RNA–Protein interactions for RNA: ENST00000548645.5

NPAS3-206, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,926 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-206ENST00000548645 O00370 1275 aa24.91■■□□□ 1.58
NPAS3-206ENST00000548645 DIAPH2O60879 1101 aa24.91■■□□□ 1.58
NPAS3-206ENST00000548645 TBCAO75347 108 aaKnown RBP24.91■■□□□ 1.58
NPAS3-206ENST00000548645 RPA1P27694 616 aa24.91■■□□□ 1.58
NPAS3-206ENST00000548645 PCDHA3Q9Y5H8 950 aa24.91■■□□□ 1.58
NPAS3-206ENST00000548645 ARFGEF1Q9Y6D6 1849 aa24.91■■□□□ 1.58
NPAS3-206ENST00000548645 CDK5RAP2Q96SN8 1893 aa24.91■■□□□ 1.58
NPAS3-206ENST00000548645 DDB1Q16531 1140 aa24.91■■□□□ 1.58
NPAS3-206ENST00000548645 C11orf63Q6NUN7 778 aa24.91■■□□□ 1.58
NPAS3-206ENST00000548645 AADACL2Q6P093 401 aa24.91■■□□□ 1.58
NPAS3-206ENST00000548645 ARL2BPQ9Y2Y0 163 aa24.91■■□□□ 1.58
NPAS3-206ENST00000548645 FMO5P49326 533 aa24.9■■□□□ 1.58
NPAS3-206ENST00000548645 TTBK2Q6IQ55 1244 aa24.9■■□□□ 1.58
NPAS3-206ENST00000548645 MBOAT7Q96N66 472 aa24.9■■□□□ 1.58
NPAS3-206ENST00000548645 CDCA7Q9BWT1 371 aaPredicted RBP24.9■■□□□ 1.58
NPAS3-206ENST00000548645 MYO3BQ8WXR4 1341 aa24.9■■□□□ 1.58
NPAS3-206ENST00000548645 ALAS1P13196 640 aa24.9■■□□□ 1.58
NPAS3-206ENST00000548645 SEL1L2Q5TEA6 688 aa24.9■■□□□ 1.58
NPAS3-206ENST00000548645 TTC27Q6P3X3 843 aa24.9■■□□□ 1.58
NPAS3-206ENST00000548645 TRMT10CQ7L0Y3 403 aaKnown RBP24.9■■□□□ 1.58
NPAS3-206ENST00000548645 ART4Q93070 314 aa24.9■■□□□ 1.58
NPAS3-206ENST00000548645 ARHGEF3Q9NR81 526 aa24.9■■□□□ 1.58
NPAS3-206ENST00000548645 TAS2R14Q9NYV8 317 aa24.9■■□□□ 1.58
NPAS3-206ENST00000548645 USP17L15C9J2P7 530 aa24.89■■□□□ 1.58
NPAS3-206ENST00000548645 USP17L13C9JLJ4 530 aa24.89■■□□□ 1.58
NPAS3-206ENST00000548645 USP17L11C9JVI0 530 aa24.89■■□□□ 1.58
NPAS3-206ENST00000548645 USP17L18D6R9N7 530 aa24.89■■□□□ 1.58
NPAS3-206ENST00000548645 USP17L22D6RA61 530 aa24.89■■□□□ 1.58
NPAS3-206ENST00000548645 USP17L17D6RBQ6 530 aa24.89■■□□□ 1.58
NPAS3-206ENST00000548645 USP17L19D6RCP7 530 aa24.89■■□□□ 1.58
NPAS3-206ENST00000548645 USP17L20D6RJB6 530 aa24.89■■□□□ 1.58
NPAS3-206ENST00000548645 TTLL1O95922 423 aa24.89■■□□□ 1.58
NPAS3-206ENST00000548645 TM4SF1P30408 202 aa24.89■■□□□ 1.58
NPAS3-206ENST00000548645 RHBDL3P58872 404 aa24.89■■□□□ 1.58
NPAS3-206ENST00000548645 SPIRE1Q08AE8 756 aa24.89■■□□□ 1.58
NPAS3-206ENST00000548645 USP17L24Q0WX57 530 aa24.89■■□□□ 1.58
NPAS3-206ENST00000548645 LRRC14Q15048 493 aa24.89■■□□□ 1.58
NPAS3-206ENST00000548645 GPATCH4Q5T3I0 446 aaKnown RBP24.89■■□□□ 1.58
NPAS3-206ENST00000548645 NUGGCQ68CJ6 796 aa24.89■■□□□ 1.58
NPAS3-206ENST00000548645 USP17L6PQ6QN14 398 aa24.89■■□□□ 1.58
NPAS3-206ENST00000548645 CYFIP1Q7L576 1253 aa24.89■■□□□ 1.58
NPAS3-206ENST00000548645 CCDC24Q8N4L8 307 aa24.89■■□□□ 1.58
NPAS3-206ENST00000548645 MGARPQ8TDB4 240 aa24.89■■□□□ 1.58
NPAS3-206ENST00000548645 ZNF570Q96NI8 536 aa24.89■■□□□ 1.58
NPAS3-206ENST00000548645 ANO3Q9BYT9 981 aa24.89■■□□□ 1.58
NPAS3-206ENST00000548645 STK24Q9Y6E0 443 aa24.89■■□□□ 1.58
NPAS3-206ENST00000548645 RSPH10B2B2RC85 870 aa24.89■■□□□ 1.57
NPAS3-206ENST00000548645 USP17L10C9JJH3 530 aa24.89■■□□□ 1.57
NPAS3-206ENST00000548645 RSPH10BP0C881 870 aa24.89■■□□□ 1.57
NPAS3-206ENST00000548645 SPATA31C1P0DKV0 1188 aa24.89■■□□□ 1.57
NPAS3-206ENST00000548645 ATP5DP30049 168 aa24.89■■□□□ 1.57
NPAS3-206ENST00000548645 MOXD1Q6UVY6 613 aa24.89■■□□□ 1.57
NPAS3-206ENST00000548645 ARHGEF2Q92974 986 aaKnown RBP24.89■■□□□ 1.57
NPAS3-206ENST00000548645 ZSWIM1Q9BR11 485 aa24.89■■□□□ 1.57
NPAS3-206ENST00000548645 CTTNBP2NLQ9P2B4 639 aa24.89■■□□□ 1.57
NPAS3-206ENST00000548645 RTCBQ9Y3I0 505 aaKnown RBP24.89■■□□□ 1.57
NPAS3-206ENST00000548645 PFASO15067 1338 aa24.89■■□□□ 1.57
NPAS3-206ENST00000548645 FRMPD4Q14CM0 1322 aa24.89■■□□□ 1.57
NPAS3-206ENST00000548645 GJB6O95452 261 aa24.89■■□□□ 1.57
NPAS3-206ENST00000548645 KRT16P08779 473 aa24.89■■□□□ 1.57
NPAS3-206ENST00000548645 LACTBP83111 547 aaPredicted RBP24.89■■□□□ 1.57
NPAS3-206ENST00000548645 TPTE2Q6XPS3 522 aa24.89■■□□□ 1.57
NPAS3-206ENST00000548645 CCDC105Q8IYK2 499 aa24.89■■□□□ 1.57
NPAS3-206ENST00000548645 SPDL1Q96EA4 605 aa24.89■■□□□ 1.57
NPAS3-206ENST00000548645 GPR88Q9GZN0 384 aa24.89■■□□□ 1.57
NPAS3-206ENST00000548645 TNRC6CQ9HCJ0 1690 aaKnown RBP24.89■■□□□ 1.57
NPAS3-206ENST00000548645 PASKQ96RG2 1323 aa24.88■■□□□ 1.57
NPAS3-206ENST00000548645 IGKV6D-41A0A0C4DH26 115 aa24.88■■□□□ 1.57
NPAS3-206ENST00000548645 TMEM120BA0PK00 339 aa24.88■■□□□ 1.57
NPAS3-206ENST00000548645 KIF3CO14782 793 aa24.88■■□□□ 1.57
NPAS3-206ENST00000548645 TGFB1I1O43294 461 aa24.88■■□□□ 1.57
NPAS3-206ENST00000548645 AKR1B1P15121 316 aa24.88■■□□□ 1.57
NPAS3-206ENST00000548645 SLC16A2P36021 539 aa24.88■■□□□ 1.57
NPAS3-206ENST00000548645 MSH2P43246 934 aa24.88■■□□□ 1.57
NPAS3-206ENST00000548645 KCNA1Q09470 495 aa24.88■■□□□ 1.57
NPAS3-206ENST00000548645 SPATA21Q7Z572 469 aa24.88■■□□□ 1.57
NPAS3-206ENST00000548645 PRCCQ92733 491 aaPredicted RBP24.88■■□□□ 1.57
NPAS3-206ENST00000548645 KRT35Q92764 455 aa24.88■■□□□ 1.57
NPAS3-206ENST00000548645 RXFP1Q9HBX9 757 aa24.88■■□□□ 1.57
NPAS3-206ENST00000548645 MTUS1Q9ULD2 1270 aa24.88■■□□□ 1.57
NPAS3-206ENST00000548645 UBAP1LF5GYI3 381 aa24.88■■□□□ 1.57
NPAS3-206ENST00000548645 SKAP2O75563 359 aaPredicted RBP24.88■■□□□ 1.57
NPAS3-206ENST00000548645 DPP8Q6V1X1 898 aaPredicted RBP24.88■■□□□ 1.57
NPAS3-206ENST00000548645 CCDC25Q86WR0 208 aa24.88■■□□□ 1.57
NPAS3-206ENST00000548645 CNKSR1Q969H4 720 aa24.88■■□□□ 1.57
NPAS3-206ENST00000548645 SERPINB12Q96P63 405 aa24.88■■□□□ 1.57
NPAS3-206ENST00000548645 MKNK1Q9BUB5 465 aa24.88■■□□□ 1.57
NPAS3-206ENST00000548645 SLC5A4Q9NY91 659 aa24.88■■□□□ 1.57
NPAS3-206ENST00000548645 COL14A1Q05707 1796 aaKnown RBP24.88■■□□□ 1.57
NPAS3-206ENST00000548645 ATP11AP98196 1134 aa24.87■■□□□ 1.57
NPAS3-206ENST00000548645 CLEC10AQ8IUN9 316 aa24.87■■□□□ 1.57
NPAS3-206ENST00000548645 SLF2Q8IX21 1173 aa24.87■■□□□ 1.57
NPAS3-206ENST00000548645 OLFML3Q9NRN5 406 aa24.87■■□□□ 1.57
NPAS3-206ENST00000548645 APEX2Q9UBZ4 518 aa24.87■■□□□ 1.57
NPAS3-206ENST00000548645 SPATA31A1Q5TZJ5 1347 aa24.87■■□□□ 1.57
NPAS3-206ENST00000548645 GAP43P17677 238 aa24.87■■□□□ 1.57
NPAS3-206ENST00000548645 CALCOCO2Q13137 446 aa24.87■■□□□ 1.57
NPAS3-206ENST00000548645 KIF2BQ8N4N8 673 aa24.87■■□□□ 1.57
NPAS3-206ENST00000548645 ETNPPLQ8TBG4 499 aa24.87■■□□□ 1.57
NPAS3-206ENST00000548645 RPS6KC1Q96S38 1066 aa24.87■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms