RNA–Protein interactions for RNA: ENST00000547691.6

CEP290-203, Transcript of centrosomal protein 290, humanhuman

TSL 1 (best) BASIC

Gene CEP290, Length 5,968 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290-203ENST00000547691 RAD9AQ99638 391 aa0.47□□□□□ -2.33
CEP290-203ENST00000547691 USP26Q9BXU7 913 aa0.47□□□□□ -2.33
CEP290-203ENST00000547691 SENP6Q9GZR1 1112 aaPredicted RBP0.47□□□□□ -2.33
CEP290-203ENST00000547691 EHD4Q9H223 541 aa0.47□□□□□ -2.33
CEP290-203ENST00000547691 GGNBP2Q9H3C7 697 aa0.47□□□□□ -2.33
CEP290-203ENST00000547691 CLMPQ9H6B4 373 aa0.47□□□□□ -2.33
CEP290-203ENST00000547691 MVB12BQ9H7P6 319 aa0.47□□□□□ -2.33
CEP290-203ENST00000547691 SLC28A3Q9HAS3 691 aa0.47□□□□□ -2.33
CEP290-203ENST00000547691 EVLQ9UI08 416 aaPredicted RBP0.47□□□□□ -2.33
CEP290-203ENST00000547691 FAN1Q9Y2M0 1017 aa0.47□□□□□ -2.33
CEP290-203ENST00000547691 DYNC1LI1Q9Y6G9 523 aaKnown RBP0.47□□□□□ -2.33
CEP290-203ENST00000547691 WIPF3A6NGB9 483 aa0.47□□□□□ -2.33
CEP290-203ENST00000547691 F5H6K3 240 aa0.47□□□□□ -2.33
CEP290-203ENST00000547691 J3QKU1 62 aa0.47□□□□□ -2.33
CEP290-203ENST00000547691 HAS3O00219 553 aa0.47□□□□□ -2.33
CEP290-203ENST00000547691 SEMA3EO15041 775 aa0.47□□□□□ -2.33
CEP290-203ENST00000547691 TLR3O15455 904 aaKnown RBP0.47□□□□□ -2.33
CEP290-203ENST00000547691 ADCY6O43306 1168 aa0.47□□□□□ -2.33
CEP290-203ENST00000547691 MYO1BO43795 1136 aa0.47□□□□□ -2.33
CEP290-203ENST00000547691 SHOX2O60902 331 aaPredicted RBP0.47□□□□□ -2.33
CEP290-203ENST00000547691 TECTAO75443 2155 aa0.47□□□□□ -2.33
CEP290-203ENST00000547691 UFL1O94874 794 aa0.47□□□□□ -2.33
CEP290-203ENST00000547691 NEFLP07196 543 aa0.47□□□□□ -2.33
CEP290-203ENST00000547691 CA3P07451 260 aa0.47□□□□□ -2.33
CEP290-203ENST00000547691 IQCF3P0C7M6 154 aa0.47□□□□□ -2.33
CEP290-203ENST00000547691 ZNF853P0CG23 659 aa0.47□□□□□ -2.33
CEP290-203ENST00000547691 AKR1A1P14550 325 aa0.47□□□□□ -2.33
CEP290-203ENST00000547691 CSF2RAP15509 400 aa0.47□□□□□ -2.33
CEP290-203ENST00000547691 PCSK2P16519 638 aa0.47□□□□□ -2.33
CEP290-203ENST00000547691 WEE1P30291 646 aa0.47□□□□□ -2.33
CEP290-203ENST00000547691 IL12RB1P42701 662 aa0.47□□□□□ -2.33
CEP290-203ENST00000547691 MAN2A2P49641 1150 aa0.47□□□□□ -2.33
CEP290-203ENST00000547691 ASIC1P78348 528 aa0.47□□□□□ -2.33
CEP290-203ENST00000547691 MGAT3Q09327 533 aa0.47□□□□□ -2.33
CEP290-203ENST00000547691 TTLL4Q14679 1199 aa0.47□□□□□ -2.33
CEP290-203ENST00000547691 COLEC12Q5KU26 742 aa0.47□□□□□ -2.33
CEP290-203ENST00000547691 DYMQ7RTS9 669 aa0.47□□□□□ -2.33
CEP290-203ENST00000547691 METTL3Q86U44 580 aaKnown RBP0.47□□□□□ -2.33
CEP290-203ENST00000547691 HS6ST3Q8IZP7 471 aa0.47□□□□□ -2.33
CEP290-203ENST00000547691 TTC5Q8N0Z6 440 aa0.47□□□□□ -2.33
CEP290-203ENST00000547691 GOLGA6L2Q8N9W4 650 aaPredicted RBP0.47□□□□□ -2.33
CEP290-203ENST00000547691 PCSK9Q8NBP7 692 aaKnown RBP0.47□□□□□ -2.33
CEP290-203ENST00000547691 ACBD4Q8NC06 268 aa0.47□□□□□ -2.33
CEP290-203ENST00000547691 TBC1D22AQ8WUA7 517 aa0.47□□□□□ -2.33
CEP290-203ENST00000547691 SLC22A17Q8WUG5 538 aa0.47□□□□□ -2.33
CEP290-203ENST00000547691 NUP133Q8WUM0 1156 aa0.47□□□□□ -2.33
CEP290-203ENST00000547691 L3MBTL2Q969R5 705 aa0.47□□□□□ -2.33
CEP290-203ENST00000547691 NACC2Q96BF6 587 aa0.47□□□□□ -2.33
CEP290-203ENST00000547691 LTV1Q96GA3 475 aaPredicted RBP0.47□□□□□ -2.33
CEP290-203ENST00000547691 FAM89AQ96GI7 184 aa0.47□□□□□ -2.33
CEP290-203ENST00000547691 ESYT1Q9BSJ8 1104 aa0.47□□□□□ -2.33
CEP290-203ENST00000547691 C1QTNF2Q9BXJ5 285 aa0.47□□□□□ -2.33
CEP290-203ENST00000547691 SIL1Q9H173 461 aa0.47□□□□□ -2.33
CEP290-203ENST00000547691 MROH8Q9H579 483 aa0.47□□□□□ -2.33
CEP290-203ENST00000547691 FAM86C1Q9NVL1 165 aa0.47□□□□□ -2.33
CEP290-203ENST00000547691 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP0.47□□□□□ -2.33
CEP290-203ENST00000547691 ANKMY1Q9P2S6 941 aa0.47□□□□□ -2.33
CEP290-203ENST00000547691 TJP2Q9UDY2 1190 aa0.47□□□□□ -2.33
CEP290-203ENST00000547691 FNDC3AQ9Y2H6 1198 aaKnown RBP0.47□□□□□ -2.33
CEP290-203ENST00000547691 SQORQ9Y6N5 450 aa0.47□□□□□ -2.33
CEP290-203ENST00000547691 NOTCH4Q99466 2003 aa0.47□□□□□ -2.33
CEP290-203ENST00000547691 NRCAMQ92823 1304 aa0.47□□□□□ -2.33
CEP290-203ENST00000547691 USH2AO75445 5202 aa0.47□□□□□ -2.33
CEP290-203ENST00000547691 ZBTB7CA1YPR0 619 aa0.47□□□□□ -2.33
CEP290-203ENST00000547691 PLA2G6O60733 806 aa0.47□□□□□ -2.33
CEP290-203ENST00000547691 TRIM13O60858 407 aa0.47□□□□□ -2.33
CEP290-203ENST00000547691 LGR5O75473 907 aa0.47□□□□□ -2.33
CEP290-203ENST00000547691 SNRPB2P08579 225 aaKnown RBP0.47□□□□□ -2.33
CEP290-203ENST00000547691 SNHG28P0DPA3 235 aa0.47□□□□□ -2.33
CEP290-203ENST00000547691 CEACAM1P13688 526 aa0.47□□□□□ -2.33
CEP290-203ENST00000547691 MYOGP15173 224 aa0.47□□□□□ -2.33
CEP290-203ENST00000547691 NOVP48745 357 aa0.47□□□□□ -2.33
CEP290-203ENST00000547691 HILS1P60008 231 aa0.47□□□□□ -2.33
CEP290-203ENST00000547691 HERVK_113P62684 666 aa0.47□□□□□ -2.33
CEP290-203ENST00000547691 SRSF3P84103 164 aaKnown RBP0.47□□□□□ -2.33
CEP290-203ENST00000547691 LSM12Q3MHD2 195 aaKnown RBP0.47□□□□□ -2.33
CEP290-203ENST00000547691 CCDC152Q4G0S7 254 aa0.47□□□□□ -2.33
CEP290-203ENST00000547691 PLEKHG4Q58EX7 1191 aa0.47□□□□□ -2.33
CEP290-203ENST00000547691 TCEAL5Q5H9L2 206 aa0.47□□□□□ -2.33
CEP290-203ENST00000547691 USP17L2Q6R6M4 530 aa0.47□□□□□ -2.33
CEP290-203ENST00000547691 GSG1LQ6UXU4 331 aa0.47□□□□□ -2.33
CEP290-203ENST00000547691 CCNI2Q6ZMN8 369 aaPredicted RBP0.47□□□□□ -2.33
CEP290-203ENST00000547691 KANSL1Q7Z3B3 1105 aa0.47□□□□□ -2.33
CEP290-203ENST00000547691 RNF180Q86T96 592 aa0.47□□□□□ -2.33
CEP290-203ENST00000547691 RIOX2Q8IUF8 465 aa0.47□□□□□ -2.33
CEP290-203ENST00000547691 CMTR2Q8IYT2 770 aaKnown RBP0.47□□□□□ -2.33
CEP290-203ENST00000547691 LGI4Q8N135 537 aa0.47□□□□□ -2.33
CEP290-203ENST00000547691 OGFOD1Q8N543 542 aa0.47□□□□□ -2.33
CEP290-203ENST00000547691 PJA1Q8NG27 643 aa0.47□□□□□ -2.33
CEP290-203ENST00000547691 TTLL11Q8NHH1 800 aa0.47□□□□□ -2.33
CEP290-203ENST00000547691 CYP2W1Q8TAV3 490 aa0.47□□□□□ -2.33
CEP290-203ENST00000547691 APBB2Q92870 758 aa0.47□□□□□ -2.33
CEP290-203ENST00000547691 EDC3Q96F86 508 aaKnown RBP0.47□□□□□ -2.33
CEP290-203ENST00000547691 ZC3H12CQ9C0D7 883 aaKnown RBP0.47□□□□□ -2.33
CEP290-203ENST00000547691 TMEM39BQ9GZU3 492 aa0.47□□□□□ -2.33
CEP290-203ENST00000547691 KIAA1683Q9H0B3 1180 aa0.47□□□□□ -2.33
CEP290-203ENST00000547691 KCNK4Q9NYG8 393 aa0.47□□□□□ -2.33
CEP290-203ENST00000547691 HERC5Q9UII4 1024 aaKnown RBP0.47□□□□□ -2.33
CEP290-203ENST00000547691 DDX41Q9UJV9 622 aaKnown RBP0.47□□□□□ -2.33
CEP290-203ENST00000547691 FZD1Q9UP38 647 aa0.47□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms