RNA–Protein interactions for RNA: ENST00000550557.1

NR4A1-215, Transcript of nuclear receptor subfamily 4 group A member 1, humanhuman

TSL 1 (best)

Gene NR4A1, Length 4,837 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1-215ENST00000550557 CEP63Q96MT8 703 aa13.1□□□□□ -0.31
NR4A1-215ENST00000550557 TIPINQ9BVW5 301 aa13.1□□□□□ -0.31
NR4A1-215ENST00000550557 ANAPC4Q9UJX5 808 aa13.1□□□□□ -0.31
NR4A1-215ENST00000550557 FAM208AQ9UK61 1670 aaKnown RBP13.1□□□□□ -0.31
NR4A1-215ENST00000550557 PVALEFA0A1B0GWK0 134 aa13.1□□□□□ -0.31
NR4A1-215ENST00000550557 PRPSAP2O60256 369 aa13.1□□□□□ -0.31
NR4A1-215ENST00000550557 GBP1P32455 592 aa13.1□□□□□ -0.31
NR4A1-215ENST00000550557 LGSNQ5TDP6 509 aa13.1□□□□□ -0.31
NR4A1-215ENST00000550557 RFX6Q8HWS3 928 aa13.1□□□□□ -0.31
NR4A1-215ENST00000550557 SHCBP1Q8NEM2 672 aa13.1□□□□□ -0.31
NR4A1-215ENST00000550557 SAAL1Q96ER3 474 aa13.1□□□□□ -0.31
NR4A1-215ENST00000550557 PPP1R12CQ9BZL4 782 aa13.1□□□□□ -0.31
NR4A1-215ENST00000550557 SENP2Q9HC62 589 aa13.1□□□□□ -0.31
NR4A1-215ENST00000550557 MYPNQ86TC9 1320 aa13.1□□□□□ -0.31
NR4A1-215ENST00000550557 KCNA4P22459 653 aa13.1□□□□□ -0.31
NR4A1-215ENST00000550557 CROCCP2Q86T23 111 aa13.1□□□□□ -0.31
NR4A1-215ENST00000550557 PARD3BQ8TEW8 1205 aa13.1□□□□□ -0.31
NR4A1-215ENST00000550557 TAF1DQ9H5J8 278 aaPredicted RBP13.1□□□□□ -0.31
NR4A1-215ENST00000550557 KCNK9Q9NPC2 374 aa13.1□□□□□ -0.31
NR4A1-215ENST00000550557 NGRNQ9NPE2 291 aaKnown RBP13.1□□□□□ -0.31
NR4A1-215ENST00000550557 NKRFO15226 690 aaKnown RBP eCLIP13.09□□□□□ -0.31
NR4A1-215ENST00000550557 CCZ1BP86790 482 aa13.09□□□□□ -0.31
NR4A1-215ENST00000550557 CCZ1P86791 482 aaPredicted RBP13.09□□□□□ -0.31
NR4A1-215ENST00000550557 PTPROQ16827 1216 aa13.09□□□□□ -0.31
NR4A1-215ENST00000550557 MUM1L1Q5H9M0 696 aa13.09□□□□□ -0.31
NR4A1-215ENST00000550557 LRRC31Q6UY01 552 aa13.09□□□□□ -0.31
NR4A1-215ENST00000550557 DEFB128Q7Z7B8 93 aa13.09□□□□□ -0.31
NR4A1-215ENST00000550557 UBLCP1Q8WVY7 318 aaPredicted RBP13.09□□□□□ -0.31
NR4A1-215ENST00000550557 GMCL1Q96IK5 515 aa13.09□□□□□ -0.31
NR4A1-215ENST00000550557 MAP3K14Q99558 947 aa13.09□□□□□ -0.31
NR4A1-215ENST00000550557 PARD6BQ9BYG5 372 aa13.09□□□□□ -0.31
NR4A1-215ENST00000550557 ANAPC5Q9UJX4 755 aa13.09□□□□□ -0.31
NR4A1-215ENST00000550557 FBXO2Q9UK22 296 aaPredicted RBP13.09□□□□□ -0.31
NR4A1-215ENST00000550557 GOLGA8CPA6NN73 597 aa13.09□□□□□ -0.31
NR4A1-215ENST00000550557 RPLP2P05387 115 aaKnown RBP13.09□□□□□ -0.31
NR4A1-215ENST00000550557 SKIP12755 728 aa13.09□□□□□ -0.31
NR4A1-215ENST00000550557 ADORA2AP29274 412 aa13.09□□□□□ -0.31
NR4A1-215ENST00000550557 ALDH3A1P30838 453 aa13.09□□□□□ -0.31
NR4A1-215ENST00000550557 CFAP221Q4G0U5 840 aa13.09□□□□□ -0.31
NR4A1-215ENST00000550557 RUFY4Q6ZNE9 571 aa13.09□□□□□ -0.31
NR4A1-215ENST00000550557 GLYCTKQ8IVS8 523 aa13.09□□□□□ -0.31
NR4A1-215ENST00000550557 ABHD16BQ9H3Z7 469 aa13.09□□□□□ -0.31
NR4A1-215ENST00000550557 SLC38A7Q9NVC3 462 aa13.09□□□□□ -0.31
NR4A1-215ENST00000550557 NALCNQ8IZF0 1738 aa13.09□□□□□ -0.31
NR4A1-215ENST00000550557 NEMP1O14524 444 aa13.09□□□□□ -0.31
NR4A1-215ENST00000550557 ERVK-9P63128 1117 aa13.09□□□□□ -0.31
NR4A1-215ENST00000550557 ERVK-24P63145 666 aa13.09□□□□□ -0.31
NR4A1-215ENST00000550557 COASYQ13057 564 aa13.09□□□□□ -0.31
NR4A1-215ENST00000550557 TSTA3Q13630 321 aaPredicted RBP13.09□□□□□ -0.31
NR4A1-215ENST00000550557 CCDC6Q16204 474 aa13.09□□□□□ -0.31
NR4A1-215ENST00000550557 RWDD4Q6NW29 188 aaKnown RBP13.09□□□□□ -0.31
NR4A1-215ENST00000550557 B4GALNT4Q76KP1 1039 aa13.09□□□□□ -0.31
NR4A1-215ENST00000550557 METTL16Q86W50 562 aaKnown RBP13.09□□□□□ -0.31
NR4A1-215ENST00000550557 EFCAB13Q8IY85 973 aa13.09□□□□□ -0.31
NR4A1-215ENST00000550557 NDUFAF2Q8N183 169 aa13.09□□□□□ -0.31
NR4A1-215ENST00000550557 IPO11Q9UI26 975 aaKnown RBP13.09□□□□□ -0.31
NR4A1-215ENST00000550557 PRG3Q9Y2Y8 225 aaPredicted RBP13.09□□□□□ -0.31
NR4A1-215ENST00000550557 IRF6O14896 467 aa13.09□□□□□ -0.31
NR4A1-215ENST00000550557 GPR182O15218 404 aa13.09□□□□□ -0.31
NR4A1-215ENST00000550557 SLC4A1P02730 911 aa13.09□□□□□ -0.31
NR4A1-215ENST00000550557 ZBTB16Q05516 673 aa13.09□□□□□ -0.31
NR4A1-215ENST00000550557 PDIA5Q14554 519 aa13.09□□□□□ -0.31
NR4A1-215ENST00000550557 SLC35F6Q8N357 371 aa13.09□□□□□ -0.31
NR4A1-215ENST00000550557 GPATCH11Q8N954 259 aa13.09□□□□□ -0.31
NR4A1-215ENST00000550557 FAM71BQ8TC56 605 aa13.09□□□□□ -0.31
NR4A1-215ENST00000550557 TNIP3Q96KP6 325 aa13.09□□□□□ -0.31
NR4A1-215ENST00000550557 SELENOSQ9BQE4 189 aa13.09□□□□□ -0.31
NR4A1-215ENST00000550557 HTATIP2Q9BUP3 242 aa13.09□□□□□ -0.31
NR4A1-215ENST00000550557 TSPYL2Q9H2G4 693 aaPredicted RBP13.09□□□□□ -0.31
NR4A1-215ENST00000550557 HAUS4Q9H6D7 363 aa13.09□□□□□ -0.31
NR4A1-215ENST00000550557 PRMT7Q9NVM4 692 aaPredicted RBP13.09□□□□□ -0.31
NR4A1-215ENST00000550557 ZNF148Q9UQR1 794 aa13.09□□□□□ -0.31
NR4A1-215ENST00000550557 SOWAHDA6NJG2 315 aa13.08□□□□□ -0.32
NR4A1-215ENST00000550557 PP2D1A8MPX8 630 aa13.08□□□□□ -0.32
NR4A1-215ENST00000550557 HOXA2O43364 376 aa13.08□□□□□ -0.32
NR4A1-215ENST00000550557 PTPRAP18433 802 aa13.08□□□□□ -0.32
NR4A1-215ENST00000550557 GPD1LQ8N335 351 aa13.08□□□□□ -0.32
NR4A1-215ENST00000550557 CAPNS2Q96L46 248 aa13.08□□□□□ -0.32
NR4A1-215ENST00000550557 PANX2Q96RD6 677 aa13.08□□□□□ -0.32
NR4A1-215ENST00000550557 CALN1Q9BXU9 219 aa13.08□□□□□ -0.32
NR4A1-215ENST00000550557 SAMD15Q9P1V8 674 aa13.08□□□□□ -0.32
NR4A1-215ENST00000550557 TUBE1Q9UJT0 475 aa13.08□□□□□ -0.32
NR4A1-215ENST00000550557 FARP1Q9Y4F1 1045 aaPredicted RBP13.08□□□□□ -0.32
NR4A1-215ENST00000550557 CCDC151A5D8V7 595 aa13.08□□□□□ -0.32
NR4A1-215ENST00000550557 MSCO60682 206 aa13.08□□□□□ -0.32
NR4A1-215ENST00000550557 HEXIM1O94992 359 aaKnown RBP13.08□□□□□ -0.32
NR4A1-215ENST00000550557 ACTR2P61160 394 aa13.08□□□□□ -0.32
NR4A1-215ENST00000550557 TOGARAM2Q6ZUX3 1019 aa13.08□□□□□ -0.32
NR4A1-215ENST00000550557 SPATA2LQ8IUW3 424 aaPredicted RBP13.08□□□□□ -0.32
NR4A1-215ENST00000550557 CTAGE3PQ8IX95 158 aa13.08□□□□□ -0.32
NR4A1-215ENST00000550557 TMEM35BQ8NCS4 154 aa13.08□□□□□ -0.32
NR4A1-215ENST00000550557 GDAP1Q8TB36 358 aa13.08□□□□□ -0.32
NR4A1-215ENST00000550557 MED4Q9NPJ6 270 aa13.08□□□□□ -0.32
NR4A1-215ENST00000550557 MAN1A1P33908 653 aa13.08□□□□□ -0.32
NR4A1-215ENST00000550557 KNOP1Q1ED39 458 aaKnown RBP13.08□□□□□ -0.32
NR4A1-215ENST00000550557 MOB2Q70IA6 237 aa13.08□□□□□ -0.32
NR4A1-215ENST00000550557 GMCL1P1Q8NEA9 526 aa13.08□□□□□ -0.32
NR4A1-215ENST00000550557 NMRK2Q9NPI5 230 aa13.08□□□□□ -0.32
NR4A1-215ENST00000550557 TYW1Q9NV66 732 aaKnown RBP13.08□□□□□ -0.32
NR4A1-215ENST00000550557 EPN1Q9Y6I3 576 aaPredicted RBP13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms