RNA–Protein interactions for RNA: ENST00000548311.5

TROAP-207, Transcript of trophinin associated protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TROAP, Length 623 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-207ENST00000548311 COL9A1P20849 921 aa17.06■□□□□ 0.32
TROAP-207ENST00000548311 KRT17Q04695 432 aa17.06■□□□□ 0.32
TROAP-207ENST00000548311 SMAD4Q13485 552 aaKnown RBP17.06■□□□□ 0.32
TROAP-207ENST00000548311 SRGAP1Q7Z6B7 1085 aa17.06■□□□□ 0.32
TROAP-207ENST00000548311 RNF149Q8NC42 400 aa17.06■□□□□ 0.32
TROAP-207ENST00000548311 MRPS27Q92552 414 aaKnown RBP17.06■□□□□ 0.32
TROAP-207ENST00000548311 ZSCAN31Q96LW9 406 aaPredicted RBP17.06■□□□□ 0.32
TROAP-207ENST00000548311 TCF25Q9BQ70 676 aa17.06■□□□□ 0.32
TROAP-207ENST00000548311 TMEM60Q9H2L4 133 aa17.06■□□□□ 0.32
TROAP-207ENST00000548311 FAM105AQ9NUU6 356 aa17.06■□□□□ 0.32
TROAP-207ENST00000548311 SPG21Q9NZD8 308 aa17.06■□□□□ 0.32
TROAP-207ENST00000548311 BARX2Q9UMQ3 279 aaPredicted RBP17.06■□□□□ 0.32
TROAP-207ENST00000548311 A0A087WWV3 80 aa17.05■□□□□ 0.32
TROAP-207ENST00000548311 POTEMA6NI47 508 aa17.05■□□□□ 0.32
TROAP-207ENST00000548311 MBTPS2O43462 519 aa17.05■□□□□ 0.32
TROAP-207ENST00000548311 ZC3H11AO75152 810 aaKnown RBP eCLIP17.05■□□□□ 0.32
TROAP-207ENST00000548311 CA8P35219 290 aa17.05■□□□□ 0.32
TROAP-207ENST00000548311 RAB27AP51159 221 aa17.05■□□□□ 0.32
TROAP-207ENST00000548311 HMGN5P82970 282 aaKnown RBP17.05■□□□□ 0.32
TROAP-207ENST00000548311 PLCB3Q01970 1234 aa17.05■□□□□ 0.32
TROAP-207ENST00000548311 GLB1LQ6UWU2 654 aa17.05■□□□□ 0.32
TROAP-207ENST00000548311 FERMT3Q86UX7 667 aa17.05■□□□□ 0.32
TROAP-207ENST00000548311 MTMR9Q96QG7 549 aa17.05■□□□□ 0.32
TROAP-207ENST00000548311 HSD17B14Q9BPX1 270 aa17.05■□□□□ 0.32
TROAP-207ENST00000548311 MINDY3Q9H8M7 445 aa17.05■□□□□ 0.32
TROAP-207ENST00000548311 SH2B1Q9NRF2 756 aaPredicted RBP17.05■□□□□ 0.32
TROAP-207ENST00000548311 AGPAT5Q9NUQ2 364 aa17.05■□□□□ 0.32
TROAP-207ENST00000548311 LZTS1Q9Y250 596 aa17.05■□□□□ 0.32
TROAP-207ENST00000548311 MEIS3P2A8K0S8 358 aa17.04■□□□□ 0.32
TROAP-207ENST00000548311 NT5C1B-RDH14C9J2C7 533 aa17.04■□□□□ 0.32
TROAP-207ENST00000548311 FSCN2O14926 492 aa17.04■□□□□ 0.32
TROAP-207ENST00000548311 ASAP2O43150 1006 aa17.04■□□□□ 0.32
TROAP-207ENST00000548311 ERLIN2O94905 339 aa17.04■□□□□ 0.32
TROAP-207ENST00000548311 GLP2RO95838 553 aa17.04■□□□□ 0.32
TROAP-207ENST00000548311 ALDH7A1P49419 539 aaKnown RBP17.04■□□□□ 0.32
TROAP-207ENST00000548311 BCAR1P56945 870 aa17.04■□□□□ 0.32
TROAP-207ENST00000548311 RNASELQ05823 741 aaKnown RBP17.04■□□□□ 0.32
TROAP-207ENST00000548311 ZP2Q05996 745 aa17.04■□□□□ 0.32
TROAP-207ENST00000548311 ZNF174Q15697 407 aa17.04■□□□□ 0.32
TROAP-207ENST00000548311 SMAD2Q15796 467 aaKnown RBP17.04■□□□□ 0.32
TROAP-207ENST00000548311 PDE12Q6L8Q7 609 aaKnown RBP17.04■□□□□ 0.32
TROAP-207ENST00000548311 TMC7Q7Z402 723 aa17.04■□□□□ 0.32
TROAP-207ENST00000548311 ADHFE1Q8IWW8 467 aa17.04■□□□□ 0.32
TROAP-207ENST00000548311 PIGOQ8TEQ8 1089 aa17.04■□□□□ 0.32
TROAP-207ENST00000548311 KIF2CQ99661 725 aa17.04■□□□□ 0.32
TROAP-207ENST00000548311 TRAIPQ9BWF2 469 aa17.04■□□□□ 0.32
TROAP-207ENST00000548311 GBP3Q9H0R5 595 aa17.04■□□□□ 0.32
TROAP-207ENST00000548311 XPNPEP1Q9NQW7 623 aa17.04■□□□□ 0.32
TROAP-207ENST00000548311 ANKEF1Q9NU02 776 aa17.04■□□□□ 0.32
TROAP-207ENST00000548311 CLEC1BQ9P126 229 aa17.04■□□□□ 0.32
TROAP-207ENST00000548311 PRKAG3Q9UGI9 489 aa17.04■□□□□ 0.32
TROAP-207ENST00000548311 PCDHB2Q9Y5E7 798 aa17.04■□□□□ 0.32
TROAP-207ENST00000548311 FAM86C2PA6NEL3 165 aa17.03■□□□□ 0.32
TROAP-207ENST00000548311 USO1O60763 962 aaKnown RBP17.03■□□□□ 0.32
TROAP-207ENST00000548311 DGAT1O75907 488 aa17.03■□□□□ 0.32
TROAP-207ENST00000548311 LYPLA2O95372 231 aa17.03■□□□□ 0.32
TROAP-207ENST00000548311 RBM10P98175 930 aaKnown RBP17.03■□□□□ 0.32
TROAP-207ENST00000548311 TFDP1Q14186 410 aa17.03■□□□□ 0.32
TROAP-207ENST00000548311 MXD4Q14582 209 aaPredicted RBP17.03■□□□□ 0.32
TROAP-207ENST00000548311 DUSP6Q16828 381 aa17.03■□□□□ 0.32
TROAP-207ENST00000548311 NOMO2Q5JPE7 1267 aa17.03■□□□□ 0.32
TROAP-207ENST00000548311 LLGL2Q6P1M3 1020 aa17.03■□□□□ 0.32
TROAP-207ENST00000548311 SLC39A11Q8N1S5 342 aa17.03■□□□□ 0.32
TROAP-207ENST00000548311 PGBD4Q96DM1 585 aa17.03■□□□□ 0.32
TROAP-207ENST00000548311 TMEM169Q96HH4 297 aa17.03■□□□□ 0.32
TROAP-207ENST00000548311 MSLNLQ96KJ4 702 aa17.03■□□□□ 0.32
TROAP-207ENST00000548311 CDCA3Q99618 268 aaPredicted RBP17.03■□□□□ 0.32
TROAP-207ENST00000548311 FOXP1Q9H334 677 aaPredicted RBP17.03■□□□□ 0.32
TROAP-207ENST00000548311 NGRNQ9NPE2 291 aaKnown RBP17.03■□□□□ 0.32
TROAP-207ENST00000548311 RAPGEFL1Q9UHV5 662 aa17.03■□□□□ 0.32
TROAP-207ENST00000548311 HIDE1A8MVS5 230 aa17.02■□□□□ 0.32
TROAP-207ENST00000548311 INO80B-WBP1J3KQ70 363 aa17.02■□□□□ 0.32
TROAP-207ENST00000548311 OR52Z1P0C646 297 aa17.02■□□□□ 0.32
TROAP-207ENST00000548311 TECP42680 631 aa17.02■□□□□ 0.32
TROAP-207ENST00000548311 RBM25P49756 843 aaKnown RBP17.02■□□□□ 0.32
TROAP-207ENST00000548311 RARRES1P49788 294 aa17.02■□□□□ 0.32
TROAP-207ENST00000548311 TMEM31Q5JXX7 168 aa17.02■□□□□ 0.32
TROAP-207ENST00000548311 TTC38Q5R3I4 469 aa17.02■□□□□ 0.32
TROAP-207ENST00000548311 MAEAQ7L5Y9 396 aa17.02■□□□□ 0.32
TROAP-207ENST00000548311 FBXO18Q8NFZ0 1043 aa17.02■□□□□ 0.32
TROAP-207ENST00000548311 VN1R2Q8NFZ6 395 aa17.02■□□□□ 0.32
TROAP-207ENST00000548311 URGCPQ8TCY9 931 aa17.02■□□□□ 0.32
TROAP-207ENST00000548311 ASAP3Q8TDY4 903 aa17.02■□□□□ 0.32
TROAP-207ENST00000548311 POP1Q99575 1024 aaKnown RBP17.02■□□□□ 0.32
TROAP-207ENST00000548311 POLR3FQ9H1D9 316 aaPredicted RBP17.02■□□□□ 0.32
TROAP-207ENST00000548311 TBC1D13Q9NVG8 400 aa17.02■□□□□ 0.32
TROAP-207ENST00000548311 FSD2A1L4K1 749 aa17.01■□□□□ 0.31
TROAP-207ENST00000548311 PI4K2BG5E9Z4 385 aa17.01■□□□□ 0.31
TROAP-207ENST00000548311 ZNF623O75123 536 aa17.01■□□□□ 0.31
TROAP-207ENST00000548311 OFD1O75665 1012 aa17.01■□□□□ 0.31
TROAP-207ENST00000548311 SRGAP2BP0DMP2 458 aa17.01■□□□□ 0.31
TROAP-207ENST00000548311 HOXA11P31270 313 aaPredicted RBP17.01■□□□□ 0.31
TROAP-207ENST00000548311 PTENP60484 403 aa17.01■□□□□ 0.31
TROAP-207ENST00000548311 NCBP1Q09161 790 aaKnown RBP17.01■□□□□ 0.31
TROAP-207ENST00000548311 COASYQ13057 564 aa17.01■□□□□ 0.31
TROAP-207ENST00000548311 SMC1AQ14683 1233 aaKnown RBP17.01■□□□□ 0.31
TROAP-207ENST00000548311 NOSTRINQ8IVI9 506 aa17.01■□□□□ 0.31
TROAP-207ENST00000548311 SMRP1Q8NCR6 262 aa17.01■□□□□ 0.31
TROAP-207ENST00000548311 ERMNQ8TAM6 284 aa17.01■□□□□ 0.31
TROAP-207ENST00000548311 RSPH1Q8WYR4 309 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms