RNA–Protein interactions for RNA: ENST00000553011.5

PTCH1-226, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 1,037 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-226ENST00000553011 KIFC3Q9BVG8 833 aa15.62■□□□□ 0.09
PTCH1-226ENST00000553011 TTYH1Q9H313 450 aaPredicted RBP15.62■□□□□ 0.09
PTCH1-226ENST00000553011 C1orf112Q9NSG2 853 aa15.62■□□□□ 0.09
PTCH1-226ENST00000553011 PIN4Q9Y237 131 aaKnown RBP15.62■□□□□ 0.09
PTCH1-226ENST00000553011 SFI1A8K8P3 1242 aa15.61■□□□□ 0.09
PTCH1-226ENST00000553011 STAT6P42226 847 aa15.61■□□□□ 0.09
PTCH1-226ENST00000553011 NAMPTP43490 491 aa15.61■□□□□ 0.09
PTCH1-226ENST00000553011 SARSP49591 514 aaKnown RBP15.61■□□□□ 0.09
PTCH1-226ENST00000553011 HTRA4P83105 476 aaPredicted RBP15.61■□□□□ 0.09
PTCH1-226ENST00000553011 PPP2R5AQ15172 486 aa15.61■□□□□ 0.09
PTCH1-226ENST00000553011 ZNF697Q5TEC3 545 aa15.61■□□□□ 0.09
PTCH1-226ENST00000553011 CDCA2Q69YH5 1023 aaPredicted RBP15.61■□□□□ 0.09
PTCH1-226ENST00000553011 GPR153Q6NV75 609 aa15.61■□□□□ 0.09
PTCH1-226ENST00000553011 CCDC73Q6ZRK6 1079 aa15.61■□□□□ 0.09
PTCH1-226ENST00000553011 FAM43BQ6ZT52 329 aaPredicted RBP15.61■□□□□ 0.09
PTCH1-226ENST00000553011 SLC24A5Q71RS6 500 aa15.61■□□□□ 0.09
PTCH1-226ENST00000553011 NPAS4Q8IUM7 802 aa15.61■□□□□ 0.09
PTCH1-226ENST00000553011 CRIPAKQ8N1N5 446 aa15.61■□□□□ 0.09
PTCH1-226ENST00000553011 IFT74Q96LB3 600 aa15.61■□□□□ 0.09
PTCH1-226ENST00000553011 DRC1Q96MC2 740 aa15.61■□□□□ 0.09
PTCH1-226ENST00000553011 FAM161BQ96MY7 647 aa15.61■□□□□ 0.09
PTCH1-226ENST00000553011 TIPINQ9BVW5 301 aa15.61■□□□□ 0.09
PTCH1-226ENST00000553011 NFKBIZQ9BYH8 718 aa15.61■□□□□ 0.09
PTCH1-226ENST00000553011 AGPAT5Q9NUQ2 364 aa15.61■□□□□ 0.09
PTCH1-226ENST00000553011 STK17AQ9UEE5 414 aa15.61■□□□□ 0.09
PTCH1-226ENST00000553011 ADGRA3Q8IWK6 1321 aa15.61■□□□□ 0.09
PTCH1-226ENST00000553011 CHD7Q9P2D1 2997 aa15.6■□□□□ 0.09
PTCH1-226ENST00000553011 MYO7AQ13402 2215 aa15.6■□□□□ 0.09
PTCH1-226ENST00000553011 B4GALT5O43286 388 aa15.6■□□□□ 0.09
PTCH1-226ENST00000553011 TSPAN1O60635 241 aa15.6■□□□□ 0.09
PTCH1-226ENST00000553011 ERLIN2O94905 339 aa15.6■□□□□ 0.09
PTCH1-226ENST00000553011 HOXA11P31270 313 aaPredicted RBP15.6■□□□□ 0.09
PTCH1-226ENST00000553011 PEX3P56589 373 aa15.6■□□□□ 0.09
PTCH1-226ENST00000553011 FAM189BP81408 668 aa15.6■□□□□ 0.09
PTCH1-226ENST00000553011 AMHR2Q16671 573 aa15.6■□□□□ 0.09
PTCH1-226ENST00000553011 PPP2R2DQ66LE6 453 aa15.6■□□□□ 0.09
PTCH1-226ENST00000553011 TWF2Q6IBS0 349 aaKnown RBP15.6■□□□□ 0.09
PTCH1-226ENST00000553011 SPRED2Q7Z698 418 aa15.6■□□□□ 0.09
PTCH1-226ENST00000553011 ZBTB8OSQ8IWT0 167 aa15.6■□□□□ 0.09
PTCH1-226ENST00000553011 DEFB123Q8N688 67 aa15.6■□□□□ 0.09
PTCH1-226ENST00000553011 DEPTORQ8TB45 409 aa15.6■□□□□ 0.09
PTCH1-226ENST00000553011 CPB2Q96IY4 423 aa15.6■□□□□ 0.09
PTCH1-226ENST00000553011 YME1L1Q96TA2 773 aa15.6■□□□□ 0.09
PTCH1-226ENST00000553011 REEP2Q9BRK0 252 aa15.6■□□□□ 0.09
PTCH1-226ENST00000553011 ZNF576Q9H609 170 aa15.6■□□□□ 0.09
PTCH1-226ENST00000553011 SLC28A3Q9HAS3 691 aa15.6■□□□□ 0.09
PTCH1-226ENST00000553011 GDPD2Q9HCC8 539 aa15.6■□□□□ 0.09
PTCH1-226ENST00000553011 CHST12Q9NRB3 414 aa15.6■□□□□ 0.09
PTCH1-226ENST00000553011 KCND2Q9NZV8 630 aa15.6■□□□□ 0.09
PTCH1-226ENST00000553011 LRFN2Q9ULH4 789 aa15.6■□□□□ 0.09
PTCH1-226ENST00000553011 INSL6Q9Y581 213 aa15.6■□□□□ 0.09
PTCH1-226ENST00000553011 RALGAPA2Q2PPJ7 1873 aa15.59■□□□□ 0.09
PTCH1-226ENST00000553011 TRIP11Q15643 1979 aa15.59■□□□□ 0.09
PTCH1-226ENST00000553011 CCDC169A6NNP5 214 aa15.59■□□□□ 0.09
PTCH1-226ENST00000553011 KRT18P05783 430 aaKnown RBP15.59■□□□□ 0.09
PTCH1-226ENST00000553011 STAG3L1P0CL83 205 aa15.59■□□□□ 0.09
PTCH1-226ENST00000553011 LIG1P18858 919 aa15.59■□□□□ 0.09
PTCH1-226ENST00000553011 NPTX2P47972 431 aa15.59■□□□□ 0.09
PTCH1-226ENST00000553011 GATMP50440 423 aa15.59■□□□□ 0.09
PTCH1-226ENST00000553011 TAP1Q03518 808 aa15.59■□□□□ 0.09
PTCH1-226ENST00000553011 GIT2Q14161 759 aa15.59■□□□□ 0.09
PTCH1-226ENST00000553011 RESP18Q5W5W9 173 aa15.59■□□□□ 0.09
PTCH1-226ENST00000553011 ECHDC2Q86YB7 292 aa15.59■□□□□ 0.09
PTCH1-226ENST00000553011 SP7Q8TDD2 431 aaPredicted RBP15.59■□□□□ 0.09
PTCH1-226ENST00000553011 SCAND2PQ9GZW5 306 aaPredicted RBP15.59■□□□□ 0.09
PTCH1-226ENST00000553011 C2orf40Q9H1Z8 148 aa15.59■□□□□ 0.09
PTCH1-226ENST00000553011 SEMA6BQ9H3T3 888 aa15.59■□□□□ 0.09
PTCH1-226ENST00000553011 RC3H2Q9HBD1 1191 aaKnown RBP15.59■□□□□ 0.09
PTCH1-226ENST00000553011 DACT1Q9NYF0 836 aa15.59■□□□□ 0.09
PTCH1-226ENST00000553011 USP20Q9Y2K6 914 aa15.59■□□□□ 0.09
PTCH1-226ENST00000553011 PCDHB7Q9Y5E2 793 aa15.59■□□□□ 0.09
PTCH1-226ENST00000553011 TMEM265A0A087WTH1 108 aa15.58■□□□□ 0.08
PTCH1-226ENST00000553011 A0A0U1RQF3 1178 aa15.58■□□□□ 0.08
PTCH1-226ENST00000553011 LINC01553A4QN01 128 aa15.58■□□□□ 0.08
PTCH1-226ENST00000553011 MYMKA6NI61 221 aa15.58■□□□□ 0.08
PTCH1-226ENST00000553011 TTLL13PA6NNM8 815 aa15.58■□□□□ 0.08
PTCH1-226ENST00000553011 DGKIO75912 1065 aa15.58■□□□□ 0.08
PTCH1-226ENST00000553011 EDN1P05305 212 aa15.58■□□□□ 0.08
PTCH1-226ENST00000553011 PRKCBP05771 671 aa15.58■□□□□ 0.08
PTCH1-226ENST00000553011 PLS3P13797 630 aa15.58■□□□□ 0.08
PTCH1-226ENST00000553011 ATF7P17544 494 aaPredicted RBP15.58■□□□□ 0.08
PTCH1-226ENST00000553011 ARF4P18085 180 aaPredicted RBP15.58■□□□□ 0.08
PTCH1-226ENST00000553011 DMP1Q13316 513 aaPredicted RBP15.58■□□□□ 0.08
PTCH1-226ENST00000553011 PCBP1Q15365 356 aaKnown RBP eCLIP15.58■□□□□ 0.08
PTCH1-226ENST00000553011 E2F4Q16254 413 aa15.58■□□□□ 0.08
PTCH1-226ENST00000553011 TPRNQ4KMQ1 711 aa15.58■□□□□ 0.08
PTCH1-226ENST00000553011 UBXN11Q5T124 520 aa15.58■□□□□ 0.08
PTCH1-226ENST00000553011 SV2BQ7L1I2 683 aa15.58■□□□□ 0.08
PTCH1-226ENST00000553011 CDR2LQ86X02 465 aaPredicted RBP15.58■□□□□ 0.08
PTCH1-226ENST00000553011 RNF169Q8NCN4 708 aa15.58■□□□□ 0.08
PTCH1-226ENST00000553011 DHX58Q96C10 678 aa15.58■□□□□ 0.08
PTCH1-226ENST00000553011 ZNF689Q96CS4 500 aaPredicted RBP15.58■□□□□ 0.08
PTCH1-226ENST00000553011 CCDC113Q9H0I3 377 aa15.58■□□□□ 0.08
PTCH1-226ENST00000553011 FZD8Q9H461 694 aa15.58■□□□□ 0.08
PTCH1-226ENST00000553011 CERS4Q9HA82 394 aa15.58■□□□□ 0.08
PTCH1-226ENST00000553011 PRMT7Q9NVM4 692 aaPredicted RBP15.58■□□□□ 0.08
PTCH1-226ENST00000553011 TMEM161AQ9NX61 479 aa15.58■□□□□ 0.08
PTCH1-226ENST00000553011 FAM13BQ9NYF5 915 aa15.58■□□□□ 0.08
PTCH1-226ENST00000553011 CIZ1Q9ULV3 898 aaPredicted RBP15.58■□□□□ 0.08
PTCH1-226ENST00000553011 PRRC2BQ5JSZ5 2229 aaKnown RBP15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms