RNA–Protein interactions for RNA: ENST00000547055.1

RAB3IP-209, Transcript of RAB3A interacting protein, humanhuman

TSL 3

Gene RAB3IP, Length 438 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-209ENST00000547055 ATXN2LQ8WWM7 1075 aaKnown RBP4.79□□□□□ -1.64
RAB3IP-209ENST00000547055 UBXN4Q92575 508 aa4.79□□□□□ -1.64
RAB3IP-209ENST00000547055 HIST1H2AHQ96KK5 128 aa4.79□□□□□ -1.64
RAB3IP-209ENST00000547055 ZNF512Q96ME7 567 aaPredicted RBP4.79□□□□□ -1.64
RAB3IP-209ENST00000547055 UIMC1Q96RL1 719 aa4.79□□□□□ -1.64
RAB3IP-209ENST00000547055 HIST1H2AJQ99878 128 aa4.79□□□□□ -1.64
RAB3IP-209ENST00000547055 ORAI3Q9BRQ5 295 aa4.79□□□□□ -1.64
RAB3IP-209ENST00000547055 OSBPL6Q9BZF3 934 aa4.79□□□□□ -1.64
RAB3IP-209ENST00000547055 CD2APQ9Y5K6 639 aa4.79□□□□□ -1.64
RAB3IP-209ENST00000547055 XDHP47989 1333 aa4.78□□□□□ -1.64
RAB3IP-209ENST00000547055 A0A0A6YYK5 440 aaPredicted RBP4.78□□□□□ -1.64
RAB3IP-209ENST00000547055 ZNF891A8MT65 544 aaPredicted RBP4.78□□□□□ -1.64
RAB3IP-209ENST00000547055 RPS6KA4O75676 772 aa4.78□□□□□ -1.64
RAB3IP-209ENST00000547055 IPO13O94829 963 aaKnown RBP4.78□□□□□ -1.64
RAB3IP-209ENST00000547055 PCDH8O95206 1070 aa4.78□□□□□ -1.64
RAB3IP-209ENST00000547055 RABGGTBP53611 331 aa4.78□□□□□ -1.64
RAB3IP-209ENST00000547055 PURAQ00577 322 aaKnown RBP4.78□□□□□ -1.64
RAB3IP-209ENST00000547055 TOB2Q14106 344 aaPredicted RBP4.78□□□□□ -1.64
RAB3IP-209ENST00000547055 SPIDRQ14159 915 aa4.78□□□□□ -1.64
RAB3IP-209ENST00000547055 CNNM4Q6P4Q7 775 aa4.78□□□□□ -1.64
RAB3IP-209ENST00000547055 KIF18BQ86Y91 864 aa4.78□□□□□ -1.64
RAB3IP-209ENST00000547055 HOMER1Q86YM7 354 aa4.78□□□□□ -1.64
RAB3IP-209ENST00000547055 EFHBQ8N7U6 833 aa4.78□□□□□ -1.64
RAB3IP-209ENST00000547055 CHTF18Q8WVB6 975 aa4.78□□□□□ -1.64
RAB3IP-209ENST00000547055 PGBD4Q96DM1 585 aa4.78□□□□□ -1.64
RAB3IP-209ENST00000547055 RNPC3Q96LT9 517 aaKnown RBP4.78□□□□□ -1.64
RAB3IP-209ENST00000547055 MNTQ99583 582 aa4.78□□□□□ -1.64
RAB3IP-209ENST00000547055 SOX7Q9BT81 388 aa4.78□□□□□ -1.64
RAB3IP-209ENST00000547055 ZMAT4Q9H898 229 aa4.78□□□□□ -1.64
RAB3IP-209ENST00000547055 THG1LQ9NWX6 298 aaKnown RBP4.78□□□□□ -1.64
RAB3IP-209ENST00000547055 KLRG2A4D1S0 409 aaPredicted RBP4.77□□□□□ -1.65
RAB3IP-209ENST00000547055 GOLGA6L6A8MZA4 724 aa4.77□□□□□ -1.65
RAB3IP-209ENST00000547055 MTSS1O43312 755 aa4.77□□□□□ -1.65
RAB3IP-209ENST00000547055 FAM20BO75063 409 aa4.77□□□□□ -1.65
RAB3IP-209ENST00000547055 GNAT2P19087 354 aa4.77□□□□□ -1.65
RAB3IP-209ENST00000547055 DSG1Q02413 1049 aa4.77□□□□□ -1.65
RAB3IP-209ENST00000547055 LRRC32Q14392 662 aa4.77□□□□□ -1.65
RAB3IP-209ENST00000547055 SMN1Q16637 294 aaKnown RBP4.77□□□□□ -1.65
RAB3IP-209ENST00000547055 ESPNLQ6ZVH7 1005 aa4.77□□□□□ -1.65
RAB3IP-209ENST00000547055 ZNF627Q7L945 461 aa4.77□□□□□ -1.65
RAB3IP-209ENST00000547055 MRGPRGQ86SM5 289 aa4.77□□□□□ -1.65
RAB3IP-209ENST00000547055 LRRTM3Q86VH5 581 aa4.77□□□□□ -1.65
RAB3IP-209ENST00000547055 LDLRAD3Q86YD5 345 aa4.77□□□□□ -1.65
RAB3IP-209ENST00000547055 MDGA1Q8NFP4 955 aa4.77□□□□□ -1.65
RAB3IP-209ENST00000547055 MTFR1LQ9H019 292 aa4.77□□□□□ -1.65
RAB3IP-209ENST00000547055 PIF1Q9H611 641 aa4.77□□□□□ -1.65
RAB3IP-209ENST00000547055 NRDE2Q9H7Z3 1164 aa4.77□□□□□ -1.65
RAB3IP-209ENST00000547055 MYPNQ86TC9 1320 aa4.76□□□□□ -1.65
RAB3IP-209ENST00000547055 ST20-MTHFSA0A0A6YYL1 179 aa4.76□□□□□ -1.65
RAB3IP-209ENST00000547055 ELL2O00472 640 aaPredicted RBP4.76□□□□□ -1.65
RAB3IP-209ENST00000547055 STC2O76061 302 aa4.76□□□□□ -1.65
RAB3IP-209ENST00000547055 GAAP10253 952 aa4.76□□□□□ -1.65
RAB3IP-209ENST00000547055 POU3F2P20265 443 aaPredicted RBP4.76□□□□□ -1.65
RAB3IP-209ENST00000547055 PTGS2P35354 604 aa4.76□□□□□ -1.65
RAB3IP-209ENST00000547055 KPNA1P52294 538 aaPredicted RBP4.76□□□□□ -1.65
RAB3IP-209ENST00000547055 INHBEP58166 350 aa4.76□□□□□ -1.65
RAB3IP-209ENST00000547055 SART3Q15020 963 aaKnown RBP4.76□□□□□ -1.65
RAB3IP-209ENST00000547055 RABL3Q5HYI8 236 aa4.76□□□□□ -1.65
RAB3IP-209ENST00000547055 C16orf86Q6ZW13 317 aa4.76□□□□□ -1.65
RAB3IP-209ENST00000547055 SLC25A43Q8WUT9 341 aaPredicted RBP4.76□□□□□ -1.65
RAB3IP-209ENST00000547055 ST8SIA2Q92186 375 aa4.76□□□□□ -1.65
RAB3IP-209ENST00000547055 APPBP2Q92624 585 aa4.76□□□□□ -1.65
RAB3IP-209ENST00000547055 NINJ1Q92982 152 aa4.76□□□□□ -1.65
RAB3IP-209ENST00000547055 FERMT2Q96AC1 680 aa4.76□□□□□ -1.65
RAB3IP-209ENST00000547055 PRRX2Q99811 253 aa4.76□□□□□ -1.65
RAB3IP-209ENST00000547055 EPC1Q9H2F5 836 aa4.76□□□□□ -1.65
RAB3IP-209ENST00000547055 ING3Q9NXR8 418 aa4.76□□□□□ -1.65
RAB3IP-209ENST00000547055 GPRC5BQ9NZH0 403 aa4.76□□□□□ -1.65
RAB3IP-209ENST00000547055 USP36Q9P275 1121 aaKnown RBP4.76□□□□□ -1.65
RAB3IP-209ENST00000547055 MSRAQ9UJ68 235 aa4.76□□□□□ -1.65
RAB3IP-209ENST00000547055 PCDHB6Q9Y5E3 794 aa4.76□□□□□ -1.65
RAB3IP-209ENST00000547055 FAM83GA6ND36 823 aa4.75□□□□□ -1.65
RAB3IP-209ENST00000547055 NRP1O14786 923 aa4.75□□□□□ -1.65
RAB3IP-209ENST00000547055 ALDH1A2O94788 518 aa4.75□□□□□ -1.65
RAB3IP-209ENST00000547055 HK1P19367 917 aa4.75□□□□□ -1.65
RAB3IP-209ENST00000547055 TKFCQ3LXA3 575 aa4.75□□□□□ -1.65
RAB3IP-209ENST00000547055 C1QL3Q5VWW1 255 aa4.75□□□□□ -1.65
RAB3IP-209ENST00000547055 HTR3DQ70Z44 454 aa4.75□□□□□ -1.65
RAB3IP-209ENST00000547055 APBB1IPQ7Z5R6 666 aaPredicted RBP4.75□□□□□ -1.65
RAB3IP-209ENST00000547055 ULK2Q8IYT8 1036 aa4.75□□□□□ -1.65
RAB3IP-209ENST00000547055 UNC5BQ8IZJ1 945 aa4.75□□□□□ -1.65
RAB3IP-209ENST00000547055 ZNF276Q8N554 614 aa4.75□□□□□ -1.65
RAB3IP-209ENST00000547055 CDYL2Q8N8U2 506 aa4.75□□□□□ -1.65
RAB3IP-209ENST00000547055 HAS1Q92839 578 aa4.75□□□□□ -1.65
RAB3IP-209ENST00000547055 ZNF496Q96IT1 587 aaPredicted RBP4.75□□□□□ -1.65
RAB3IP-209ENST00000547055 FANCLQ9NW38 375 aa4.75□□□□□ -1.65
RAB3IP-209ENST00000547055 USP18Q9UMW8 372 aa4.75□□□□□ -1.65
RAB3IP-209ENST00000547055 TGM5O43548 720 aa4.74□□□□□ -1.65
RAB3IP-209ENST00000547055 RAMP2O60895 175 aa4.74□□□□□ -1.65
RAB3IP-209ENST00000547055 SCNN1BP51168 640 aa4.74□□□□□ -1.65
RAB3IP-209ENST00000547055 CD69Q07108 199 aa4.74□□□□□ -1.65
RAB3IP-209ENST00000547055 PCBP1Q15365 356 aaKnown RBP eCLIP4.74□□□□□ -1.65
RAB3IP-209ENST00000547055 FAM214AQ32MH5 1076 aa4.74□□□□□ -1.65
RAB3IP-209ENST00000547055 ZBTB41Q5SVQ8 909 aa4.74□□□□□ -1.65
RAB3IP-209ENST00000547055 NIM1KQ8IY84 436 aa4.74□□□□□ -1.65
RAB3IP-209ENST00000547055 PIK3C3Q8NEB9 887 aa4.74□□□□□ -1.65
RAB3IP-209ENST00000547055 OR5M3Q8NGP4 307 aa4.74□□□□□ -1.65
RAB3IP-209ENST00000547055 PPP1R14CQ8TAE6 165 aa4.74□□□□□ -1.65
RAB3IP-209ENST00000547055 GPR101Q96P66 508 aaPredicted RBP4.74□□□□□ -1.65
RAB3IP-209ENST00000547055 TTPALQ9BTX7 342 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms