RNA–Protein interactions for RNA: ENST00000548277.1

TRAFD1-205, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-205ENST00000548277 NOMO2Q5JPE7 1267 aa13.43□□□□□ -0.26
TRAFD1-205ENST00000548277 GLB1LQ6UWU2 654 aa13.43□□□□□ -0.26
TRAFD1-205ENST00000548277 DENND4AQ7Z401 1863 aa13.43□□□□□ -0.26
TRAFD1-205ENST00000548277 DDX53Q86TM3 631 aaKnown RBP13.43□□□□□ -0.26
TRAFD1-205ENST00000548277 CABP7Q86V35 215 aa13.43□□□□□ -0.26
TRAFD1-205ENST00000548277 SLC22A17Q8WUG5 538 aa13.43□□□□□ -0.26
TRAFD1-205ENST00000548277 RNF26Q9BY78 433 aaPredicted RBP13.43□□□□□ -0.26
TRAFD1-205ENST00000548277 NIFKQ9BYG3 293 aaKnown RBP13.43□□□□□ -0.26
TRAFD1-205ENST00000548277 IRF2BPLQ9H1B7 796 aa13.43□□□□□ -0.26
TRAFD1-205ENST00000548277 SLKQ9H2G2 1235 aaPredicted RBP13.43□□□□□ -0.26
TRAFD1-205ENST00000548277 CHST12Q9NRB3 414 aa13.43□□□□□ -0.26
TRAFD1-205ENST00000548277 FAM105AQ9NUU6 356 aa13.43□□□□□ -0.26
TRAFD1-205ENST00000548277 PTPRZ1P23471 2315 aaPredicted RBP13.42□□□□□ -0.26
TRAFD1-205ENST00000548277 C2CD2LO14523 706 aa13.42□□□□□ -0.26
TRAFD1-205ENST00000548277 B4GALT3O60512 393 aa13.42□□□□□ -0.26
TRAFD1-205ENST00000548277 DTNBO60941 627 aa13.42□□□□□ -0.26
TRAFD1-205ENST00000548277 SRGAP2CP0DJJ0 459 aa13.42□□□□□ -0.26
TRAFD1-205ENST00000548277 CTSAP10619 480 aa13.42□□□□□ -0.26
TRAFD1-205ENST00000548277 RPS6KB1P23443 525 aa13.42□□□□□ -0.26
TRAFD1-205ENST00000548277 PDIA3P30101 505 aaKnown RBP13.42□□□□□ -0.26
TRAFD1-205ENST00000548277 AFF1P51825 1210 aaKnown RBP13.42□□□□□ -0.26
TRAFD1-205ENST00000548277 NPEPPSP55786 919 aa13.42□□□□□ -0.26
TRAFD1-205ENST00000548277 SSRP1Q08945 709 aaKnown RBP13.42□□□□□ -0.26
TRAFD1-205ENST00000548277 STK3Q13188 491 aa13.42□□□□□ -0.26
TRAFD1-205ENST00000548277 KIAA1841Q6NSI8 718 aa13.42□□□□□ -0.26
TRAFD1-205ENST00000548277 ASCL5Q7RTU5 278 aa13.42□□□□□ -0.26
TRAFD1-205ENST00000548277 UBALD2Q8IYN6 164 aa13.42□□□□□ -0.26
TRAFD1-205ENST00000548277 ZNF710Q8N1W2 664 aa13.42□□□□□ -0.26
TRAFD1-205ENST00000548277 SNX27Q96L92 541 aa13.42□□□□□ -0.26
TRAFD1-205ENST00000548277 CEP89Q96ST8 783 aa13.42□□□□□ -0.26
TRAFD1-205ENST00000548277 INO80BQ9C086 356 aaPredicted RBP13.42□□□□□ -0.26
TRAFD1-205ENST00000548277 STK25O00506 426 aa13.41□□□□□ -0.26
TRAFD1-205ENST00000548277 DDHD2O94830 711 aa13.41□□□□□ -0.26
TRAFD1-205ENST00000548277 POMCP01189 267 aa13.41□□□□□ -0.26
TRAFD1-205ENST00000548277 SKIP12755 728 aa13.41□□□□□ -0.26
TRAFD1-205ENST00000548277 IFNAR1P17181 557 aa13.41□□□□□ -0.26
TRAFD1-205ENST00000548277 HSPA4P34932 840 aa13.41□□□□□ -0.26
TRAFD1-205ENST00000548277 Q4G0T1 1027 aa13.41□□□□□ -0.26
TRAFD1-205ENST00000548277 PLCD3Q8N3E9 789 aa13.41□□□□□ -0.26
TRAFD1-205ENST00000548277 ZNF579Q8NAF0 562 aaKnown RBP13.41□□□□□ -0.26
TRAFD1-205ENST00000548277 AIFM3Q96NN9 605 aa13.41□□□□□ -0.26
TRAFD1-205ENST00000548277 KLHL5Q96PQ7 755 aa13.41□□□□□ -0.26
TRAFD1-205ENST00000548277 FAM193BQ96PV7 902 aaPredicted RBP13.41□□□□□ -0.26
TRAFD1-205ENST00000548277 VN1R3Q9BXE9 311 aa13.41□□□□□ -0.26
TRAFD1-205ENST00000548277 CYP26B1Q9NR63 512 aa13.41□□□□□ -0.26
TRAFD1-205ENST00000548277 DZANK1Q9NVP4 752 aa13.41□□□□□ -0.26
TRAFD1-205ENST00000548277 PCDHA4Q9UN74 947 aa13.41□□□□□ -0.26
TRAFD1-205ENST00000548277 FAN1Q9Y2M0 1017 aa13.41□□□□□ -0.26
TRAFD1-205ENST00000548277 PCDHB2Q9Y5E7 798 aa13.41□□□□□ -0.26
TRAFD1-205ENST00000548277 USP34Q70CQ2 3546 aa13.4□□□□□ -0.26
TRAFD1-205ENST00000548277 IGKV6-21A0A0C4DH24 114 aa13.4□□□□□ -0.26
TRAFD1-205ENST00000548277 EML1O00423 815 aa13.4□□□□□ -0.26
TRAFD1-205ENST00000548277 PI15O43692 258 aa13.4□□□□□ -0.26
TRAFD1-205ENST00000548277 MAFO75444 373 aaPredicted RBP13.4□□□□□ -0.26
TRAFD1-205ENST00000548277 ALDH2P05091 517 aa13.4□□□□□ -0.26
TRAFD1-205ENST00000548277 POLGP54098 1239 aaPredicted RBP13.4□□□□□ -0.26
TRAFD1-205ENST00000548277 CDC42EP1Q00587 391 aa13.4□□□□□ -0.26
TRAFD1-205ENST00000548277 INF2Q27J81 1249 aa13.4□□□□□ -0.26
TRAFD1-205ENST00000548277 LETM2Q2VYF4 491 aa13.4□□□□□ -0.26
TRAFD1-205ENST00000548277 ASTLQ6HA08 431 aaPredicted RBP13.4□□□□□ -0.26
TRAFD1-205ENST00000548277 AGMOQ6ZNB7 445 aa13.4□□□□□ -0.26
TRAFD1-205ENST00000548277 ANO5Q75V66 913 aa13.4□□□□□ -0.26
TRAFD1-205ENST00000548277 ZNF410Q86VK4 478 aa13.4□□□□□ -0.26
TRAFD1-205ENST00000548277 TRIM22Q8IYM9 498 aa13.4□□□□□ -0.26
TRAFD1-205ENST00000548277 ZDHHC14Q8IZN3 488 aa13.4□□□□□ -0.26
TRAFD1-205ENST00000548277 BLIDQ8IZY5 108 aa13.4□□□□□ -0.26
TRAFD1-205ENST00000548277 URGCPQ8TCY9 931 aa13.4□□□□□ -0.26
TRAFD1-205ENST00000548277 KCNB2Q92953 911 aa13.4□□□□□ -0.26
TRAFD1-205ENST00000548277 TMEM143Q96AN5 459 aa13.4□□□□□ -0.26
TRAFD1-205ENST00000548277 PGBD4Q96DM1 585 aa13.4□□□□□ -0.26
TRAFD1-205ENST00000548277 ARID2Q68CP9 1835 aa13.4□□□□□ -0.26
TRAFD1-205ENST00000548277 NRP1O14786 923 aa13.39□□□□□ -0.27
TRAFD1-205ENST00000548277 SLC37A4O43826 429 aa13.39□□□□□ -0.27
TRAFD1-205ENST00000548277 CNPP09543 421 aaKnown RBP13.39□□□□□ -0.27
TRAFD1-205ENST00000548277 SPATA31D3P0C874 917 aa13.39□□□□□ -0.27
TRAFD1-205ENST00000548277 PSMA5P28066 241 aa13.39□□□□□ -0.27
TRAFD1-205ENST00000548277 AK2P54819 239 aa13.39□□□□□ -0.27
TRAFD1-205ENST00000548277 PSMC5P62195 406 aa13.39□□□□□ -0.27
TRAFD1-205ENST00000548277 GIT2Q14161 759 aa13.39□□□□□ -0.27
TRAFD1-205ENST00000548277 PTPN14Q15678 1187 aa13.39□□□□□ -0.27
TRAFD1-205ENST00000548277 SPATA31D4Q6ZUB0 917 aa13.39□□□□□ -0.27
TRAFD1-205ENST00000548277 TAS1R1Q7RTX1 841 aa13.39□□□□□ -0.27
TRAFD1-205ENST00000548277 FRMD5Q7Z6J6 570 aa13.39□□□□□ -0.27
TRAFD1-205ENST00000548277 GPR149Q86SP6 731 aa13.39□□□□□ -0.27
TRAFD1-205ENST00000548277 ST13P5Q8NFI4 369 aaPredicted RBP13.39□□□□□ -0.27
TRAFD1-205ENST00000548277 RDM1Q8NG50 284 aa13.39□□□□□ -0.27
TRAFD1-205ENST00000548277 ACSF2Q96CM8 615 aaPredicted RBP13.39□□□□□ -0.27
TRAFD1-205ENST00000548277 CEP170P1Q96L14 293 aa13.39□□□□□ -0.27
TRAFD1-205ENST00000548277 EMILIN2Q9BXX0 1053 aa13.39□□□□□ -0.27
TRAFD1-205ENST00000548277 MINDY3Q9H8M7 445 aa13.39□□□□□ -0.27
TRAFD1-205ENST00000548277 IFT122Q9HBG6 1241 aa13.39□□□□□ -0.27
TRAFD1-205ENST00000548277 SH3GLB2Q9NR46 395 aa13.39□□□□□ -0.27
TRAFD1-205ENST00000548277 DDX25Q9UHL0 483 aaKnown RBP13.39□□□□□ -0.27
TRAFD1-205ENST00000548277 FBXL21Q9UKT6 434 aa13.39□□□□□ -0.27
TRAFD1-205ENST00000548277 KCNJ14Q9UNX9 436 aa13.39□□□□□ -0.27
TRAFD1-205ENST00000548277 COL4A3BPQ9Y5P4 624 aa13.39□□□□□ -0.27
TRAFD1-205ENST00000548277 IRAK3Q9Y616 596 aa13.39□□□□□ -0.27
TRAFD1-205ENST00000548277 DOCK8Q8NF50 2099 aa13.39□□□□□ -0.27
TRAFD1-205ENST00000548277 CACNA1HO95180 2353 aa13.38□□□□□ -0.27
TRAFD1-205ENST00000548277 NID2Q14112 1375 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms