RNA–Protein interactions for RNA: ENST00000550406.1

RAB5C-206, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5C, Length 500 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-206ENST00000550406 PARVGQ9HBI0 331 aa14.41□□□□□ -0.1
RAB5C-206ENST00000550406 PANK4Q9NVE7 773 aa14.41□□□□□ -0.1
RAB5C-206ENST00000550406 ARHGAP28Q9P2N2 729 aa14.41□□□□□ -0.1
RAB5C-206ENST00000550406 ST3GAL5Q9UNP4 418 aa14.41□□□□□ -0.1
RAB5C-206ENST00000550406 TTLL13PA6NNM8 815 aa14.4□□□□□ -0.1
RAB5C-206ENST00000550406 CCDC169A6NNP5 214 aa14.4□□□□□ -0.1
RAB5C-206ENST00000550406 MGEA5O60502 916 aa14.4□□□□□ -0.1
RAB5C-206ENST00000550406 RPS6KA5O75582 802 aa14.4□□□□□ -0.1
RAB5C-206ENST00000550406 IDEP14735 1019 aa14.4□□□□□ -0.1
RAB5C-206ENST00000550406 NMT1P30419 496 aaKnown RBP14.4□□□□□ -0.1
RAB5C-206ENST00000550406 PHKA2P46019 1235 aa14.4□□□□□ -0.1
RAB5C-206ENST00000550406 NCKAP1LP55160 1127 aa14.4□□□□□ -0.1
RAB5C-206ENST00000550406 ASIC1P78348 528 aa14.4□□□□□ -0.1
RAB5C-206ENST00000550406 COASYQ13057 564 aa14.4□□□□□ -0.1
RAB5C-206ENST00000550406 PPIGQ13427 754 aaKnown RBP eCLIP14.4□□□□□ -0.11e-6■□□□□ 8.9
RAB5C-206ENST00000550406 PNOCQ13519 176 aa14.4□□□□□ -0.1
RAB5C-206ENST00000550406 PPP2R5AQ15172 486 aa14.4□□□□□ -0.1
RAB5C-206ENST00000550406 AMHR2Q16671 573 aa14.4□□□□□ -0.1
RAB5C-206ENST00000550406 TMEM240Q5SV17 173 aa14.4□□□□□ -0.1
RAB5C-206ENST00000550406 ODR4Q5SWX8 454 aa14.4□□□□□ -0.1
RAB5C-206ENST00000550406 UNC13DQ70J99 1090 aa14.4□□□□□ -0.1
RAB5C-206ENST00000550406 RTN4RL1Q86UN2 441 aaPredicted RBP14.4□□□□□ -0.1
RAB5C-206ENST00000550406 ELOA2Q8IYF1 753 aaPredicted RBP14.4□□□□□ -0.1
RAB5C-206ENST00000550406 USP38Q8NB14 1042 aa14.4□□□□□ -0.1
RAB5C-206ENST00000550406 TMEM161BQ8NDZ6 487 aa14.4□□□□□ -0.1
RAB5C-206ENST00000550406 LINC01599Q8WXQ3 324 aa14.4□□□□□ -0.1
RAB5C-206ENST00000550406 ERCC4Q92889 916 aaPredicted RBP14.4□□□□□ -0.1
RAB5C-206ENST00000550406 SCLT1Q96NL6 688 aa14.4□□□□□ -0.1
RAB5C-206ENST00000550406 GDF15Q99988 308 aa14.4□□□□□ -0.1
RAB5C-206ENST00000550406 LBHD1Q9BQE6 289 aaPredicted RBP14.4□□□□□ -0.1
RAB5C-206ENST00000550406 STRA6Q9BX79 667 aa14.4□□□□□ -0.1
RAB5C-206ENST00000550406 FZD8Q9H461 694 aa14.4□□□□□ -0.1
RAB5C-206ENST00000550406 ZHX3Q9H4I2 956 aa14.4□□□□□ -0.1
RAB5C-206ENST00000550406 KMT5AQ9NQR1 393 aa14.4□□□□□ -0.1
RAB5C-206ENST00000550406 USP20Q9Y2K6 914 aa14.4□□□□□ -0.1
RAB5C-206ENST00000550406 PVALEFA0A1B0GWK0 134 aa14.39□□□□□ -0.11
RAB5C-206ENST00000550406 TRAK2O60296 914 aa14.39□□□□□ -0.11
RAB5C-206ENST00000550406 TBCAO75347 108 aaKnown RBP14.39□□□□□ -0.11
RAB5C-206ENST00000550406 GAP43P17677 238 aa14.39□□□□□ -0.11
RAB5C-206ENST00000550406 HOXA11P31270 313 aaPredicted RBP14.39□□□□□ -0.11
RAB5C-206ENST00000550406 DMP1Q13316 513 aaPredicted RBP14.39□□□□□ -0.11
RAB5C-206ENST00000550406 DSC3Q14574 896 aa14.39□□□□□ -0.11
RAB5C-206ENST00000550406 POSTNQ15063 836 aa14.39□□□□□ -0.11
RAB5C-206ENST00000550406 KMT5BQ4FZB7 885 aa14.39□□□□□ -0.11
RAB5C-206ENST00000550406 HERC4Q5GLZ8 1057 aaPredicted RBP14.39□□□□□ -0.11
RAB5C-206ENST00000550406 KANK3Q6NY19 840 aa14.39□□□□□ -0.11
RAB5C-206ENST00000550406 ZNF365Q70YC5 407 aa14.39□□□□□ -0.11
RAB5C-206ENST00000550406 ZNF720Q7Z2F6 126 aa14.39□□□□□ -0.11
RAB5C-206ENST00000550406 GLIS3Q8NEA6 775 aa14.39□□□□□ -0.11
RAB5C-206ENST00000550406 KCNN1Q92952 543 aa14.39□□□□□ -0.11
RAB5C-206ENST00000550406 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.39□□□□□ -0.113e-6■■■■□ 22.3
RAB5C-206ENST00000550406 IFIH1Q9BYX4 1025 aaKnown RBP14.39□□□□□ -0.11
RAB5C-206ENST00000550406 TMEM134Q9H6X4 195 aa14.39□□□□□ -0.11
RAB5C-206ENST00000550406 TBC1D7Q9P0N9 293 aa14.39□□□□□ -0.11
RAB5C-206ENST00000550406 LARSQ9P2J5 1176 aaKnown RBP14.39□□□□□ -0.11
RAB5C-206ENST00000550406 TTC3P53804 2025 aa14.38□□□□□ -0.11
RAB5C-206ENST00000550406 GOLGA6L22H0YM25 854 aa14.38□□□□□ -0.11
RAB5C-206ENST00000550406 TSPAN1O60635 241 aa14.38□□□□□ -0.11
RAB5C-206ENST00000550406 KINO60870 393 aaKnown RBP14.38□□□□□ -0.11
RAB5C-206ENST00000550406 PPP1R37O75864 691 aa14.38□□□□□ -0.11
RAB5C-206ENST00000550406 RPN1P04843 607 aaKnown RBP14.38□□□□□ -0.11
RAB5C-206ENST00000550406 MYL1P05976 194 aa14.38□□□□□ -0.11
RAB5C-206ENST00000550406 MAPTP10636 758 aaKnown RBP14.38□□□□□ -0.11
RAB5C-206ENST00000550406 CASP5P51878 434 aa14.38□□□□□ -0.11
RAB5C-206ENST00000550406 NFX1Q12986 1120 aaKnown RBP14.38□□□□□ -0.11
RAB5C-206ENST00000550406 PAK2Q13177 524 aa14.38□□□□□ -0.11
RAB5C-206ENST00000550406 FAM187BQ17R55 369 aa14.38□□□□□ -0.11
RAB5C-206ENST00000550406 ZC2HC1CQ53FD0 456 aaPredicted RBP14.38□□□□□ -0.11
RAB5C-206ENST00000550406 NT5DC1Q5TFE4 455 aa14.38□□□□□ -0.11
RAB5C-206ENST00000550406 CNKSR3Q6P9H4 555 aa14.38□□□□□ -0.11
RAB5C-206ENST00000550406 PPP4R3CPQ6ZMV5 832 aa14.38□□□□□ -0.11
RAB5C-206ENST00000550406 HAUS6Q7Z4H7 955 aa14.38□□□□□ -0.11
RAB5C-206ENST00000550406 FAM178BQ8IXR5 827 aa14.38□□□□□ -0.11
RAB5C-206ENST00000550406 CCDC65Q8IXS2 484 aa14.38□□□□□ -0.11
RAB5C-206ENST00000550406 RPUSD2Q8IZ73 545 aaKnown RBP14.38□□□□□ -0.11
RAB5C-206ENST00000550406 SPATA20Q8TB22 786 aa14.38□□□□□ -0.11
RAB5C-206ENST00000550406 DEPTORQ8TB45 409 aa14.38□□□□□ -0.11
RAB5C-206ENST00000550406 SEPT8Q92599 483 aa14.38□□□□□ -0.11
RAB5C-206ENST00000550406 INO80BQ9C086 356 aaPredicted RBP14.38□□□□□ -0.11
RAB5C-206ENST00000550406 C2orf40Q9H1Z8 148 aa14.38□□□□□ -0.11
RAB5C-206ENST00000550406 ST6GALNAC4Q9H4F1 302 aa14.38□□□□□ -0.11
RAB5C-206ENST00000550406 SEL1LQ9UBV2 794 aa14.38□□□□□ -0.11
RAB5C-206ENST00000550406 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.37□□□□□ -0.11
RAB5C-206ENST00000550406 DENND3A2RUS2 1198 aa14.37□□□□□ -0.11
RAB5C-206ENST00000550406 INO80B-WBP1J3KQ70 363 aa14.37□□□□□ -0.11
RAB5C-206ENST00000550406 ENPP3O14638 875 aa14.37□□□□□ -0.11
RAB5C-206ENST00000550406 GPR182O15218 404 aa14.37□□□□□ -0.11
RAB5C-206ENST00000550406 B4GALT5O43286 388 aa14.37□□□□□ -0.11
RAB5C-206ENST00000550406 MYBP10242 640 aa14.37□□□□□ -0.11
RAB5C-206ENST00000550406 SARSP49591 514 aaKnown RBP14.37□□□□□ -0.11
RAB5C-206ENST00000550406 GTF2BQ00403 316 aa14.37□□□□□ -0.11
RAB5C-206ENST00000550406 C9orf50Q5SZB4 431 aa14.37□□□□□ -0.11
RAB5C-206ENST00000550406 CATSPER4Q7RTX7 472 aa14.37□□□□□ -0.11
RAB5C-206ENST00000550406 ZBTB8OSQ8IWT0 167 aa14.37□□□□□ -0.11
RAB5C-206ENST00000550406 IKZF4Q9H2S9 585 aa14.37□□□□□ -0.11
RAB5C-206ENST00000550406 PRO3102Q9H379 93 aa14.37□□□□□ -0.11
RAB5C-206ENST00000550406 OLFML3Q9NRN5 406 aa14.37□□□□□ -0.11
RAB5C-206ENST00000550406 KCNG1Q9UIX4 513 aa14.37□□□□□ -0.11
RAB5C-206ENST00000550406 PCDHA5Q9Y5H7 936 aa14.37□□□□□ -0.11
RAB5C-206ENST00000550406 GBF1Q92538 1859 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms