RNA–Protein interactions for RNA: ENST00000547263.1

GCN1-202, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-202ENST00000547263 KIFAP3Q92845 792 aa12.13□□□□□ -0.47
GCN1-202ENST00000547263 YME1L1Q96TA2 773 aa12.13□□□□□ -0.47
GCN1-202ENST00000547263 NTPCRQ9BSD7 190 aaKnown RBP12.13□□□□□ -0.47
GCN1-202ENST00000547263 TIPINQ9BVW5 301 aa12.13□□□□□ -0.47
GCN1-202ENST00000547263 FZD8Q9H461 694 aa12.13□□□□□ -0.47
GCN1-202ENST00000547263 PRDM12Q9H4Q4 367 aa12.13□□□□□ -0.47
GCN1-202ENST00000547263 C17orf75Q9HAS0 396 aa12.13□□□□□ -0.47
GCN1-202ENST00000547263 LMCD1Q9NZU5 365 aa12.13□□□□□ -0.47
GCN1-202ENST00000547263 DNM3Q9UQ16 869 aa12.13□□□□□ -0.47
GCN1-202ENST00000547263 DENND3A2RUS2 1198 aa12.12□□□□□ -0.47
GCN1-202ENST00000547263 TSPAN1O60635 241 aa12.12□□□□□ -0.47
GCN1-202ENST00000547263 UPP2O95045 317 aa12.12□□□□□ -0.47
GCN1-202ENST00000547263 RB1P06400 928 aa12.12□□□□□ -0.47
GCN1-202ENST00000547263 SRGAP2CP0DJJ0 459 aa12.12□□□□□ -0.47
GCN1-202ENST00000547263 ZSCAN20P17040 1043 aaPredicted RBP12.12□□□□□ -0.47
GCN1-202ENST00000547263 ARSHQ5FYA8 562 aa12.12□□□□□ -0.47
GCN1-202ENST00000547263 FAM117BQ6P1L5 589 aa12.12□□□□□ -0.47
GCN1-202ENST00000547263 USP49Q70CQ1 688 aa12.12□□□□□ -0.47
GCN1-202ENST00000547263 CCDC51Q96ER9 411 aa12.12□□□□□ -0.47
GCN1-202ENST00000547263 PRIMPOLQ96LW4 560 aa12.12□□□□□ -0.47
GCN1-202ENST00000547263 C17orf80Q9BSJ5 609 aa12.12□□□□□ -0.47
GCN1-202ENST00000547263 RUSC1Q9BVN2 902 aa12.12□□□□□ -0.47
GCN1-202ENST00000547263 CSRNP2Q9H175 543 aa12.12□□□□□ -0.47
GCN1-202ENST00000547263 RWDD3Q9Y3V2 267 aa12.12□□□□□ -0.47
GCN1-202ENST00000547263 ZMYM2Q9UBW7 1377 aa12.12□□□□□ -0.47
GCN1-202ENST00000547263 PLXNA4Q9HCM2 1894 aa12.11□□□□□ -0.47
GCN1-202ENST00000547263 A0A1B0GUA9 196 aa12.11□□□□□ -0.47
GCN1-202ENST00000547263 H3BNC9 293 aa12.11□□□□□ -0.47
GCN1-202ENST00000547263 SKIP12755 728 aa12.11□□□□□ -0.47
GCN1-202ENST00000547263 ARF4P18085 180 aaPredicted RBP12.11□□□□□ -0.47
GCN1-202ENST00000547263 MARCKSP29966 332 aaPredicted RBP12.11□□□□□ -0.47
GCN1-202ENST00000547263 BMPR1AP36894 532 aa12.11□□□□□ -0.47
GCN1-202ENST00000547263 RAB27AP51159 221 aa12.11□□□□□ -0.47
GCN1-202ENST00000547263 ZNF131P52739 623 aa12.11□□□□□ -0.47
GCN1-202ENST00000547263 EPC2Q52LR7 807 aa12.11□□□□□ -0.47
GCN1-202ENST00000547263 NAALADL2Q58DX5 795 aa12.11□□□□□ -0.47
GCN1-202ENST00000547263 CLLU1OSQ5K130 101 aa12.11□□□□□ -0.47
GCN1-202ENST00000547263 FAM102BQ5T8I3 360 aa12.11□□□□□ -0.47
GCN1-202ENST00000547263 CATSPER4Q7RTX7 472 aa12.11□□□□□ -0.47
GCN1-202ENST00000547263 TMEM192Q8IY95 271 aa12.11□□□□□ -0.47
GCN1-202ENST00000547263 FIBCD1Q8N539 461 aa12.11□□□□□ -0.47
GCN1-202ENST00000547263 P2RX5Q93086 422 aa12.11□□□□□ -0.47
GCN1-202ENST00000547263 EPSTI1Q96J88 318 aa12.11□□□□□ -0.47
GCN1-202ENST00000547263 CASD1Q96PB1 797 aa12.11□□□□□ -0.47
GCN1-202ENST00000547263 PLVAPQ9BX97 442 aa12.11□□□□□ -0.47
GCN1-202ENST00000547263 TMEM117Q9H0C3 514 aa12.11□□□□□ -0.47
GCN1-202ENST00000547263 FAM105AQ9NUU6 356 aa12.11□□□□□ -0.47
GCN1-202ENST00000547263 ARHGAP28Q9P2N2 729 aa12.11□□□□□ -0.47
GCN1-202ENST00000547263 PIN4Q9Y237 131 aaKnown RBP12.11□□□□□ -0.47
GCN1-202ENST00000547263 PCDHB7Q9Y5E2 793 aa12.11□□□□□ -0.47
GCN1-202ENST00000547263 MRPL42Q9Y6G3 142 aaKnown RBP12.11□□□□□ -0.47
GCN1-202ENST00000547263 TCHHQ07283 1943 aa12.11□□□□□ -0.47
GCN1-202ENST00000547263 CNTNAP2Q9UHC6 1331 aa12.11□□□□□ -0.47
GCN1-202ENST00000547263 HOXA2O43364 376 aa12.1□□□□□ -0.47
GCN1-202ENST00000547263 EDN1P05305 212 aa12.1□□□□□ -0.47
GCN1-202ENST00000547263 PLA2G4BP0C869 781 aa12.1□□□□□ -0.47
GCN1-202ENST00000547263 PLCG1P19174 1290 aa12.1□□□□□ -0.47
GCN1-202ENST00000547263 UBA7P41226 1012 aa12.1□□□□□ -0.47
GCN1-202ENST00000547263 GATMP50440 423 aa12.1□□□□□ -0.47
GCN1-202ENST00000547263 BTG3Q14201 252 aaPredicted RBP12.1□□□□□ -0.47
GCN1-202ENST00000547263 KARSQ15046 597 aaKnown RBP12.1□□□□□ -0.47
GCN1-202ENST00000547263 PPP2R5AQ15172 486 aa12.1□□□□□ -0.47
GCN1-202ENST00000547263 AXDND1Q5T1B0 1012 aaPredicted RBP12.1□□□□□ -0.47
GCN1-202ENST00000547263 LRRC55Q6ZSA7 311 aa12.1□□□□□ -0.47
GCN1-202ENST00000547263 KRI1Q8N9T8 703 aaKnown RBP12.1□□□□□ -0.47
GCN1-202ENST00000547263 SMG8Q8ND04 991 aaKnown RBP12.1□□□□□ -0.47
GCN1-202ENST00000547263 SPIRE2Q8WWL2 714 aa12.1□□□□□ -0.47
GCN1-202ENST00000547263 SYMPKQ92797 1274 aaKnown RBP12.1□□□□□ -0.47
GCN1-202ENST00000547263 CCDC43Q96MW1 224 aaKnown RBP12.1□□□□□ -0.47
GCN1-202ENST00000547263 ZNF396Q96N95 335 aaPredicted RBP12.1□□□□□ -0.47
GCN1-202ENST00000547263 SCLT1Q96NL6 688 aa12.1□□□□□ -0.47
GCN1-202ENST00000547263 CLIC6Q96NY7 704 aa12.1□□□□□ -0.47
GCN1-202ENST00000547263 C2orf40Q9H1Z8 148 aa12.1□□□□□ -0.47
GCN1-202ENST00000547263 CWH43Q9H720 699 aa12.1□□□□□ -0.47
GCN1-202ENST00000547263 PRMT7Q9NVM4 692 aaPredicted RBP12.1□□□□□ -0.47
GCN1-202ENST00000547263 STK17AQ9UEE5 414 aa12.1□□□□□ -0.47
GCN1-202ENST00000547263 MTCH2Q9Y6C9 303 aa12.1□□□□□ -0.47
GCN1-202ENST00000547263 PRRC2BQ5JSZ5 2229 aaKnown RBP12.09□□□□□ -0.47
GCN1-202ENST00000547263 A0A087X0B3 334 aa12.09□□□□□ -0.47
GCN1-202ENST00000547263 RFXAPO00287 272 aa12.09□□□□□ -0.47
GCN1-202ENST00000547263 SPTLC2O15270 562 aa12.09□□□□□ -0.47
GCN1-202ENST00000547263 HIP1RO75146 1068 aa12.09□□□□□ -0.47
GCN1-202ENST00000547263 HSP90AA1P07900 732 aaKnown RBP12.09□□□□□ -0.47
GCN1-202ENST00000547263 FGFR1P11362 822 aa12.09□□□□□ -0.47
GCN1-202ENST00000547263 FOSL2P15408 326 aa12.09□□□□□ -0.47
GCN1-202ENST00000547263 NCLP19338 710 aaKnown RBP12.09□□□□□ -0.47
GCN1-202ENST00000547263 NPTX2P47972 431 aa12.09□□□□□ -0.47
GCN1-202ENST00000547263 E2F4Q16254 413 aa12.09□□□□□ -0.47
GCN1-202ENST00000547263 NOTUMQ6P988 496 aa12.09□□□□□ -0.47
GCN1-202ENST00000547263 AGMOQ6ZNB7 445 aa12.09□□□□□ -0.47
GCN1-202ENST00000547263 MAEAQ7L5Y9 396 aa12.09□□□□□ -0.47
GCN1-202ENST00000547263 TAS1R3Q7RTX0 852 aa12.09□□□□□ -0.47
GCN1-202ENST00000547263 CNNM3Q8NE01 707 aa12.09□□□□□ -0.47
GCN1-202ENST00000547263 ARNTL2Q8WYA1 636 aa12.09□□□□□ -0.47
GCN1-202ENST00000547263 RAD54LQ92698 747 aa12.09□□□□□ -0.47
GCN1-202ENST00000547263 CALML4Q96GE6 196 aa12.09□□□□□ -0.47
GCN1-202ENST00000547263 DRC1Q96MC2 740 aa12.09□□□□□ -0.47
GCN1-202ENST00000547263 FIZ1Q96SL8 496 aa12.09□□□□□ -0.47
GCN1-202ENST00000547263 GAS2L1Q99501 681 aaPredicted RBP12.09□□□□□ -0.47
GCN1-202ENST00000547263 TMEM134Q9H6X4 195 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms