RNA–Protein interactions for RNA: ENST00000548877.1

CDX2-202, Transcript of caudal type homeobox 2, humanhuman

TSL 3

Gene CDX2, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2-202ENST00000548877 KRBA1A5PL33 1030 aa15.26■□□□□ 0.03
CDX2-202ENST00000548877 ZBTB43O43298 467 aa15.26■□□□□ 0.03
CDX2-202ENST00000548877 N4BP1O75113 896 aaKnown RBP15.26■□□□□ 0.03
CDX2-202ENST00000548877 C1RP00736 705 aa15.26■□□□□ 0.03
CDX2-202ENST00000548877 CNPP09543 421 aaKnown RBP15.26■□□□□ 0.03
CDX2-202ENST00000548877 SLC11A1P49279 550 aa15.26■□□□□ 0.03
CDX2-202ENST00000548877 RAB27AP51159 221 aa15.26■□□□□ 0.03
CDX2-202ENST00000548877 EXOSC10Q01780 885 aaKnown RBP15.26■□□□□ 0.03
CDX2-202ENST00000548877 PRKCEQ02156 737 aa15.26■□□□□ 0.03
CDX2-202ENST00000548877 TBC1D8BQ0IIM8 1120 aa15.26■□□□□ 0.03
CDX2-202ENST00000548877 PUM1Q14671 1186 aaKnown RBP eCLIP15.26■□□□□ 0.03
CDX2-202ENST00000548877 PFKFB3Q16875 520 aaPredicted RBP15.26■□□□□ 0.03
CDX2-202ENST00000548877 PHLDB3Q6NSJ2 640 aa15.26■□□□□ 0.03
CDX2-202ENST00000548877 TRMT1LQ7Z2T5 733 aaKnown RBP15.26■□□□□ 0.03
CDX2-202ENST00000548877 NLRP7Q8WX94 980 aa15.26■□□□□ 0.03
CDX2-202ENST00000548877 ZNF668Q96K58 619 aaPredicted RBP15.26■□□□□ 0.03
CDX2-202ENST00000548877 NIFKQ9BYG3 293 aaKnown RBP15.26■□□□□ 0.03
CDX2-202ENST00000548877 WDR6Q9NNW5 1121 aaKnown RBP15.26■□□□□ 0.03
CDX2-202ENST00000548877 FAM105AQ9NUU6 356 aa15.26■□□□□ 0.03
CDX2-202ENST00000548877 DLL3Q9NYJ7 618 aa15.26■□□□□ 0.03
CDX2-202ENST00000548877 DNAJB4Q9UDY4 337 aa15.26■□□□□ 0.03
CDX2-202ENST00000548877 BRPF3Q9ULD4 1205 aa15.26■□□□□ 0.03
CDX2-202ENST00000548877 ADAMTS3O15072 1205 aa15.25■□□□□ 0.03
CDX2-202ENST00000548877 NARSO43776 548 aaKnown RBP15.25■□□□□ 0.03
CDX2-202ENST00000548877 B4GALT3O60512 393 aa15.25■□□□□ 0.03
CDX2-202ENST00000548877 EFEMP2O95967 443 aa15.25■□□□□ 0.03
CDX2-202ENST00000548877 SFPQP23246 707 aaKnown RBP eCLIP15.25■□□□□ 0.03
CDX2-202ENST00000548877 KLRC2P26717 231 aa15.25■□□□□ 0.03
CDX2-202ENST00000548877 SFNP31947 248 aa15.25■□□□□ 0.03
CDX2-202ENST00000548877 DRP2Q13474 957 aa15.25■□□□□ 0.03
CDX2-202ENST00000548877 NONOQ15233 471 aaKnown RBP eCLIP15.25■□□□□ 0.03
CDX2-202ENST00000548877 DGLUCYQ7Z3D6 616 aa15.25■□□□□ 0.03
CDX2-202ENST00000548877 ZNF410Q86VK4 478 aa15.25■□□□□ 0.03
CDX2-202ENST00000548877 LPPQ93052 612 aa15.25■□□□□ 0.03
CDX2-202ENST00000548877 RIT2Q99578 217 aa15.25■□□□□ 0.03
CDX2-202ENST00000548877 TMEM175Q9BSA9 504 aa15.25■□□□□ 0.03
CDX2-202ENST00000548877 INO80BQ9C086 356 aaPredicted RBP15.25■□□□□ 0.03
CDX2-202ENST00000548877 DLGAP2Q9P1A6 1054 aa15.25■□□□□ 0.03
CDX2-202ENST00000548877 SAMM50Q9Y512 469 aa15.25■□□□□ 0.03
CDX2-202ENST00000548877 CACNA1BQ00975 2339 aa15.25■□□□□ 0.03
CDX2-202ENST00000548877 CACNA1IQ9P0X4 2223 aa15.24■□□□□ 0.03
CDX2-202ENST00000548877 MEIS3P2A8K0S8 358 aa15.24■□□□□ 0.03
CDX2-202ENST00000548877 EDIL3O43854 480 aa15.24■□□□□ 0.03
CDX2-202ENST00000548877 CSDE1O75534 798 aaKnown RBP15.24■□□□□ 0.03
CDX2-202ENST00000548877 STBD1O95210 358 aa15.24■□□□□ 0.03
CDX2-202ENST00000548877 SRFP11831 508 aa15.24■□□□□ 0.03
CDX2-202ENST00000548877 UGCGQ16739 394 aa15.24■□□□□ 0.03
CDX2-202ENST00000548877 PRR16Q569H4 304 aa15.24■□□□□ 0.03
CDX2-202ENST00000548877 TWF2Q6IBS0 349 aaKnown RBP15.24■□□□□ 0.03
CDX2-202ENST00000548877 MRPL10Q7Z7H8 261 aaKnown RBP15.24■□□□□ 0.03
CDX2-202ENST00000548877 ZNF280BQ86YH2 543 aa15.24■□□□□ 0.03
CDX2-202ENST00000548877 REXO1Q8N1G1 1221 aaKnown RBP15.24■□□□□ 0.03
CDX2-202ENST00000548877 SLC44A3Q8N4M1 653 aa15.24■□□□□ 0.03
CDX2-202ENST00000548877 RDM1Q8NG50 284 aa15.24■□□□□ 0.03
CDX2-202ENST00000548877 STAMQ92783 540 aa15.24■□□□□ 0.03
CDX2-202ENST00000548877 BORCS6Q96GS4 357 aa15.24■□□□□ 0.03
CDX2-202ENST00000548877 SCLT1Q96NL6 688 aa15.24■□□□□ 0.03
CDX2-202ENST00000548877 C6orf50Q9HD87 102 aa15.24■□□□□ 0.03
CDX2-202ENST00000548877 MRPL17Q9NRX2 175 aaKnown RBP15.24■□□□□ 0.03
CDX2-202ENST00000548877 DPP7Q9UHL4 492 aa15.24■□□□□ 0.03
CDX2-202ENST00000548877 A0A087WZ62 844 aa15.23■□□□□ 0.03
CDX2-202ENST00000548877 DDHD2O94830 711 aa15.23■□□□□ 0.03
CDX2-202ENST00000548877 ALDH2P05091 517 aa15.23■□□□□ 0.03
CDX2-202ENST00000548877 CDC27P30260 824 aa15.23■□□□□ 0.03
CDX2-202ENST00000548877 JAK3P52333 1124 aa15.23■□□□□ 0.03
CDX2-202ENST00000548877 RNASELQ05823 741 aaKnown RBP15.23■□□□□ 0.03
CDX2-202ENST00000548877 ZC3H14Q6PJT7 736 aaKnown RBP15.23■□□□□ 0.03
CDX2-202ENST00000548877 B3GNT9Q6UX72 402 aa15.23■□□□□ 0.03
CDX2-202ENST00000548877 AGMOQ6ZNB7 445 aa15.23■□□□□ 0.03
CDX2-202ENST00000548877 RNF168Q8IYW5 571 aaPredicted RBP15.23■□□□□ 0.03
CDX2-202ENST00000548877 KCNG4Q8TDN1 519 aa15.23■□□□□ 0.03
CDX2-202ENST00000548877 CCDC12Q8WUD4 166 aaPredicted RBP15.23■□□□□ 0.03
CDX2-202ENST00000548877 HDAC7Q8WUI4 952 aa15.23■□□□□ 0.03
CDX2-202ENST00000548877 RUBCNQ92622 972 aa15.23■□□□□ 0.03
CDX2-202ENST00000548877 SLC5A5Q92911 643 aa15.23■□□□□ 0.03
CDX2-202ENST00000548877 PGBD4Q96DM1 585 aa15.23■□□□□ 0.03
CDX2-202ENST00000548877 RPS6KC1Q96S38 1066 aa15.23■□□□□ 0.03
CDX2-202ENST00000548877 FDXACB1Q9BRP7 624 aaPredicted RBP15.23■□□□□ 0.03
CDX2-202ENST00000548877 ESYT1Q9BSJ8 1104 aa15.23■□□□□ 0.03
CDX2-202ENST00000548877 RXFP1Q9HBX9 757 aa15.23■□□□□ 0.03
CDX2-202ENST00000548877 KANSL3Q9P2N6 904 aa15.23■□□□□ 0.03
CDX2-202ENST00000548877 SSX2IPQ9Y2D8 614 aa15.23■□□□□ 0.03
CDX2-202ENST00000548877 NCOR2Q9Y618 2525 aa15.23■□□□□ 0.03
CDX2-202ENST00000548877 CLUHO75153 1309 aa15.22■□□□□ 0.03
CDX2-202ENST00000548877 CNTNAP2Q9UHC6 1331 aa15.22■□□□□ 0.03
CDX2-202ENST00000548877 MSH4O15457 936 aa15.22■□□□□ 0.03
CDX2-202ENST00000548877 SOD2P04179 222 aa15.22■□□□□ 0.03
CDX2-202ENST00000548877 CFHP08603 1231 aa15.22■□□□□ 0.03
CDX2-202ENST00000548877 SP9P0CG40 484 aa15.22■□□□□ 0.03
CDX2-202ENST00000548877 GNA11P29992 359 aa15.22■□□□□ 0.03
CDX2-202ENST00000548877 DNM2P50570 870 aa15.22■□□□□ 0.03
CDX2-202ENST00000548877 USP11P51784 963 aa15.22■□□□□ 0.03
CDX2-202ENST00000548877 TSGA10IPQ3SY00 556 aa15.22■□□□□ 0.03
CDX2-202ENST00000548877 XKR3Q5GH77 459 aa15.22■□□□□ 0.03
CDX2-202ENST00000548877 ELMSAN1Q6PJG2 1045 aa15.22■□□□□ 0.03
CDX2-202ENST00000548877 DHX32Q7L7V1 743 aaKnown RBP15.22■□□□□ 0.03
CDX2-202ENST00000548877 KIAA2013Q8IYS2 634 aa15.22■□□□□ 0.03
CDX2-202ENST00000548877 URGCPQ8TCY9 931 aa15.22■□□□□ 0.03
CDX2-202ENST00000548877 RSAD2Q8WXG1 361 aa15.22■□□□□ 0.03
CDX2-202ENST00000548877 HERC2P3Q9BVR0 1158 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms