RNA–Protein interactions for RNA: ENST00000551344.1

DDX54-208, Transcript of DEAD-box helicase 54, humanhuman

TSL 5

Gene DDX54, Length 872 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-208ENST00000551344 RNF169Q8NCN4 708 aa21.09■□□□□ 0.97
DDX54-208ENST00000551344 SPPL3Q8TCT6 385 aa21.09■□□□□ 0.97
DDX54-208ENST00000551344 ASAP3Q8TDY4 903 aa21.09■□□□□ 0.97
DDX54-208ENST00000551344 NSUN3Q9H649 340 aaKnown RBP21.09■□□□□ 0.97
DDX54-208ENST00000551344 ALG13Q9NP73 1137 aaKnown RBP21.09■□□□□ 0.97
DDX54-208ENST00000551344 KIAA1024Q9UPX6 916 aa21.09■□□□□ 0.97
DDX54-208ENST00000551344 ARHGEF35A5YM69 484 aa21.08■□□□□ 0.97
DDX54-208ENST00000551344 ITGB1P05556 798 aa21.08■□□□□ 0.97
DDX54-208ENST00000551344 ATF7P17544 494 aaPredicted RBP21.08■□□□□ 0.97
DDX54-208ENST00000551344 CYP11B2P19099 503 aa21.08■□□□□ 0.97
DDX54-208ENST00000551344 AXLP30530 894 aa21.08■□□□□ 0.97
DDX54-208ENST00000551344 CAPSQ13938 189 aa21.08■□□□□ 0.97
DDX54-208ENST00000551344 ARL6IP4Q66PJ3 421 aaKnown RBP21.08■□□□□ 0.97
DDX54-208ENST00000551344 SNX29Q8TEQ0 813 aa21.08■□□□□ 0.97
DDX54-208ENST00000551344 COL25A1Q9BXS0 654 aaPredicted RBP21.08■□□□□ 0.97
DDX54-208ENST00000551344 POLR3FQ9H1D9 316 aaPredicted RBP21.08■□□□□ 0.97
DDX54-208ENST00000551344 CWH43Q9H720 699 aa21.08■□□□□ 0.97
DDX54-208ENST00000551344 FNDC1Q4ZHG4 1894 aaPredicted RBP21.07■□□□□ 0.96
DDX54-208ENST00000551344 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP21.07■□□□□ 0.96
DDX54-208ENST00000551344 ERLIN2O94905 339 aa21.07■□□□□ 0.96
DDX54-208ENST00000551344 LAG3P18627 525 aa21.07■□□□□ 0.96
DDX54-208ENST00000551344 UBE3AQ05086 875 aa21.07■□□□□ 0.96
DDX54-208ENST00000551344 CLLU1OSQ5K130 101 aa21.07■□□□□ 0.96
DDX54-208ENST00000551344 LRRC55Q6ZSA7 311 aa21.07■□□□□ 0.96
DDX54-208ENST00000551344 MAEAQ7L5Y9 396 aa21.07■□□□□ 0.96
DDX54-208ENST00000551344 LRRC43Q8N309 656 aa21.07■□□□□ 0.96
DDX54-208ENST00000551344 PGBD4Q96DM1 585 aa21.07■□□□□ 0.96
DDX54-208ENST00000551344 DNM3Q9UQ16 869 aa21.07■□□□□ 0.96
DDX54-208ENST00000551344 PCDHB2Q9Y5E7 798 aa21.07■□□□□ 0.96
DDX54-208ENST00000551344 ARID2Q68CP9 1835 aa21.06■□□□□ 0.96
DDX54-208ENST00000551344 INO80B-WBP1J3KQ70 363 aa21.06■□□□□ 0.96
DDX54-208ENST00000551344 K7ELQ4 463 aaPredicted RBP21.06■□□□□ 0.96
DDX54-208ENST00000551344 NCK2O43639 380 aa21.06■□□□□ 0.96
DDX54-208ENST00000551344 CAMK1Q14012 370 aa21.06■□□□□ 0.96
DDX54-208ENST00000551344 MRPL10Q7Z7H8 261 aaKnown RBP21.06■□□□□ 0.96
DDX54-208ENST00000551344 KCTD17Q8N5Z5 321 aa21.06■□□□□ 0.96
DDX54-208ENST00000551344 COLGALT1Q8NBJ5 622 aa21.06■□□□□ 0.96
DDX54-208ENST00000551344 HELQQ8TDG4 1101 aa21.06■□□□□ 0.96
DDX54-208ENST00000551344 MRPL9Q9BYD2 267 aaKnown RBP21.06■□□□□ 0.96
DDX54-208ENST00000551344 BHMT2Q9H2M3 363 aa21.06■□□□□ 0.96
DDX54-208ENST00000551344 GPRC5CQ9NQ84 441 aa21.06■□□□□ 0.96
DDX54-208ENST00000551344 DDX19AQ9NUU7 478 aaKnown RBP21.06■□□□□ 0.96
DDX54-208ENST00000551344 MYO7AQ13402 2215 aa21.06■□□□□ 0.96
DDX54-208ENST00000551344 BMP15O95972 392 aa21.05■□□□□ 0.96
DDX54-208ENST00000551344 TFF2Q03403 129 aa21.05■□□□□ 0.96
DDX54-208ENST00000551344 MBTD1Q05BQ5 628 aa21.05■□□□□ 0.96
DDX54-208ENST00000551344 TCEAL5Q5H9L2 206 aa21.05■□□□□ 0.96
DDX54-208ENST00000551344 NOTUMQ6P988 496 aa21.05■□□□□ 0.96
DDX54-208ENST00000551344 GLB1LQ6UWU2 654 aa21.05■□□□□ 0.96
DDX54-208ENST00000551344 CNNM3Q8NE01 707 aa21.05■□□□□ 0.96
DDX54-208ENST00000551344 POF1BQ8WVV4 589 aa21.05■□□□□ 0.96
DDX54-208ENST00000551344 SNX21Q969T3 373 aa21.05■□□□□ 0.96
DDX54-208ENST00000551344 CCDC51Q96ER9 411 aa21.05■□□□□ 0.96
DDX54-208ENST00000551344 PP2D1A8MPX8 630 aa21.04■□□□□ 0.96
DDX54-208ENST00000551344 TSPAN1O60635 241 aa21.04■□□□□ 0.96
DDX54-208ENST00000551344 FGF18O76093 207 aa21.04■□□□□ 0.96
DDX54-208ENST00000551344 EYA4O95677 639 aa21.04■□□□□ 0.96
DDX54-208ENST00000551344 CDC25AP30304 524 aa21.04■□□□□ 0.96
DDX54-208ENST00000551344 PLCB3Q01970 1234 aa21.04■□□□□ 0.96
DDX54-208ENST00000551344 UBXN11Q5T124 520 aa21.04■□□□□ 0.96
DDX54-208ENST00000551344 KCNT2Q6UVM3 1135 aa21.04■□□□□ 0.96
DDX54-208ENST00000551344 THNSL1Q8IYQ7 743 aa21.04■□□□□ 0.96
DDX54-208ENST00000551344 LPPQ93052 612 aa21.04■□□□□ 0.96
DDX54-208ENST00000551344 MMTAG2Q9BU76 263 aaKnown RBP21.04■□□□□ 0.96
DDX54-208ENST00000551344 UBE2ZQ9H832 354 aaPredicted RBP21.04■□□□□ 0.96
DDX54-208ENST00000551344 HCSTQ9UBK5 93 aa21.04■□□□□ 0.96
DDX54-208ENST00000551344 VPS37CA5D8V6 355 aaPredicted RBP21.03■□□□□ 0.96
DDX54-208ENST00000551344 CARNS1A5YM72 827 aa21.03■□□□□ 0.96
DDX54-208ENST00000551344 VWA3AA6NCI4 1184 aa21.03■□□□□ 0.96
DDX54-208ENST00000551344 LRRIQ4A6NIV6 560 aa21.03■□□□□ 0.96
DDX54-208ENST00000551344 OFD1O75665 1012 aa21.03■□□□□ 0.96
DDX54-208ENST00000551344 BMP1P13497 986 aa21.03■□□□□ 0.96
DDX54-208ENST00000551344 SYT1P21579 422 aa21.03■□□□□ 0.96
DDX54-208ENST00000551344 DNAJB1P25685 340 aa21.03■□□□□ 0.96
DDX54-208ENST00000551344 PPM1AP35813 382 aa21.03■□□□□ 0.96
DDX54-208ENST00000551344 COL19A1Q14993 1142 aa21.03■□□□□ 0.96
DDX54-208ENST00000551344 PPP2R5AQ15172 486 aa21.03■□□□□ 0.96
DDX54-208ENST00000551344 AMHR2Q16671 573 aa21.03■□□□□ 0.96
DDX54-208ENST00000551344 HYIQ5T013 277 aa21.03■□□□□ 0.96
DDX54-208ENST00000551344 KIFAP3Q92845 792 aa21.03■□□□□ 0.96
DDX54-208ENST00000551344 PPP2R3CQ969Q6 453 aa21.03■□□□□ 0.96
DDX54-208ENST00000551344 AK8Q96MA6 479 aa21.03■□□□□ 0.96
DDX54-208ENST00000551344 ZNF558Q96NG5 402 aa21.03■□□□□ 0.96
DDX54-208ENST00000551344 CSRNP2Q9H175 543 aa21.03■□□□□ 0.96
DDX54-208ENST00000551344 C2orf40Q9H1Z8 148 aa21.03■□□□□ 0.96
DDX54-208ENST00000551344 UBN1Q9NPG3 1134 aa21.03■□□□□ 0.96
DDX54-208ENST00000551344 PUF60Q9UHX1 559 aaKnown RBP21.03■□□□□ 0.96
DDX54-208ENST00000551344 LZTS1Q9Y250 596 aa21.03■□□□□ 0.96
DDX54-208ENST00000551344 ARF4P18085 180 aaPredicted RBP21.02■□□□□ 0.96
DDX54-208ENST00000551344 NCLP19338 710 aaKnown RBP21.02■□□□□ 0.96
DDX54-208ENST00000551344 NOMO2Q5JPE7 1267 aa21.02■□□□□ 0.96
DDX54-208ENST00000551344 CDCA2Q69YH5 1023 aaPredicted RBP21.02■□□□□ 0.96
DDX54-208ENST00000551344 PDE12Q6L8Q7 609 aaKnown RBP21.02■□□□□ 0.96
DDX54-208ENST00000551344 AGMOQ6ZNB7 445 aa21.02■□□□□ 0.96
DDX54-208ENST00000551344 ZBTB8OSQ8IWT0 167 aa21.02■□□□□ 0.96
DDX54-208ENST00000551344 PABPC5Q96DU9 382 aaKnown RBP21.02■□□□□ 0.96
DDX54-208ENST00000551344 PRIMPOLQ96LW4 560 aa21.02■□□□□ 0.96
DDX54-208ENST00000551344 NT5C3AQ9H0P0 336 aa21.02■□□□□ 0.96
DDX54-208ENST00000551344 FZD8Q9H461 694 aa21.02■□□□□ 0.96
DDX54-208ENST00000551344 PRMT7Q9NVM4 692 aaPredicted RBP21.02■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms