RNA–Protein interactions for RNA: ENST00000552516.5

TGFBR1-209, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 1 (best) BASIC

Gene TGFBR1, Length 5,933 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-209ENST00000552516 KCNB1Q14721 858 aa11.61□□□□□ -0.55
TGFBR1-209ENST00000552516 WDR72Q3MJ13 1102 aa11.61□□□□□ -0.55
TGFBR1-209ENST00000552516 NYAP1Q6ZVC0 841 aa11.61□□□□□ -0.55
TGFBR1-209ENST00000552516 SLC20A1Q8WUM9 679 aa11.61□□□□□ -0.55
TGFBR1-209ENST00000552516 NUP85Q9BW27 656 aa11.61□□□□□ -0.55
TGFBR1-209ENST00000552516 KLK14Q9P0G3 267 aa11.61□□□□□ -0.55
TGFBR1-209ENST00000552516 DAAM1Q9Y4D1 1078 aa11.61□□□□□ -0.55
TGFBR1-209ENST00000552516 FOXN3O00409 490 aaPredicted RBP11.61□□□□□ -0.55
TGFBR1-209ENST00000552516 ATP9AO75110 1047 aa11.61□□□□□ -0.55
TGFBR1-209ENST00000552516 RPA1P27694 616 aa11.61□□□□□ -0.55
TGFBR1-209ENST00000552516 BASP1P80723 227 aaKnown RBP11.61□□□□□ -0.55
TGFBR1-209ENST00000552516 PAN2Q504Q3 1202 aaKnown RBP11.61□□□□□ -0.55
TGFBR1-209ENST00000552516 CATSPER4Q7RTX7 472 aa11.61□□□□□ -0.55
TGFBR1-209ENST00000552516 CCDC170Q8IYT3 715 aa11.61□□□□□ -0.55
TGFBR1-209ENST00000552516 SPATA4Q8NEY3 305 aa11.61□□□□□ -0.55
TGFBR1-209ENST00000552516 NLGN2Q8NFZ4 835 aa11.61□□□□□ -0.55
TGFBR1-209ENST00000552516 MXRA8Q9BRK3 442 aa11.61□□□□□ -0.55
TGFBR1-209ENST00000552516 NUCKS1Q9H1E3 243 aaKnown RBP11.61□□□□□ -0.55
TGFBR1-209ENST00000552516 ATP6V0A4Q9HBG4 840 aa11.61□□□□□ -0.55
TGFBR1-209ENST00000552516 ADAM22Q9P0K1 906 aa11.61□□□□□ -0.55
TGFBR1-209ENST00000552516 ENTPD3O75355 529 aa11.6□□□□□ -0.55
TGFBR1-209ENST00000552516 STAT5BP51692 787 aa11.6□□□□□ -0.55
TGFBR1-209ENST00000552516 RSAD2Q8WXG1 361 aa11.6□□□□□ -0.55
TGFBR1-209ENST00000552516 TMEM206Q9H813 350 aa11.6□□□□□ -0.55
TGFBR1-209ENST00000552516 STK38LQ9Y2H1 464 aa11.6□□□□□ -0.55
TGFBR1-209ENST00000552516 KRT1P04264 644 aa11.6□□□□□ -0.55
TGFBR1-209ENST00000552516 PDGFRBP09619 1106 aa11.6□□□□□ -0.55
TGFBR1-209ENST00000552516 HDLBPQ00341 1268 aaKnown RBP11.6□□□□□ -0.55
TGFBR1-209ENST00000552516 SNRNP35Q16560 246 aaKnown RBP11.6□□□□□ -0.55
TGFBR1-209ENST00000552516 FAM160B1Q5W0V3 765 aa11.6□□□□□ -0.55
TGFBR1-209ENST00000552516 TEX13BQ9BXU2 312 aa11.6□□□□□ -0.55
TGFBR1-209ENST00000552516 RCCD1A6NED2 376 aa11.6□□□□□ -0.55
TGFBR1-209ENST00000552516 LMNB1P20700 586 aa11.6□□□□□ -0.55
TGFBR1-209ENST00000552516 TKFCQ3LXA3 575 aa11.6□□□□□ -0.55
TGFBR1-209ENST00000552516 KDELC2Q7Z4H8 507 aa11.6□□□□□ -0.55
TGFBR1-209ENST00000552516 COPS5Q92905 334 aa11.6□□□□□ -0.55
TGFBR1-209ENST00000552516 TTI1O43156 1089 aa11.6□□□□□ -0.55
TGFBR1-209ENST00000552516 MYL1P05976 194 aa11.6□□□□□ -0.55
TGFBR1-209ENST00000552516 FMO5P49326 533 aa11.6□□□□□ -0.55
TGFBR1-209ENST00000552516 DLG4P78352 724 aa11.6□□□□□ -0.55
TGFBR1-209ENST00000552516 BFSP1Q12934 665 aa11.6□□□□□ -0.55
TGFBR1-209ENST00000552516 TAF12Q16514 161 aa11.6□□□□□ -0.55
TGFBR1-209ENST00000552516 RFX6Q8HWS3 928 aa11.6□□□□□ -0.55
TGFBR1-209ENST00000552516 CCNYQ8ND76 341 aa11.6□□□□□ -0.55
TGFBR1-209ENST00000552516 TRPM4Q8TD43 1214 aa11.6□□□□□ -0.55
TGFBR1-209ENST00000552516 RAB20Q9NX57 234 aa11.6□□□□□ -0.55
TGFBR1-209ENST00000552516 AGO2Q9UKV8 859 aaKnown RBP11.6□□□□□ -0.55
TGFBR1-209ENST00000552516 CARSP49589 748 aaKnown RBP11.59□□□□□ -0.55
TGFBR1-209ENST00000552516 HERVK_113P62684 666 aa11.59□□□□□ -0.55
TGFBR1-209ENST00000552516 EPHA7Q15375 998 aa11.59□□□□□ -0.55
TGFBR1-209ENST00000552516 E2F4Q16254 413 aa11.59□□□□□ -0.55
TGFBR1-209ENST00000552516 SPOUT1Q5T280 376 aaKnown RBP11.59□□□□□ -0.55
TGFBR1-209ENST00000552516 AADACL2Q6P093 401 aa11.59□□□□□ -0.55
TGFBR1-209ENST00000552516 IWS1Q96ST2 819 aa11.59□□□□□ -0.55
TGFBR1-209ENST00000552516 DNAJC18Q9H819 358 aa11.59□□□□□ -0.55
TGFBR1-209ENST00000552516 PRRC2BQ5JSZ5 2229 aaKnown RBP11.59□□□□□ -0.55
TGFBR1-209ENST00000552516 NNTQ13423 1086 aa11.59□□□□□ -0.55
TGFBR1-209ENST00000552516 CYP4A22Q5TCH4 519 aa11.59□□□□□ -0.55
TGFBR1-209ENST00000552516 SLC35G2Q8TBE7 412 aa11.59□□□□□ -0.55
TGFBR1-209ENST00000552516 FAM49BQ9NUQ9 324 aa11.59□□□□□ -0.55
TGFBR1-209ENST00000552516 ADAM21Q9UKJ8 722 aa11.59□□□□□ -0.55
TGFBR1-209ENST00000552516 MYO3BQ8WXR4 1341 aa11.59□□□□□ -0.55
TGFBR1-209ENST00000552516 MEIS2O14770 477 aa11.59□□□□□ -0.55
TGFBR1-209ENST00000552516 NLRP11P59045 1033 aaKnown RBP11.59□□□□□ -0.55
TGFBR1-209ENST00000552516 STYK1Q6J9G0 422 aa11.59□□□□□ -0.55
TGFBR1-209ENST00000552516 CCDC121Q6ZUS5 278 aa11.59□□□□□ -0.55
TGFBR1-209ENST00000552516 ARMC9Q7Z3E5 817 aa11.59□□□□□ -0.55
TGFBR1-209ENST00000552516 MMP19Q99542 508 aa11.59□□□□□ -0.55
TGFBR1-209ENST00000552516 RIPK3Q9Y572 518 aa11.59□□□□□ -0.55
TGFBR1-209ENST00000552516 E2F8A0AVK6 867 aa11.59□□□□□ -0.55
TGFBR1-209ENST00000552516 MAPK6Q16659 721 aa11.59□□□□□ -0.55
TGFBR1-209ENST00000552516 GOLGA5Q8TBA6 731 aa11.59□□□□□ -0.55
TGFBR1-209ENST00000552516 CLMNQ96JQ2 1002 aa11.59□□□□□ -0.55
TGFBR1-209ENST00000552516 TACO1Q9BSH4 297 aaKnown RBP11.59□□□□□ -0.55
TGFBR1-209ENST00000552516 MMTAG2Q9BU76 263 aaKnown RBP11.59□□□□□ -0.55
TGFBR1-209ENST00000552516 THAP2Q9H0W7 228 aa11.59□□□□□ -0.55
TGFBR1-209ENST00000552516 PDS5AQ29RF7 1337 aaKnown RBP11.59□□□□□ -0.55
TGFBR1-209ENST00000552516 AFDNP55196 1824 aaKnown RBP11.59□□□□□ -0.55
TGFBR1-209ENST00000552516 RGL2O15211 777 aa11.59□□□□□ -0.55
TGFBR1-209ENST00000552516 SARSP49591 514 aaKnown RBP11.59□□□□□ -0.55
TGFBR1-209ENST00000552516 C9orf131Q5VYM1 1079 aa11.59□□□□□ -0.55
TGFBR1-209ENST00000552516 DNAJC24Q6P3W2 148 aa11.59□□□□□ -0.55
TGFBR1-209ENST00000552516 APBB1IPQ7Z5R6 666 aaPredicted RBP11.59□□□□□ -0.55
TGFBR1-209ENST00000552516 ALG13Q9NP73 1137 aaKnown RBP11.59□□□□□ -0.55
TGFBR1-209ENST00000552516 DMGDHQ9UI17 866 aaKnown RBP11.59□□□□□ -0.55
TGFBR1-209ENST00000552516 VTNP04004 478 aa11.58□□□□□ -0.56
TGFBR1-209ENST00000552516 RARBP10826 455 aa11.58□□□□□ -0.56
TGFBR1-209ENST00000552516 YY1P25490 414 aa11.58□□□□□ -0.56
TGFBR1-209ENST00000552516 ADORA2BP29275 332 aa11.58□□□□□ -0.56
TGFBR1-209ENST00000552516 RRP1BQ14684 758 aaKnown RBP11.58□□□□□ -0.56
TGFBR1-209ENST00000552516 ZC3H18Q86VM9 953 aaKnown RBP11.58□□□□□ -0.56
TGFBR1-209ENST00000552516 LRRN4Q8WUT4 740 aa11.58□□□□□ -0.56
TGFBR1-209ENST00000552516 CABS1Q96KC9 395 aa11.58□□□□□ -0.56
TGFBR1-209ENST00000552516 CCDC77Q9BR77 488 aa11.58□□□□□ -0.56
TGFBR1-209ENST00000552516 WDR18Q9BV38 432 aa11.58□□□□□ -0.56
TGFBR1-209ENST00000552516 NACA2Q9H009 215 aa11.58□□□□□ -0.56
TGFBR1-209ENST00000552516 ATP2A1O14983 1001 aa11.58□□□□□ -0.56
TGFBR1-209ENST00000552516 SLITRK3O94933 977 aa11.58□□□□□ -0.56
TGFBR1-209ENST00000552516 FXR2P51116 673 aaKnown RBP eCLIP11.58□□□□□ -0.56
TGFBR1-209ENST00000552516 ATG4AQ8WYN0 398 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms