RNA–Protein interactions for RNA: ENST00000550771.5

CACNB3-218, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 4

Gene CACNB3, Length 586 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-218ENST00000550771 CCDC194A0A1B0GVG4 234 aa23.15■■□□□ 1.3
CACNB3-218ENST00000550771 ZC3H11AO75152 810 aaKnown RBP eCLIP23.15■■□□□ 1.3
CACNB3-218ENST00000550771 CXCL14O95715 111 aa23.15■■□□□ 1.3
CACNB3-218ENST00000550771 GCFC2P16383 781 aaKnown RBP23.15■■□□□ 1.3
CACNB3-218ENST00000550771 NOMO2Q5JPE7 1267 aa23.15■■□□□ 1.3
CACNB3-218ENST00000550771 PLA2G4FQ68DD2 849 aa23.15■■□□□ 1.3
CACNB3-218ENST00000550771 NEK8Q86SG6 692 aa23.15■■□□□ 1.3
CACNB3-218ENST00000550771 DDX53Q86TM3 631 aaKnown RBP23.15■■□□□ 1.3
CACNB3-218ENST00000550771 KSR1Q8IVT5 923 aa23.15■■□□□ 1.3
CACNB3-218ENST00000550771 VPS52Q8N1B4 723 aa23.15■■□□□ 1.3
CACNB3-218ENST00000550771 SLC7A3Q8WY07 619 aa23.15■■□□□ 1.3
CACNB3-218ENST00000550771 LPPQ93052 612 aa23.15■■□□□ 1.3
CACNB3-218ENST00000550771 ASIC4Q96FT7 647 aa23.15■■□□□ 1.3
CACNB3-218ENST00000550771 IGSF21Q96ID5 467 aa23.15■■□□□ 1.3
CACNB3-218ENST00000550771 PHF20Q9BVI0 1012 aa23.15■■□□□ 1.3
CACNB3-218ENST00000550771 ZBP1Q9H171 429 aa23.15■■□□□ 1.3
CACNB3-218ENST00000550771 IFT122Q9HBG6 1241 aa23.15■■□□□ 1.3
CACNB3-218ENST00000550771 PDRG1Q9NUG6 133 aa23.15■■□□□ 1.3
CACNB3-218ENST00000550771 TBC1D13Q9NVG8 400 aa23.15■■□□□ 1.3
CACNB3-218ENST00000550771 KCNJ14Q9UNX9 436 aa23.15■■□□□ 1.3
CACNB3-218ENST00000550771 OFD1O75665 1012 aa23.14■■□□□ 1.29
CACNB3-218ENST00000550771 P4HBP07237 508 aaKnown RBP23.14■■□□□ 1.29
CACNB3-218ENST00000550771 GALTP07902 379 aa23.14■■□□□ 1.29
CACNB3-218ENST00000550771 CTSAP10619 480 aa23.14■■□□□ 1.29
CACNB3-218ENST00000550771 TMEM173Q86WV6 379 aaPredicted RBP23.14■■□□□ 1.29
CACNB3-218ENST00000550771 PGBD4Q96DM1 585 aa23.14■■□□□ 1.29
CACNB3-218ENST00000550771 NRDE2Q9H7Z3 1164 aa23.14■■□□□ 1.29
CACNB3-218ENST00000550771 AGPAT5Q9NUQ2 364 aa23.14■■□□□ 1.29
CACNB3-218ENST00000550771 COL4A3BPQ9Y5P4 624 aa23.14■■□□□ 1.29
CACNB3-218ENST00000550771 STK36Q9NRP7 1315 aa23.13■■□□□ 1.29
CACNB3-218ENST00000550771 TBX3O15119 743 aa23.13■■□□□ 1.29
CACNB3-218ENST00000550771 XBP1P17861 261 aa23.13■■□□□ 1.29
CACNB3-218ENST00000550771 PTPN5P54829 565 aa23.13■■□□□ 1.29
CACNB3-218ENST00000550771 SCRN1Q12765 414 aa23.13■■□□□ 1.29
CACNB3-218ENST00000550771 IER5LQ5T953 404 aa23.13■■□□□ 1.29
CACNB3-218ENST00000550771 PRSS33Q8NF86 280 aa23.13■■□□□ 1.29
CACNB3-218ENST00000550771 CEP170P1Q96L14 293 aa23.13■■□□□ 1.29
CACNB3-218ENST00000550771 NAP1L4Q99733 375 aaKnown RBP23.13■■□□□ 1.29
CACNB3-218ENST00000550771 SLKQ9H2G2 1235 aaPredicted RBP23.13■■□□□ 1.29
CACNB3-218ENST00000550771 DHX33Q9H6R0 707 aaKnown RBP23.13■■□□□ 1.29
CACNB3-218ENST00000550771 DZANK1Q9NVP4 752 aa23.13■■□□□ 1.29
CACNB3-218ENST00000550771 PCDHB2Q9Y5E7 798 aa23.13■■□□□ 1.29
CACNB3-218ENST00000550771 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP23.12■■□□□ 1.29
CACNB3-218ENST00000550771 MEIS3P2A8K0S8 358 aa23.12■■□□□ 1.29
CACNB3-218ENST00000550771 CA8P35219 290 aa23.12■■□□□ 1.29
CACNB3-218ENST00000550771 RFC5P40937 340 aa23.12■■□□□ 1.29
CACNB3-218ENST00000550771 MTHFRP42898 656 aa23.12■■□□□ 1.29
CACNB3-218ENST00000550771 NPEPPSP55786 919 aa23.12■■□□□ 1.29
CACNB3-218ENST00000550771 RNASELQ05823 741 aaKnown RBP23.12■■□□□ 1.29
CACNB3-218ENST00000550771 SRGAP1Q7Z6B7 1085 aa23.12■■□□□ 1.29
CACNB3-218ENST00000550771 C4orf19Q8IY42 314 aa23.12■■□□□ 1.29
CACNB3-218ENST00000550771 TMEM87AQ8NBN3 555 aa23.12■■□□□ 1.29
CACNB3-218ENST00000550771 PSPC1Q8WXF1 523 aaKnown RBP23.12■■□□□ 1.29
CACNB3-218ENST00000550771 RIPOR3Q96MK2 946 aa23.12■■□□□ 1.29
CACNB3-218ENST00000550771 POMKQ9H5K3 350 aa23.12■■□□□ 1.29
CACNB3-218ENST00000550771 STK39Q9UEW8 545 aa23.12■■□□□ 1.29
CACNB3-218ENST00000550771 CDH22Q9UJ99 828 aa23.12■■□□□ 1.29
CACNB3-218ENST00000550771 INPP5FQ9Y2H2 1132 aa23.12■■□□□ 1.29
CACNB3-218ENST00000550771 GAS2O43903 313 aaKnown RBP23.11■■□□□ 1.29
CACNB3-218ENST00000550771 EPHA7Q15375 998 aa23.11■■□□□ 1.29
CACNB3-218ENST00000550771 LONRF3Q496Y0 759 aa23.11■■□□□ 1.29
CACNB3-218ENST00000550771 ZBTB33Q86T24 672 aa23.11■■□□□ 1.29
CACNB3-218ENST00000550771 PRPF31Q8WWY3 499 aaKnown RBP23.11■■□□□ 1.29
CACNB3-218ENST00000550771 HAS1Q92839 578 aa23.11■■□□□ 1.29
CACNB3-218ENST00000550771 WRAP73Q9P2S5 460 aaPredicted RBP23.11■■□□□ 1.29
CACNB3-218ENST00000550771 TRIOO75962 3097 aa23.1■■□□□ 1.29
CACNB3-218ENST00000550771 CCNT1O60563 726 aaKnown RBP23.1■■□□□ 1.29
CACNB3-218ENST00000550771 SP100P23497 879 aaPredicted RBP23.1■■□□□ 1.29
CACNB3-218ENST00000550771 YWHABP31946 246 aaKnown RBP23.1■■□□□ 1.29
CACNB3-218ENST00000550771 AGMOQ6ZNB7 445 aa23.1■■□□□ 1.29
CACNB3-218ENST00000550771 MRPL10Q7Z7H8 261 aaKnown RBP23.1■■□□□ 1.29
CACNB3-218ENST00000550771 ZNF579Q8NAF0 562 aaKnown RBP23.1■■□□□ 1.29
CACNB3-218ENST00000550771 URGCPQ8TCY9 931 aa23.1■■□□□ 1.29
CACNB3-218ENST00000550771 LXNQ9BS40 222 aa23.1■■□□□ 1.29
CACNB3-218ENST00000550771 TSHZ2Q9NRE2 1034 aa23.1■■□□□ 1.29
CACNB3-218ENST00000550771 KANSL3Q9P2N6 904 aa23.1■■□□□ 1.29
CACNB3-218ENST00000550771 WDFY4Q6ZS81 3184 aa23.09■■□□□ 1.29
CACNB3-218ENST00000550771 C2CD4DB7Z1M9 353 aa23.09■■□□□ 1.29
CACNB3-218ENST00000550771 PFKFB2O60825 505 aa23.09■■□□□ 1.29
CACNB3-218ENST00000550771 SRGAP2CP0DJJ0 459 aa23.09■■□□□ 1.29
CACNB3-218ENST00000550771 SLC11A1P49279 550 aa23.09■■□□□ 1.29
CACNB3-218ENST00000550771 LAMTOR4Q0VGL1 99 aa23.09■■□□□ 1.29
CACNB3-218ENST00000550771 ATAT1Q5SQI0 421 aa23.09■■□□□ 1.29
CACNB3-218ENST00000550771 KIAA1841Q6NSI8 718 aa23.09■■□□□ 1.29
CACNB3-218ENST00000550771 PIK3AP1Q6ZUJ8 805 aa23.09■■□□□ 1.29
CACNB3-218ENST00000550771 OTUD6AQ7L8S5 288 aa23.09■■□□□ 1.29
CACNB3-218ENST00000550771 PPFIBP1Q86W92 1011 aa23.09■■□□□ 1.29
CACNB3-218ENST00000550771 UBALD2Q8IYN6 164 aa23.09■■□□□ 1.29
CACNB3-218ENST00000550771 KREMEN2Q8NCW0 462 aa23.09■■□□□ 1.29
CACNB3-218ENST00000550771 SLC22A17Q8WUG5 538 aa23.09■■□□□ 1.29
CACNB3-218ENST00000550771 BCL7CQ8WUZ0 217 aaPredicted RBP23.09■■□□□ 1.29
CACNB3-218ENST00000550771 TCP11Q8WWU5 503 aa23.09■■□□□ 1.29
CACNB3-218ENST00000550771 AUTS2Q8WXX7 1259 aa23.09■■□□□ 1.29
CACNB3-218ENST00000550771 TMEM143Q96AN5 459 aa23.09■■□□□ 1.29
CACNB3-218ENST00000550771 DNAJB4Q9UDY4 337 aa23.09■■□□□ 1.29
CACNB3-218ENST00000550771 SORCS3Q9UPU3 1222 aa23.09■■□□□ 1.29
CACNB3-218ENST00000550771 CNTNAP2Q9UHC6 1331 aa23.08■■□□□ 1.29
CACNB3-218ENST00000550771 ASAP2O43150 1006 aa23.08■■□□□ 1.29
CACNB3-218ENST00000550771 AVPR2P30518 371 aa23.08■■□□□ 1.29
CACNB3-218ENST00000550771 HOXA11P31270 313 aaPredicted RBP23.08■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 87.4 ms