RNA–Protein interactions for RNA: ENST00000548874.5

CACNB3-210, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 581 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-210ENST00000548874 TSHZ1Q6ZSZ6 1077 aa23.27■■□□□ 1.32
CACNB3-210ENST00000548874 TMEM199Q8N511 208 aa23.27■■□□□ 1.32
CACNB3-210ENST00000548874 TMEM161BQ8NDZ6 487 aa23.27■■□□□ 1.32
CACNB3-210ENST00000548874 SPATA20Q8TB22 786 aa23.27■■□□□ 1.32
CACNB3-210ENST00000548874 BADQ92934 168 aa23.27■■□□□ 1.32
CACNB3-210ENST00000548874 INO80BQ9C086 356 aaPredicted RBP23.27■■□□□ 1.32
CACNB3-210ENST00000548874 CCDC113Q9H0I3 377 aa23.27■■□□□ 1.32
CACNB3-210ENST00000548874 CLSTN2Q9H4D0 955 aa23.27■■□□□ 1.32
CACNB3-210ENST00000548874 AGO3Q9H9G7 860 aaKnown RBP23.27■■□□□ 1.32
CACNB3-210ENST00000548874 CCDC169A6NNP5 214 aa23.26■■□□□ 1.31
CACNB3-210ENST00000548874 SLC16A4O15374 487 aa23.26■■□□□ 1.31
CACNB3-210ENST00000548874 MAPTP10636 758 aaKnown RBP23.26■■□□□ 1.31
CACNB3-210ENST00000548874 CSF2RAP15509 400 aa23.26■■□□□ 1.31
CACNB3-210ENST00000548874 PTMSP20962 102 aa23.26■■□□□ 1.31
CACNB3-210ENST00000548874 MBTD1Q05BQ5 628 aa23.26■■□□□ 1.31
CACNB3-210ENST00000548874 HERC4Q5GLZ8 1057 aaPredicted RBP23.26■■□□□ 1.31
CACNB3-210ENST00000548874 FAM228AQ86W67 206 aa23.26■■□□□ 1.31
CACNB3-210ENST00000548874 ZBTB8OSQ8IWT0 167 aa23.26■■□□□ 1.31
CACNB3-210ENST00000548874 FAM178BQ8IXR5 827 aa23.26■■□□□ 1.31
CACNB3-210ENST00000548874 ST6GALNAC4Q9H4F1 302 aa23.26■■□□□ 1.31
CACNB3-210ENST00000548874 SCN5AQ14524 2016 aa23.26■■□□□ 1.31
CACNB3-210ENST00000548874 RBAK-RBAKDNI3L0D1 243 aa23.25■■□□□ 1.31
CACNB3-210ENST00000548874 CSDE1O75534 798 aaKnown RBP23.25■■□□□ 1.31
CACNB3-210ENST00000548874 RPS6KA5O75582 802 aa23.25■■□□□ 1.31
CACNB3-210ENST00000548874 RPN1P04843 607 aaKnown RBP23.25■■□□□ 1.31
CACNB3-210ENST00000548874 EFNA5P52803 228 aa23.25■■□□□ 1.31
CACNB3-210ENST00000548874 KMT5BQ4FZB7 885 aa23.25■■□□□ 1.31
CACNB3-210ENST00000548874 PLEKHG4Q58EX7 1191 aa23.25■■□□□ 1.31
CACNB3-210ENST00000548874 SLC17A8Q8NDX2 589 aa23.25■■□□□ 1.31
CACNB3-210ENST00000548874 TMEM134Q9H6X4 195 aa23.25■■□□□ 1.31
CACNB3-210ENST00000548874 ERVK-5Q9HDB9 667 aa23.25■■□□□ 1.31
CACNB3-210ENST00000548874 H0YCG3 227 aa23.24■■□□□ 1.31
CACNB3-210ENST00000548874 SCP2P22307 547 aa23.24■■□□□ 1.31
CACNB3-210ENST00000548874 NMT1P30419 496 aaKnown RBP23.24■■□□□ 1.31
CACNB3-210ENST00000548874 CD52P31358 61 aa23.24■■□□□ 1.31
CACNB3-210ENST00000548874 KCNB1Q14721 858 aa23.24■■□□□ 1.31
CACNB3-210ENST00000548874 PCBP1Q15365 356 aaKnown RBP eCLIP23.24■■□□□ 1.31
CACNB3-210ENST00000548874 AMHR2Q16671 573 aa23.24■■□□□ 1.31
CACNB3-210ENST00000548874 FAM187BQ17R55 369 aa23.24■■□□□ 1.31
CACNB3-210ENST00000548874 PPP4R3CPQ6ZMV5 832 aa23.24■■□□□ 1.31
CACNB3-210ENST00000548874 TAS1R3Q7RTX0 852 aa23.24■■□□□ 1.31
CACNB3-210ENST00000548874 ZNF720Q7Z2F6 126 aa23.24■■□□□ 1.31
CACNB3-210ENST00000548874 HAUS6Q7Z4H7 955 aa23.24■■□□□ 1.31
CACNB3-210ENST00000548874 STRA6Q9BX79 667 aa23.24■■□□□ 1.31
CACNB3-210ENST00000548874 FZD8Q9H461 694 aa23.24■■□□□ 1.31
CACNB3-210ENST00000548874 PADI3Q9ULW8 664 aa23.24■■□□□ 1.31
CACNB3-210ENST00000548874 PCDHA5Q9Y5H7 936 aa23.24■■□□□ 1.31
CACNB3-210ENST00000548874 PHLPP2Q6ZVD8 1323 aa23.24■■□□□ 1.31
CACNB3-210ENST00000548874 INO80B-WBP1J3KQ70 363 aa23.23■■□□□ 1.31
CACNB3-210ENST00000548874 K7ENM7 598 aa23.23■■□□□ 1.31
CACNB3-210ENST00000548874 PPP1R37O75864 691 aa23.23■■□□□ 1.31
CACNB3-210ENST00000548874 RHOBTB3O94955 611 aa23.23■■□□□ 1.31
CACNB3-210ENST00000548874 SMC2O95347 1197 aa23.23■■□□□ 1.31
CACNB3-210ENST00000548874 PFKMP08237 780 aa23.23■■□□□ 1.31
CACNB3-210ENST00000548874 FGFR4P22455 802 aa23.23■■□□□ 1.31
CACNB3-210ENST00000548874 SFPQP23246 707 aaKnown RBP eCLIP23.23■■□□□ 1.31
CACNB3-210ENST00000548874 SARSP49591 514 aaKnown RBP23.23■■□□□ 1.31
CACNB3-210ENST00000548874 GTF2BQ00403 316 aa23.23■■□□□ 1.31
CACNB3-210ENST00000548874 FPGSQ05932 587 aa23.23■■□□□ 1.31
CACNB3-210ENST00000548874 PAK2Q13177 524 aa23.23■■□□□ 1.31
CACNB3-210ENST00000548874 PPIGQ13427 754 aaKnown RBP eCLIP23.23■■□□□ 1.31
CACNB3-210ENST00000548874 CAMK4Q16566 473 aa23.23■■□□□ 1.31
CACNB3-210ENST00000548874 FAM26FQ5R3K3 315 aa23.23■■□□□ 1.31
CACNB3-210ENST00000548874 NT5DC1Q5TFE4 455 aa23.23■■□□□ 1.31
CACNB3-210ENST00000548874 ERCC4Q92889 916 aaPredicted RBP23.23■■□□□ 1.31
CACNB3-210ENST00000548874 HPS3Q969F9 1004 aa23.23■■□□□ 1.31
CACNB3-210ENST00000548874 GSDMAQ96QA5 445 aa23.23■■□□□ 1.31
CACNB3-210ENST00000548874 FGFBP2Q9BYJ0 223 aa23.23■■□□□ 1.31
CACNB3-210ENST00000548874 IFIH1Q9BYX4 1025 aaKnown RBP23.23■■□□□ 1.31
CACNB3-210ENST00000548874 NUP62CLQ9H1M0 184 aa23.23■■□□□ 1.31
CACNB3-210ENST00000548874 MRPL44Q9H9J2 332 aaKnown RBP23.23■■□□□ 1.31
CACNB3-210ENST00000548874 IL23AQ9NPF7 189 aa23.23■■□□□ 1.31
CACNB3-210ENST00000548874 EXOC1Q9NV70 894 aa23.23■■□□□ 1.31
CACNB3-210ENST00000548874 TBC1D7Q9P0N9 293 aa23.23■■□□□ 1.31
CACNB3-210ENST00000548874 ST3GAL5Q9UNP4 418 aa23.23■■□□□ 1.31
CACNB3-210ENST00000548874 DENND3A2RUS2 1198 aa23.22■■□□□ 1.31
CACNB3-210ENST00000548874 GPR182O15218 404 aa23.22■■□□□ 1.31
CACNB3-210ENST00000548874 MLLT1Q03111 559 aaPredicted RBP23.22■■□□□ 1.31
CACNB3-210ENST00000548874 MAPK6Q16659 721 aa23.22■■□□□ 1.31
CACNB3-210ENST00000548874 FAM43BQ6ZT52 329 aaPredicted RBP23.22■■□□□ 1.31
CACNB3-210ENST00000548874 DEFB128Q7Z7B8 93 aa23.22■■□□□ 1.31
CACNB3-210ENST00000548874 RPUSD2Q8IZ73 545 aaKnown RBP23.22■■□□□ 1.31
CACNB3-210ENST00000548874 DBF4BQ8NFT6 615 aa23.22■■□□□ 1.31
CACNB3-210ENST00000548874 TET1Q8NFU7 2136 aa23.22■■□□□ 1.31
CACNB3-210ENST00000548874 SMARCE1Q969G3 411 aa23.22■■□□□ 1.31
CACNB3-210ENST00000548874 PRIMPOLQ96LW4 560 aa23.22■■□□□ 1.31
CACNB3-210ENST00000548874 LBHD1Q9BQE6 289 aaPredicted RBP23.22■■□□□ 1.31
CACNB3-210ENST00000548874 PRMT7Q9NVM4 692 aaPredicted RBP23.22■■□□□ 1.31
CACNB3-210ENST00000548874 K7ERI5 159 aa23.21■■□□□ 1.31
CACNB3-210ENST00000548874 PRKCBP05771 671 aa23.21■■□□□ 1.31
CACNB3-210ENST00000548874 ABCD1P33897 745 aa23.21■■□□□ 1.31
CACNB3-210ENST00000548874 CASP5P51878 434 aa23.21■■□□□ 1.31
CACNB3-210ENST00000548874 PSMD2Q13200 908 aa23.21■■□□□ 1.31
CACNB3-210ENST00000548874 NFKBIBQ15653 356 aa23.21■■□□□ 1.31
CACNB3-210ENST00000548874 TCTN1Q2MV58 587 aa23.21■■□□□ 1.31
CACNB3-210ENST00000548874 C16orf59Q7L2K0 433 aa23.21■■□□□ 1.31
CACNB3-210ENST00000548874 CATSPER4Q7RTX7 472 aa23.21■■□□□ 1.31
CACNB3-210ENST00000548874 SEPT8Q92599 483 aa23.21■■□□□ 1.31
CACNB3-210ENST00000548874 APBB2Q92870 758 aa23.21■■□□□ 1.31
CACNB3-210ENST00000548874 CCDC47Q96A33 483 aaKnown RBP23.21■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms