RNA–Protein interactions for RNA: ENST00000550069.1

PFDN5-209, Transcript of prefoldin subunit 5, humanhuman

TSL 2

Gene PFDN5, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-209ENST00000550069 SPATA9Q9BWV2 254 aa6.58□□□□□ -1.36
PFDN5-209ENST00000550069 CCDC113Q9H0I3 377 aa6.58□□□□□ -1.36
PFDN5-209ENST00000550069 CNNM1Q9NRU3 951 aa6.58□□□□□ -1.36
PFDN5-209ENST00000550069 GNL3LQ9NVN8 582 aaKnown RBP6.58□□□□□ -1.36
PFDN5-209ENST00000550069 SIRPGQ9P1W8 387 aa6.58□□□□□ -1.36
PFDN5-209ENST00000550069 ECM29Q5VYK3 1845 aa6.57□□□□□ -1.36
PFDN5-209ENST00000550069 MAST3O60307 1309 aa6.57□□□□□ -1.36
PFDN5-209ENST00000550069 ARAP2Q8WZ64 1704 aa6.57□□□□□ -1.36
PFDN5-209ENST00000550069 F8W031 263 aaPredicted RBP6.57□□□□□ -1.36
PFDN5-209ENST00000550069 TCERG1O14776 1098 aaKnown RBP6.57□□□□□ -1.36
PFDN5-209ENST00000550069 NPHS1O60500 1241 aa6.57□□□□□ -1.36
PFDN5-209ENST00000550069 BCAR3O75815 825 aa6.57□□□□□ -1.36
PFDN5-209ENST00000550069 MAP4K4O95819 1239 aaPredicted RBP6.57□□□□□ -1.36
PFDN5-209ENST00000550069 CYBBP04839 570 aa6.57□□□□□ -1.36
PFDN5-209ENST00000550069 MED14OSP0DP75 135 aa6.57□□□□□ -1.36
PFDN5-209ENST00000550069 PABPC1P11940 636 aaKnown RBP6.57□□□□□ -1.36
PFDN5-209ENST00000550069 KCNJ4P48050 445 aa6.57□□□□□ -1.36
PFDN5-209ENST00000550069 PRR5P85299 388 aa6.57□□□□□ -1.36
PFDN5-209ENST00000550069 ATP8B2P98198 1209 aa6.57□□□□□ -1.36
PFDN5-209ENST00000550069 CHRNDQ07001 517 aa6.57□□□□□ -1.36
PFDN5-209ENST00000550069 PUM3Q15397 648 aaKnown RBP6.57□□□□□ -1.36
PFDN5-209ENST00000550069 SF3A1Q15459 793 aaKnown RBP6.57□□□□□ -1.36
PFDN5-209ENST00000550069 TESK1Q15569 626 aa6.57□□□□□ -1.36
PFDN5-209ENST00000550069 FAM209AQ5JX71 171 aa6.57□□□□□ -1.36
PFDN5-209ENST00000550069 ACBD5Q5T8D3 534 aaPredicted RBP6.57□□□□□ -1.36
PFDN5-209ENST00000550069 LCE3BQ5TA77 95 aa6.57□□□□□ -1.36
PFDN5-209ENST00000550069 CIAPIN1Q6FI81 312 aa6.57□□□□□ -1.36
PFDN5-209ENST00000550069 USP53Q70EK8 1073 aa6.57□□□□□ -1.36
PFDN5-209ENST00000550069 IGDCC3Q8IVU1 814 aa6.57□□□□□ -1.36
PFDN5-209ENST00000550069 C16orf71Q8IYS4 520 aaPredicted RBP6.57□□□□□ -1.36
PFDN5-209ENST00000550069 PANK1Q8TE04 598 aa6.57□□□□□ -1.36
PFDN5-209ENST00000550069 SSH3Q8TE77 659 aa6.57□□□□□ -1.36
PFDN5-209ENST00000550069 LPIN2Q92539 896 aa6.57□□□□□ -1.36
PFDN5-209ENST00000550069 SGSM3Q96HU1 749 aa6.57□□□□□ -1.36
PFDN5-209ENST00000550069 KAZALD1Q96I82 304 aa6.57□□□□□ -1.36
PFDN5-209ENST00000550069 SUCLG2Q96I99 432 aa6.57□□□□□ -1.36
PFDN5-209ENST00000550069 EXOC2Q96KP1 924 aa6.57□□□□□ -1.36
PFDN5-209ENST00000550069 BICC1Q9H694 974 aaKnown RBP6.57□□□□□ -1.36
PFDN5-209ENST00000550069 EPB41L4AQ9HCS5 686 aaPredicted RBP6.57□□□□□ -1.36
PFDN5-209ENST00000550069 SMG5Q9UPR3 1016 aaKnown RBP6.57□□□□□ -1.36
PFDN5-209ENST00000550069 RIPOR2Q9Y4F9 1068 aa6.57□□□□□ -1.36
PFDN5-209ENST00000550069 TRPM7Q96QT4 1865 aa6.56□□□□□ -1.36
PFDN5-209ENST00000550069 NPIPB6E9PJ23 425 aa6.56□□□□□ -1.36
PFDN5-209ENST00000550069 H7C1D1 291 aa6.56□□□□□ -1.36
PFDN5-209ENST00000550069 AGRPO00253 132 aa6.56□□□□□ -1.36
PFDN5-209ENST00000550069 RAB11FIP3O75154 756 aa6.56□□□□□ -1.36
PFDN5-209ENST00000550069 UFL1O94874 794 aa6.56□□□□□ -1.36
PFDN5-209ENST00000550069 SASH1O94885 1247 aa6.56□□□□□ -1.36
PFDN5-209ENST00000550069 TPM2P07951 284 aa6.56□□□□□ -1.36
PFDN5-209ENST00000550069 VIL1P09327 827 aaKnown RBP6.56□□□□□ -1.36
PFDN5-209ENST00000550069 SLC5A1P13866 664 aa6.56□□□□□ -1.36
PFDN5-209ENST00000550069 IL1R1P14778 569 aa6.56□□□□□ -1.36
PFDN5-209ENST00000550069 GLDCP23378 1020 aa6.56□□□□□ -1.36
PFDN5-209ENST00000550069 MC3RP41968 323 aa6.56□□□□□ -1.36
PFDN5-209ENST00000550069 MAP4K2Q12851 820 aa6.56□□□□□ -1.36
PFDN5-209ENST00000550069 WWC2Q6AWC2 1192 aa6.56□□□□□ -1.36
PFDN5-209ENST00000550069 PAQR3Q6TCH7 311 aa6.56□□□□□ -1.36
PFDN5-209ENST00000550069 LDHDQ86WU2 507 aa6.56□□□□□ -1.36
PFDN5-209ENST00000550069 C1QL4Q86Z23 238 aa6.56□□□□□ -1.36
PFDN5-209ENST00000550069 CERS3Q8IU89 383 aa6.56□□□□□ -1.36
PFDN5-209ENST00000550069 KRTAP1-3Q8IUG1 177 aa6.56□□□□□ -1.36
PFDN5-209ENST00000550069 TMEM57Q8N5G2 664 aa6.56□□□□□ -1.36
PFDN5-209ENST00000550069 ANKRD44Q8N8A2 993 aa6.56□□□□□ -1.36
PFDN5-209ENST00000550069 SMC1BQ8NDV3 1235 aa6.56□□□□□ -1.36
PFDN5-209ENST00000550069 SRPK1Q96SB4 655 aaKnown RBP6.56□□□□□ -1.36
PFDN5-209ENST00000550069 DNAJC7Q99615 494 aa6.56□□□□□ -1.36
PFDN5-209ENST00000550069 SLC38A3Q99624 504 aa6.56□□□□□ -1.36
PFDN5-209ENST00000550069 SYT3Q9BQG1 590 aa6.56□□□□□ -1.36
PFDN5-209ENST00000550069 CDIP1Q9H305 208 aa6.56□□□□□ -1.36
PFDN5-209ENST00000550069 HACL1Q9UJ83 578 aa6.56□□□□□ -1.36
PFDN5-209ENST00000550069 HDAC9Q9UKV0 1011 aa6.56□□□□□ -1.36
PFDN5-209ENST00000550069 PCDHA2Q9Y5H9 948 aa6.56□□□□□ -1.36
PFDN5-209ENST00000550069 NPFFR2Q9Y5X5 522 aa6.56□□□□□ -1.36
PFDN5-209ENST00000550069 FAM205AQ6ZU69 1335 aa6.55□□□□□ -1.36
PFDN5-209ENST00000550069 COL1A1P02452 1464 aaPredicted RBP6.55□□□□□ -1.36
PFDN5-209ENST00000550069 TRBV23OR9-2A0A075B6M9 112 aa6.55□□□□□ -1.36
PFDN5-209ENST00000550069 A0A1W2PQJ5 194 aa6.55□□□□□ -1.36
PFDN5-209ENST00000550069 C22orf46C9J442 243 aa6.55□□□□□ -1.36
PFDN5-209ENST00000550069 HRKO00198 91 aa6.55□□□□□ -1.36
PFDN5-209ENST00000550069 CPP00450 1065 aa6.55□□□□□ -1.36
PFDN5-209ENST00000550069 FGFR1P11362 822 aa6.55□□□□□ -1.36
PFDN5-209ENST00000550069 LTBRP36941 435 aa6.55□□□□□ -1.36
PFDN5-209ENST00000550069 RFX5P48382 616 aaPredicted RBP6.55□□□□□ -1.36
PFDN5-209ENST00000550069 MAPKAPK2P49137 400 aa6.55□□□□□ -1.36
PFDN5-209ENST00000550069 JAG1P78504 1218 aa6.55□□□□□ -1.36
PFDN5-209ENST00000550069 GPSM2P81274 684 aa6.55□□□□□ -1.36
PFDN5-209ENST00000550069 G3BP1Q13283 466 aaKnown RBP eCLIP6.55□□□□□ -1.36
PFDN5-209ENST00000550069 BMS1Q14692 1282 aaKnown RBP6.55□□□□□ -1.36
PFDN5-209ENST00000550069 E4F1Q66K89 784 aaPredicted RBP6.55□□□□□ -1.36
PFDN5-209ENST00000550069 NSMFQ6X4W1 530 aa6.55□□□□□ -1.36
PFDN5-209ENST00000550069 ITPRIPQ8IWB1 547 aa6.55□□□□□ -1.36
PFDN5-209ENST00000550069 DHX37Q8IY37 1157 aaKnown RBP6.55□□□□□ -1.36
PFDN5-209ENST00000550069 VGLL2Q8N8G2 317 aa6.55□□□□□ -1.36
PFDN5-209ENST00000550069 WDR66Q8TBY9 1149 aa6.55□□□□□ -1.36
PFDN5-209ENST00000550069 KCTD13Q8WZ19 329 aa6.55□□□□□ -1.36
PFDN5-209ENST00000550069 PHF20Q9BVI0 1012 aa6.55□□□□□ -1.36
PFDN5-209ENST00000550069 KANSL2Q9H9L4 492 aa6.55□□□□□ -1.36
PFDN5-209ENST00000550069 ZNF277Q9NRM2 450 aaPredicted RBP6.55□□□□□ -1.36
PFDN5-209ENST00000550069 ADARB2Q9NS39 739 aaKnown RBP6.55□□□□□ -1.36
PFDN5-209ENST00000550069 ZBTB40Q9NUA8 1239 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms