene CDK4, Length 952 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-215ENST00000553237 ASAP2O43150 1006 aa17.71■□□□□ 0.43
CDK4-215ENST00000553237 GAS2O43903 313 aaKnown RBP17.71■□□□□ 0.43
CDK4-215ENST00000553237 TBX10O75333 385 aa17.71■□□□□ 0.43
CDK4-215ENST00000553237 LYPLA2O95372 231 aa17.71■□□□□ 0.43
CDK4-215ENST00000553237 TECP42680 631 aa17.71■□□□□ 0.43
CDK4-215ENST00000553237 NDUFV1P49821 464 aa17.71■□□□□ 0.43
CDK4-215ENST00000553237 SRGAP1Q7Z6B7 1085 aa17.71■□□□□ 0.43
CDK4-215ENST00000553237 KHSRPQ92945 711 aaKnown RBP eCLIP17.71■□□□□ 0.43
CDK4-215ENST00000553237 CCDC43Q96MW1 224 aaKnown RBP17.71■□□□□ 0.43
CDK4-215ENST00000553237 EPHX3Q9H6B9 360 aa17.71■□□□□ 0.43
CDK4-215ENST00000553237 TLE6Q9H808 572 aa17.71■□□□□ 0.43
CDK4-215ENST00000553237 AGPAT5Q9NUQ2 364 aa17.71■□□□□ 0.43
CDK4-215ENST00000553237 PLXNA4Q9HCM2 1894 aa17.7■□□□□ 0.42
CDK4-215ENST00000553237 NT5C1B-RDH14C9J2C7 533 aa17.7■□□□□ 0.42
CDK4-215ENST00000553237 SKIP12755 728 aa17.7■□□□□ 0.42
CDK4-215ENST00000553237 SSTR3P32745 418 aaPredicted RBP17.7■□□□□ 0.42
CDK4-215ENST00000553237 PLCB3Q01970 1234 aa17.7■□□□□ 0.42
CDK4-215ENST00000553237 RABEP1Q15276 862 aa17.7■□□□□ 0.42
CDK4-215ENST00000553237 TTC38Q5R3I4 469 aa17.7■□□□□ 0.42
CDK4-215ENST00000553237 PLPP4Q5VZY2 271 aa17.7■□□□□ 0.42
CDK4-215ENST00000553237 GJD3Q8N144 294 aa17.7■□□□□ 0.42
CDK4-215ENST00000553237 EFHBQ8N7U6 833 aa17.7■□□□□ 0.42
CDK4-215ENST00000553237 MRPS27Q92552 414 aaKnown RBP17.7■□□□□ 0.42
CDK4-215ENST00000553237 TRAIPQ9BWF2 469 aa17.7■□□□□ 0.42
CDK4-215ENST00000553237 PUF60Q9UHX1 559 aaKnown RBP17.7■□□□□ 0.42
CDK4-215ENST00000553237 INPP5FQ9Y2H2 1132 aa17.7■□□□□ 0.42
CDK4-215ENST00000553237 PCDHB2Q9Y5E7 798 aa17.7■□□□□ 0.42
CDK4-215ENST00000553237 MED24O75448 989 aa17.69■□□□□ 0.42
CDK4-215ENST00000553237 DGAT1O75907 488 aa17.69■□□□□ 0.42
CDK4-215ENST00000553237 OR52Z1P0C646 297 aa17.69■□□□□ 0.42
CDK4-215ENST00000553237 SPATA31C1P0DKV0 1188 aa17.69■□□□□ 0.42
CDK4-215ENST00000553237 RARRES1P49788 294 aa17.69■□□□□ 0.42
CDK4-215ENST00000553237 KRT17Q04695 432 aa17.69■□□□□ 0.42
CDK4-215ENST00000553237 NBR1Q14596 966 aa17.69■□□□□ 0.42
CDK4-215ENST00000553237 MAEAQ7L5Y9 396 aa17.69■□□□□ 0.42
CDK4-215ENST00000553237 CATSPER3Q86XQ3 398 aa17.69■□□□□ 0.42
CDK4-215ENST00000553237 NOSTRINQ8IVI9 506 aa17.69■□□□□ 0.42
CDK4-215ENST00000553237 ASAP3Q8TDY4 903 aa17.69■□□□□ 0.42
CDK4-215ENST00000553237 TCF25Q9BQ70 676 aa17.69■□□□□ 0.42
CDK4-215ENST00000553237 MRPL9Q9BYD2 267 aaKnown RBP17.69■□□□□ 0.42
CDK4-215ENST00000553237 ENTPD7Q9NQZ7 604 aa17.69■□□□□ 0.42
CDK4-215ENST00000553237 SPG21Q9NZD8 308 aa17.69■□□□□ 0.42
CDK4-215ENST00000553237 CD207Q9UJ71 328 aa17.69■□□□□ 0.42
CDK4-215ENST00000553237 FAM50BQ9Y247 325 aa17.69■□□□□ 0.42
CDK4-215ENST00000553237 FSCN2O14926 492 aa17.68■□□□□ 0.42
CDK4-215ENST00000553237 MBTPS2O43462 519 aa17.68■□□□□ 0.42
CDK4-215ENST00000553237 USO1O60763 962 aaKnown RBP17.68■□□□□ 0.42
CDK4-215ENST00000553237 ZNF623O75123 536 aa17.68■□□□□ 0.42
CDK4-215ENST00000553237 OFD1O75665 1012 aa17.68■□□□□ 0.42
CDK4-215ENST00000553237 HOXA11P31270 313 aaPredicted RBP17.68■□□□□ 0.42
CDK4-215ENST00000553237 PPM1AP35813 382 aa17.68■□□□□ 0.42
CDK4-215ENST00000553237 ARL2P36404 184 aa17.68■□□□□ 0.42
CDK4-215ENST00000553237 RAB27AP51159 221 aa17.68■□□□□ 0.42
CDK4-215ENST00000553237 BCAR1P56945 870 aa17.68■□□□□ 0.42
CDK4-215ENST00000553237 PTENP60484 403 aa17.68■□□□□ 0.42
CDK4-215ENST00000553237 RBM10P98175 930 aaKnown RBP17.68■□□□□ 0.42
CDK4-215ENST00000553237 MXD4Q14582 209 aaPredicted RBP17.68■□□□□ 0.42
CDK4-215ENST00000553237 NOMO2Q5JPE7 1267 aa17.68■□□□□ 0.42
CDK4-215ENST00000553237 GLB1LQ6UWU2 654 aa17.68■□□□□ 0.42
CDK4-215ENST00000553237 SLC39A11Q8N1S5 342 aa17.68■□□□□ 0.42
CDK4-215ENST00000553237 PGBD4Q96DM1 585 aa17.68■□□□□ 0.42
CDK4-215ENST00000553237 CLEC1BQ9P126 229 aa17.68■□□□□ 0.42
CDK4-215ENST00000553237 BARX2Q9UMQ3 279 aaPredicted RBP17.68■□□□□ 0.42
CDK4-215ENST00000553237 LZTS1Q9Y250 596 aa17.68■□□□□ 0.42
CDK4-215ENST00000553237 INO80B-WBP1J3KQ70 363 aa17.67■□□□□ 0.42
CDK4-215ENST00000553237 ST18O60284 1047 aa17.67■□□□□ 0.42
CDK4-215ENST00000553237 ZC3H11AO75152 810 aaKnown RBP eCLIP17.67■□□□□ 0.42
CDK4-215ENST00000553237 ERLIN2O94905 339 aa17.67■□□□□ 0.42
CDK4-215ENST00000553237 GLP2RO95838 553 aa17.67■□□□□ 0.42
CDK4-215ENST00000553237 XRCC6P12956 609 aaKnown RBP eCLIP17.67■□□□□ 0.42
CDK4-215ENST00000553237 GLRA2P23416 452 aa17.67■□□□□ 0.42
CDK4-215ENST00000553237 ALDH7A1P49419 539 aaKnown RBP17.67■□□□□ 0.42
CDK4-215ENST00000553237 CAPSQ13938 189 aa17.67■□□□□ 0.42
CDK4-215ENST00000553237 TFDP1Q14186 410 aa17.67■□□□□ 0.42
CDK4-215ENST00000553237 UBXN11Q5T124 520 aa17.67■□□□□ 0.42
CDK4-215ENST00000553237 PDE12Q6L8Q7 609 aaKnown RBP17.67■□□□□ 0.42
CDK4-215ENST00000553237 AGMOQ6ZNB7 445 aa17.67■□□□□ 0.42
CDK4-215ENST00000553237 TMC7Q7Z402 723 aa17.67■□□□□ 0.42
CDK4-215ENST00000553237 CPB2Q96IY4 423 aa17.67■□□□□ 0.42
CDK4-215ENST00000553237 MSLNLQ96KJ4 702 aa17.67■□□□□ 0.42
CDK4-215ENST00000553237 GBP3Q9H0R5 595 aa17.67■□□□□ 0.42
CDK4-215ENST00000553237 POLR3FQ9H1D9 316 aaPredicted RBP17.67■□□□□ 0.42
CDK4-215ENST00000553237 NRDE2Q9H7Z3 1164 aa17.67■□□□□ 0.42
CDK4-215ENST00000553237 TUFT1Q9NNX1 390 aa17.67■□□□□ 0.42
CDK4-215ENST00000553237 GPRC5CQ9NQ84 441 aa17.67■□□□□ 0.42
CDK4-215ENST00000553237 TBC1D13Q9NVG8 400 aa17.67■□□□□ 0.42
CDK4-215ENST00000553237 NOL7Q9UMY1 257 aaKnown RBP17.67■□□□□ 0.42
CDK4-215ENST00000553237 HIDE1A8MVS5 230 aa17.66■□□□□ 0.42
CDK4-215ENST00000553237 RNASELQ05823 741 aaKnown RBP17.66■□□□□ 0.42
CDK4-215ENST00000553237 SMAD4Q13485 552 aaKnown RBP17.66■□□□□ 0.42
CDK4-215ENST00000553237 SMAD2Q15796 467 aaKnown RBP17.66■□□□□ 0.42
CDK4-215ENST00000553237 DUSP6Q16828 381 aa17.66■□□□□ 0.42
CDK4-215ENST00000553237 POTEGQ6S5H5 508 aa17.66■□□□□ 0.42
CDK4-215ENST00000553237 C4orf32Q8N8J7 132 aa17.66■□□□□ 0.42
CDK4-215ENST00000553237 VN1R2Q8NFZ6 395 aa17.66■□□□□ 0.42
CDK4-215ENST00000553237 ERMNQ8TAM6 284 aa17.66■□□□□ 0.42
CDK4-215ENST00000553237 TBC1D32Q96NH3 1257 aa17.66■□□□□ 0.42
CDK4-215ENST00000553237 NACC1Q96RE7 527 aa17.66■□□□□ 0.42
CDK4-215ENST00000553237 POLR3CQ9BUI4 534 aaPredicted RBP17.66■□□□□ 0.42
CDK4-215ENST00000553237 NGRNQ9NPE2 291 aaKnown RBP17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms