RNA–Protein interactions for RNA: ENST00000547486.1

CPSF6-204, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2

Gene CPSF6, Length 872 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-204ENST00000547486 BAG4O95429 457 aaKnown RBP14.92□□□□□ -0.02
CPSF6-204ENST00000547486 ALADP13716 330 aa14.92□□□□□ -0.02
CPSF6-204ENST00000547486 HOXA11P31270 313 aaPredicted RBP14.92□□□□□ -0.02
CPSF6-204ENST00000547486 RFC5P40937 340 aa14.92□□□□□ -0.02
CPSF6-204ENST00000547486 POLGP54098 1239 aaPredicted RBP14.92□□□□□ -0.02
CPSF6-204ENST00000547486 BCAR1P56945 870 aa14.92□□□□□ -0.02
CPSF6-204ENST00000547486 KRT17Q04695 432 aa14.92□□□□□ -0.02
CPSF6-204ENST00000547486 LAMTOR4Q0VGL1 99 aa14.92□□□□□ -0.02
CPSF6-204ENST00000547486 XKR9Q5GH70 373 aa14.92□□□□□ -0.02
CPSF6-204ENST00000547486 TWF2Q6IBS0 349 aaKnown RBP14.92□□□□□ -0.02
CPSF6-204ENST00000547486 OTUD6AQ7L8S5 288 aa14.92□□□□□ -0.02
CPSF6-204ENST00000547486 DIS3L2Q8IYB7 885 aaKnown RBP14.92□□□□□ -0.02
CPSF6-204ENST00000547486 MTMR9Q96QG7 549 aa14.92□□□□□ -0.02
CPSF6-204ENST00000547486 EIF2AK1Q9BQI3 630 aaKnown RBP14.92□□□□□ -0.02
CPSF6-204ENST00000547486 FAM105AQ9NUU6 356 aa14.92□□□□□ -0.02
CPSF6-204ENST00000547486 PCDHA12Q9UN75 941 aa14.92□□□□□ -0.02
CPSF6-204ENST00000547486 DCXO43602 365 aa14.91□□□□□ -0.02
CPSF6-204ENST00000547486 OFD1O75665 1012 aa14.91□□□□□ -0.02
CPSF6-204ENST00000547486 AFF1P51825 1210 aaKnown RBP14.91□□□□□ -0.02
CPSF6-204ENST00000547486 EMC2Q15006 297 aa14.91□□□□□ -0.02
CPSF6-204ENST00000547486 CALCRLQ16602 461 aa14.91□□□□□ -0.02
CPSF6-204ENST00000547486 UBXN11Q5T124 520 aa14.91□□□□□ -0.02
CPSF6-204ENST00000547486 TMEM184AQ6ZMB5 413 aa14.91□□□□□ -0.02
CPSF6-204ENST00000547486 TMEM173Q86WV6 379 aaPredicted RBP14.91□□□□□ -0.02
CPSF6-204ENST00000547486 PSPC1Q8WXF1 523 aaKnown RBP14.91□□□□□ -0.02
CPSF6-204ENST00000547486 CDCA3Q99618 268 aaPredicted RBP14.91□□□□□ -0.02
CPSF6-204ENST00000547486 TTC12Q9H892 705 aaPredicted RBP14.91□□□□□ -0.02
CPSF6-204ENST00000547486 BRMS1Q9HCU9 246 aa14.91□□□□□ -0.02
CPSF6-204ENST00000547486 XPNPEP1Q9NQW7 623 aa14.91□□□□□ -0.02
CPSF6-204ENST00000547486 ENTPD7Q9NQZ7 604 aa14.91□□□□□ -0.02
CPSF6-204ENST00000547486 AGPAT5Q9NUQ2 364 aa14.91□□□□□ -0.02
CPSF6-204ENST00000547486 USP15Q9Y4E8 981 aaPredicted RBP14.91□□□□□ -0.02
CPSF6-204ENST00000547486 PPME1Q9Y570 386 aa14.91□□□□□ -0.02
CPSF6-204ENST00000547486 PCDHB2Q9Y5E7 798 aa14.91□□□□□ -0.02
CPSF6-204ENST00000547486 PPM1AP35813 382 aa14.9□□□□□ -0.02
CPSF6-204ENST00000547486 TXKP42681 527 aa14.9□□□□□ -0.02
CPSF6-204ENST00000547486 ALDH7A1P49419 539 aaKnown RBP14.9□□□□□ -0.02
CPSF6-204ENST00000547486 GUCY1B3Q02153 619 aa14.9□□□□□ -0.02
CPSF6-204ENST00000547486 LLGL2Q6P1M3 1020 aa14.9□□□□□ -0.02
CPSF6-204ENST00000547486 AGMOQ6ZNB7 445 aa14.9□□□□□ -0.02
CPSF6-204ENST00000547486 TMC7Q7Z402 723 aa14.9□□□□□ -0.02
CPSF6-204ENST00000547486 SRGAP1Q7Z6B7 1085 aa14.9□□□□□ -0.02
CPSF6-204ENST00000547486 FERMT3Q86UX7 667 aa14.9□□□□□ -0.02
CPSF6-204ENST00000547486 RNF135Q8IUD6 432 aa14.9□□□□□ -0.02
CPSF6-204ENST00000547486 EXOC8Q8IYI6 725 aa14.9□□□□□ -0.02
CPSF6-204ENST00000547486 MRPL43Q8N983 215 aaKnown RBP14.9□□□□□ -0.02
CPSF6-204ENST00000547486 RNF149Q8NC42 400 aa14.9□□□□□ -0.02
CPSF6-204ENST00000547486 S1PR5Q9H228 398 aa14.9□□□□□ -0.02
CPSF6-204ENST00000547486 TMEM60Q9H2L4 133 aa14.9□□□□□ -0.02
CPSF6-204ENST00000547486 NRDE2Q9H7Z3 1164 aa14.9□□□□□ -0.02
CPSF6-204ENST00000547486 NGRNQ9NPE2 291 aaKnown RBP14.9□□□□□ -0.02
CPSF6-204ENST00000547486 TBC1D13Q9NVG8 400 aa14.9□□□□□ -0.02
CPSF6-204ENST00000547486 MUTYHQ9UIF7 546 aa14.9□□□□□ -0.02
CPSF6-204ENST00000547486 C2orf71A6NGG8 1288 aa14.89□□□□□ -0.03
CPSF6-204ENST00000547486 PRR33A8MZF0 331 aa14.89□□□□□ -0.03
CPSF6-204ENST00000547486 LOC730098B7Z3J9 87 aa14.89□□□□□ -0.03
CPSF6-204ENST00000547486 ASAP2O43150 1006 aa14.89□□□□□ -0.03
CPSF6-204ENST00000547486 B4GALT3O60512 393 aa14.89□□□□□ -0.03
CPSF6-204ENST00000547486 NEMFO60524 1076 aa14.89□□□□□ -0.03
CPSF6-204ENST00000547486 LYPLA2O95372 231 aa14.89□□□□□ -0.03
CPSF6-204ENST00000547486 GALTP07902 379 aa14.89□□□□□ -0.03
CPSF6-204ENST00000547486 SKIP12755 728 aa14.89□□□□□ -0.03
CPSF6-204ENST00000547486 TECP42680 631 aa14.89□□□□□ -0.03
CPSF6-204ENST00000547486 TRIM29Q14134 588 aa14.89□□□□□ -0.03
CPSF6-204ENST00000547486 NOMO2Q5JPE7 1267 aa14.89□□□□□ -0.03
CPSF6-204ENST00000547486 SYCE2Q6PIF2 218 aa14.89□□□□□ -0.03
CPSF6-204ENST00000547486 GLB1LQ6UWU2 654 aa14.89□□□□□ -0.03
CPSF6-204ENST00000547486 MRPL10Q7Z7H8 261 aaKnown RBP14.89□□□□□ -0.03
CPSF6-204ENST00000547486 ZNF280BQ86YH2 543 aa14.89□□□□□ -0.03
CPSF6-204ENST00000547486 BCL7CQ8WUZ0 217 aaPredicted RBP14.89□□□□□ -0.03
CPSF6-204ENST00000547486 TCP11Q8WWU5 503 aa14.89□□□□□ -0.03
CPSF6-204ENST00000547486 SUSD6Q92537 303 aa14.89□□□□□ -0.03
CPSF6-204ENST00000547486 POP1Q99575 1024 aaKnown RBP14.89□□□□□ -0.03
CPSF6-204ENST00000547486 KIF2CQ99661 725 aa14.89□□□□□ -0.03
CPSF6-204ENST00000547486 MTRQ99707 1265 aa14.89□□□□□ -0.03
CPSF6-204ENST00000547486 APOL5Q9BWW9 433 aa14.89□□□□□ -0.03
CPSF6-204ENST00000547486 MRPL9Q9BYD2 267 aaKnown RBP14.89□□□□□ -0.03
CPSF6-204ENST00000547486 DNAJB4Q9UDY4 337 aa14.89□□□□□ -0.03
CPSF6-204ENST00000547486 LIMCH1Q9UPQ0 1083 aa14.89□□□□□ -0.03
CPSF6-204ENST00000547486 INPP5FQ9Y2H2 1132 aa14.89□□□□□ -0.03
CPSF6-204ENST00000547486 ZC3H11AO75152 810 aaKnown RBP eCLIP14.88□□□□□ -0.03
CPSF6-204ENST00000547486 CXCL14O95715 111 aa14.88□□□□□ -0.03
CPSF6-204ENST00000547486 ATP2B1P20020 1258 aa14.88□□□□□ -0.03
CPSF6-204ENST00000547486 RAB27AP51159 221 aa14.88□□□□□ -0.03
CPSF6-204ENST00000547486 ANKRD54Q6NXT1 300 aa14.88□□□□□ -0.03
CPSF6-204ENST00000547486 CCDC83Q8IWF9 413 aa14.88□□□□□ -0.03
CPSF6-204ENST00000547486 ASAP3Q8TDY4 903 aa14.88□□□□□ -0.03
CPSF6-204ENST00000547486 PIGOQ8TEQ8 1089 aa14.88□□□□□ -0.03
CPSF6-204ENST00000547486 AUTS2Q8WXX7 1259 aa14.88□□□□□ -0.03
CPSF6-204ENST00000547486 ANKEF1Q9NU02 776 aa14.88□□□□□ -0.03
CPSF6-204ENST00000547486 POTEMA6NI47 508 aa14.87□□□□□ -0.03
CPSF6-204ENST00000547486 GAS2O43903 313 aaKnown RBP14.87□□□□□ -0.03
CPSF6-204ENST00000547486 EIF5BO60841 1220 aaKnown RBP14.87□□□□□ -0.03
CPSF6-204ENST00000547486 CLASP2O75122 1294 aaKnown RBP14.87□□□□□ -0.03
CPSF6-204ENST00000547486 DDHD2O94830 711 aa14.87□□□□□ -0.03
CPSF6-204ENST00000547486 SPATA31C1P0DKV0 1188 aa14.87□□□□□ -0.03
CPSF6-204ENST00000547486 MCM7P33993 719 aa14.87□□□□□ -0.03
CPSF6-204ENST00000547486 ARL2P36404 184 aa14.87□□□□□ -0.03
CPSF6-204ENST00000547486 SLC11A1P49279 550 aa14.87□□□□□ -0.03
CPSF6-204ENST00000547486 RARRES1P49788 294 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms