RNA–Protein interactions for RNA: ENST00000547063.5

TRAFD1-203, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 3

Gene TRAFD1, Length 867 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-203ENST00000547063 NLRP4Q96MN2 994 aa17.42■□□□□ 0.38
TRAFD1-203ENST00000547063 SCLT1Q96NL6 688 aa17.42■□□□□ 0.38
TRAFD1-203ENST00000547063 INO80BQ9C086 356 aaPredicted RBP17.42■□□□□ 0.38
TRAFD1-203ENST00000547063 FAM49AQ9H0Q0 323 aaPredicted RBP17.42■□□□□ 0.38
TRAFD1-203ENST00000547063 CGNQ9P2M7 1197 aaKnown RBP17.42■□□□□ 0.38
TRAFD1-203ENST00000547063 TRIP12Q14669 1992 aaPredicted RBP17.42■□□□□ 0.38
TRAFD1-203ENST00000547063 PDXKO00764 312 aa17.41■□□□□ 0.38
TRAFD1-203ENST00000547063 CAND2O75155 1236 aa17.41■□□□□ 0.38
TRAFD1-203ENST00000547063 PRPF6O94906 941 aaKnown RBP17.41■□□□□ 0.38
TRAFD1-203ENST00000547063 CASP5P51878 434 aa17.41■□□□□ 0.38
TRAFD1-203ENST00000547063 PTENP60484 403 aa17.41■□□□□ 0.38
TRAFD1-203ENST00000547063 ZNF200P98182 395 aaPredicted RBP17.41■□□□□ 0.38
TRAFD1-203ENST00000547063 PCBP1Q15365 356 aaKnown RBP eCLIP17.41■□□□□ 0.38
TRAFD1-203ENST00000547063 CENPPQ6IPU0 288 aa17.41■□□□□ 0.38
TRAFD1-203ENST00000547063 HS2ST1Q7LGA3 356 aa17.41■□□□□ 0.38
TRAFD1-203ENST00000547063 SYCP3Q8IZU3 236 aa17.41■□□□□ 0.38
TRAFD1-203ENST00000547063 NLRP7Q8WX94 980 aa17.41■□□□□ 0.38
TRAFD1-203ENST00000547063 FGFBP2Q9BYJ0 223 aa17.41■□□□□ 0.38
TRAFD1-203ENST00000547063 TBX20Q9UMR3 447 aa17.41■□□□□ 0.38
TRAFD1-203ENST00000547063 CTNND2Q9UQB3 1225 aa17.41■□□□□ 0.38
TRAFD1-203ENST00000547063 GOLGA6L19H0YKK7 550 aa17.4■□□□□ 0.38
TRAFD1-203ENST00000547063 TLR3O15455 904 aaKnown RBP17.4■□□□□ 0.38
TRAFD1-203ENST00000547063 CALUO43852 315 aaPredicted RBP17.4■□□□□ 0.38
TRAFD1-203ENST00000547063 FGFR1OPO95684 399 aaKnown RBP17.4■□□□□ 0.38
TRAFD1-203ENST00000547063 VTNP04004 478 aa17.4■□□□□ 0.38
TRAFD1-203ENST00000547063 GPC3P51654 580 aa17.4■□□□□ 0.38
TRAFD1-203ENST00000547063 NLRP11P59045 1033 aaKnown RBP17.4■□□□□ 0.38
TRAFD1-203ENST00000547063 HIC1Q14526 733 aa17.4■□□□□ 0.38
TRAFD1-203ENST00000547063 MAPK6Q16659 721 aa17.4■□□□□ 0.38
TRAFD1-203ENST00000547063 TPD52L1Q16890 204 aaPredicted RBP17.4■□□□□ 0.38
TRAFD1-203ENST00000547063 EDRF1Q3B7T1 1238 aa17.4■□□□□ 0.38
TRAFD1-203ENST00000547063 ZC2HC1CQ53FD0 456 aaPredicted RBP17.4■□□□□ 0.38
TRAFD1-203ENST00000547063 RUFY4Q6ZNE9 571 aa17.4■□□□□ 0.38
TRAFD1-203ENST00000547063 SRGAP1Q7Z6B7 1085 aa17.4■□□□□ 0.38
TRAFD1-203ENST00000547063 MAP4K3Q8IVH8 894 aa17.4■□□□□ 0.38
TRAFD1-203ENST00000547063 NELFCDQ8IXH7 590 aa17.4■□□□□ 0.38
TRAFD1-203ENST00000547063 GLIS3Q8NEA6 775 aa17.4■□□□□ 0.38
TRAFD1-203ENST00000547063 DNAJB3Q8WWF6 145 aa17.4■□□□□ 0.38
TRAFD1-203ENST00000547063 ZBTB10Q96DT7 871 aa17.4■□□□□ 0.38
TRAFD1-203ENST00000547063 GCOM2Q9BZD3 368 aaPredicted RBP17.4■□□□□ 0.38
TRAFD1-203ENST00000547063 SENP6Q9GZR1 1112 aaPredicted RBP17.4■□□□□ 0.38
TRAFD1-203ENST00000547063 GBP3Q9H0R5 595 aa17.4■□□□□ 0.38
TRAFD1-203ENST00000547063 CBX8Q9HC52 389 aa17.4■□□□□ 0.38
TRAFD1-203ENST00000547063 TYW1Q9NV66 732 aaKnown RBP17.4■□□□□ 0.38
TRAFD1-203ENST00000547063 RPL13P26373 211 aaKnown RBP17.39■□□□□ 0.37
TRAFD1-203ENST00000547063 CDK7P50613 346 aa17.39■□□□□ 0.37
TRAFD1-203ENST00000547063 HSP90AA2PQ14568 343 aaPredicted RBP17.39■□□□□ 0.37
TRAFD1-203ENST00000547063 GSE1Q14687 1217 aa17.39■□□□□ 0.37
TRAFD1-203ENST00000547063 C1orf53Q5VUE5 145 aa17.39■□□□□ 0.37
TRAFD1-203ENST00000547063 SPATA1Q5VX52 437 aa17.39■□□□□ 0.37
TRAFD1-203ENST00000547063 GAS2L3Q86XJ1 694 aa17.39■□□□□ 0.37
TRAFD1-203ENST00000547063 KSR1Q8IVT5 923 aa17.39■□□□□ 0.37
TRAFD1-203ENST00000547063 CCDC155Q8N6L0 562 aa17.39■□□□□ 0.37
TRAFD1-203ENST00000547063 AOPEPQ8N6M6 819 aa17.39■□□□□ 0.37
TRAFD1-203ENST00000547063 NOC3LQ8WTT2 800 aaKnown RBP17.39■□□□□ 0.37
TRAFD1-203ENST00000547063 PPP1R13LQ8WUF5 828 aa17.39■□□□□ 0.37
TRAFD1-203ENST00000547063 KIFC3Q9BVG8 833 aa17.39■□□□□ 0.37
TRAFD1-203ENST00000547063 KCTD10Q9H3F6 313 aa17.39■□□□□ 0.37
TRAFD1-203ENST00000547063 PRMT7Q9NVM4 692 aaPredicted RBP17.39■□□□□ 0.37
TRAFD1-203ENST00000547063 TRAF3IP3Q9Y228 551 aa17.39■□□□□ 0.37
TRAFD1-203ENST00000547063 ADGRA3Q8IWK6 1321 aa17.39■□□□□ 0.37
TRAFD1-203ENST00000547063 A0A087WZ62 844 aa17.38■□□□□ 0.37
TRAFD1-203ENST00000547063 GOLGA6L3A6NEY3 463 aa17.38■□□□□ 0.37
TRAFD1-203ENST00000547063 INO80B-WBP1J3KQ70 363 aa17.38■□□□□ 0.37
TRAFD1-203ENST00000547063 COL6A1P12109 1028 aa17.38■□□□□ 0.37
TRAFD1-203ENST00000547063 CRYBB1P53674 252 aaPredicted RBP17.38■□□□□ 0.37
TRAFD1-203ENST00000547063 MRPS6P82932 125 aaKnown RBP17.38■□□□□ 0.37
TRAFD1-203ENST00000547063 IQCB1Q15051 598 aa17.38■□□□□ 0.37
TRAFD1-203ENST00000547063 BICD1Q96G01 975 aa17.38■□□□□ 0.37
TRAFD1-203ENST00000547063 PRIMPOLQ96LW4 560 aa17.38■□□□□ 0.37
TRAFD1-203ENST00000547063 FDXACB1Q9BRP7 624 aaPredicted RBP17.38■□□□□ 0.37
TRAFD1-203ENST00000547063 MRPL4Q9BYD3 311 aaKnown RBP17.38■□□□□ 0.37
TRAFD1-203ENST00000547063 ADAMTS10Q9H324 1103 aa17.38■□□□□ 0.37
TRAFD1-203ENST00000547063 IFT122Q9HBG6 1241 aa17.38■□□□□ 0.37
TRAFD1-203ENST00000547063 SIP14410 1827 aa17.37■□□□□ 0.37
TRAFD1-203ENST00000547063 HTTP42858 3142 aa17.37■□□□□ 0.37
TRAFD1-203ENST00000547063 HNRNPDLO14979 420 aaKnown RBP17.37■□□□□ 0.37
TRAFD1-203ENST00000547063 GPR32O75388 356 aa17.37■□□□□ 0.37
TRAFD1-203ENST00000547063 PIGRP01833 764 aa17.37■□□□□ 0.37
TRAFD1-203ENST00000547063 PRKCBP05771 671 aa17.37■□□□□ 0.37
TRAFD1-203ENST00000547063 MNX1P50219 401 aaPredicted RBP17.37■□□□□ 0.37
TRAFD1-203ENST00000547063 STX17P56962 302 aa17.37■□□□□ 0.37
TRAFD1-203ENST00000547063 FKBP3Q00688 224 aaKnown RBP17.37■□□□□ 0.37
TRAFD1-203ENST00000547063 NCBP1Q09161 790 aaKnown RBP17.37■□□□□ 0.37
TRAFD1-203ENST00000547063 MYBPC2Q14324 1141 aa17.37■□□□□ 0.37
TRAFD1-203ENST00000547063 NFIL3Q16649 462 aa17.37■□□□□ 0.37
TRAFD1-203ENST00000547063 FAM187BQ17R55 369 aa17.37■□□□□ 0.37
TRAFD1-203ENST00000547063 KIZQ2M2Z5 673 aa17.37■□□□□ 0.37
TRAFD1-203ENST00000547063 ZCWPW2Q504Y3 356 aa17.37■□□□□ 0.37
TRAFD1-203ENST00000547063 ANKRD40Q6AI12 368 aa17.37■□□□□ 0.37
TRAFD1-203ENST00000547063 TTI2Q6NXR4 508 aa17.37■□□□□ 0.37
TRAFD1-203ENST00000547063 ZPBP2Q6X784 338 aa17.37■□□□□ 0.37
TRAFD1-203ENST00000547063 SLC39A5Q6ZMH5 540 aa17.37■□□□□ 0.37
TRAFD1-203ENST00000547063 DHX40Q8IX18 779 aaKnown RBP17.37■□□□□ 0.37
TRAFD1-203ENST00000547063 CSGALNACT2Q8N6G5 542 aa17.37■□□□□ 0.37
TRAFD1-203ENST00000547063 CAGE1Q8TC20 777 aa17.37■□□□□ 0.37
TRAFD1-203ENST00000547063 TOX2Q96NM4 488 aa17.37■□□□□ 0.37
TRAFD1-203ENST00000547063 CELF4Q9BZC1 486 aaKnown RBP17.37■□□□□ 0.37
TRAFD1-203ENST00000547063 CCDC113Q9H0I3 377 aa17.37■□□□□ 0.37
TRAFD1-203ENST00000547063 SEMA6BQ9H3T3 888 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms