RNA–Protein interactions for RNA: ENST00000543995.5

TNFRSF1A-216, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 1,531 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-216ENST00000543995 HERC4Q5GLZ8 1057 aaPredicted RBP15.98■□□□□ 0.15
TNFRSF1A-216ENST00000543995 FAM228AQ86W67 206 aa15.98■□□□□ 0.15
TNFRSF1A-216ENST00000543995 SFR1Q86XK3 245 aa15.98■□□□□ 0.15
TNFRSF1A-216ENST00000543995 FAM178BQ8IXR5 827 aa15.98■□□□□ 0.15
TNFRSF1A-216ENST00000543995 SEPT8Q92599 483 aa15.98■□□□□ 0.15
TNFRSF1A-216ENST00000543995 NFKBIZQ9BYH8 718 aa15.98■□□□□ 0.15
TNFRSF1A-216ENST00000543995 AGO3Q9H9G7 860 aaKnown RBP15.98■□□□□ 0.15
TNFRSF1A-216ENST00000543995 TET1Q8NFU7 2136 aa15.97■□□□□ 0.15
TNFRSF1A-216ENST00000543995 K7ENM7 598 aa15.97■□□□□ 0.15
TNFRSF1A-216ENST00000543995 SLC16A4O15374 487 aa15.97■□□□□ 0.15
TNFRSF1A-216ENST00000543995 ERLIN2O94905 339 aa15.97■□□□□ 0.15
TNFRSF1A-216ENST00000543995 CXCL10P02778 98 aa15.97■□□□□ 0.15
TNFRSF1A-216ENST00000543995 MCM4P33991 863 aa15.97■□□□□ 0.15
TNFRSF1A-216ENST00000543995 PLEKHG4Q58EX7 1191 aa15.97■□□□□ 0.15
TNFRSF1A-216ENST00000543995 CDCA2Q69YH5 1023 aaPredicted RBP15.97■□□□□ 0.15
TNFRSF1A-216ENST00000543995 CNNM4Q6P4Q7 775 aa15.97■□□□□ 0.15
TNFRSF1A-216ENST00000543995 CATSPER4Q7RTX7 472 aa15.97■□□□□ 0.15
TNFRSF1A-216ENST00000543995 IFNLR1Q8IU57 520 aaPredicted RBP15.97■□□□□ 0.15
TNFRSF1A-216ENST00000543995 DBF4BQ8NFT6 615 aa15.97■□□□□ 0.15
TNFRSF1A-216ENST00000543995 MINDY3Q9H8M7 445 aa15.97■□□□□ 0.15
TNFRSF1A-216ENST00000543995 MRPL44Q9H9J2 332 aaKnown RBP15.97■□□□□ 0.15
TNFRSF1A-216ENST00000543995 TBC1D7Q9P0N9 293 aa15.97■□□□□ 0.15
TNFRSF1A-216ENST00000543995 PADI3Q9ULW8 664 aa15.97■□□□□ 0.15
TNFRSF1A-216ENST00000543995 ST3GAL5Q9UNP4 418 aa15.97■□□□□ 0.15
TNFRSF1A-216ENST00000543995 ADGRA3Q8IWK6 1321 aa15.96■□□□□ 0.15
TNFRSF1A-216ENST00000543995 PRR29P0C7W0 189 aa15.96■□□□□ 0.15
TNFRSF1A-216ENST00000543995 EFNA5P52803 228 aa15.96■□□□□ 0.15
TNFRSF1A-216ENST00000543995 MBTD1Q05BQ5 628 aa15.96■□□□□ 0.15
TNFRSF1A-216ENST00000543995 COASYQ13057 564 aa15.96■□□□□ 0.15
TNFRSF1A-216ENST00000543995 PNOCQ13519 176 aa15.96■□□□□ 0.15
TNFRSF1A-216ENST00000543995 CNKSR3Q6P9H4 555 aa15.96■□□□□ 0.15
TNFRSF1A-216ENST00000543995 UNC13DQ70J99 1090 aa15.96■□□□□ 0.15
TNFRSF1A-216ENST00000543995 SPIRE2Q8WWL2 714 aa15.96■□□□□ 0.15
TNFRSF1A-216ENST00000543995 APBB2Q92870 758 aa15.96■□□□□ 0.15
TNFRSF1A-216ENST00000543995 CCDC47Q96A33 483 aaKnown RBP15.96■□□□□ 0.15
TNFRSF1A-216ENST00000543995 NTPCRQ9BSD7 190 aaKnown RBP15.96■□□□□ 0.15
TNFRSF1A-216ENST00000543995 SEL1LQ9UBV2 794 aa15.96■□□□□ 0.15
TNFRSF1A-216ENST00000543995 PVALEFA0A1B0GWK0 134 aa15.95■□□□□ 0.14
TNFRSF1A-216ENST00000543995 FRMD3A2A2Y4 597 aa15.95■□□□□ 0.14
TNFRSF1A-216ENST00000543995 H0YCG3 227 aa15.95■□□□□ 0.14
TNFRSF1A-216ENST00000543995 K7ERI5 159 aa15.95■□□□□ 0.14
TNFRSF1A-216ENST00000543995 FGBP02675 491 aa15.95■□□□□ 0.14
TNFRSF1A-216ENST00000543995 ACTN1P12814 892 aa15.95■□□□□ 0.14
TNFRSF1A-216ENST00000543995 NCKAP1LP55160 1127 aa15.95■□□□□ 0.14
TNFRSF1A-216ENST00000543995 NCBP1Q09161 790 aaKnown RBP15.95■□□□□ 0.14
TNFRSF1A-216ENST00000543995 DPYDQ12882 1025 aa15.95■□□□□ 0.14
TNFRSF1A-216ENST00000543995 IKBKEQ14164 716 aa15.95■□□□□ 0.14
TNFRSF1A-216ENST00000543995 MAPK6Q16659 721 aa15.95■□□□□ 0.14
TNFRSF1A-216ENST00000543995 PSRC1Q6PGN9 363 aaPredicted RBP15.95■□□□□ 0.14
TNFRSF1A-216ENST00000543995 HAUS6Q7Z4H7 955 aa15.95■□□□□ 0.14
TNFRSF1A-216ENST00000543995 SLC17A8Q8NDX2 589 aa15.95■□□□□ 0.14
TNFRSF1A-216ENST00000543995 UBE2OQ9C0C9 1292 aaKnown RBP15.95■□□□□ 0.14
TNFRSF1A-216ENST00000543995 ERVK-5Q9HDB9 667 aa15.95■□□□□ 0.14
TNFRSF1A-216ENST00000543995 EXOC1Q9NV70 894 aa15.95■□□□□ 0.14
TNFRSF1A-216ENST00000543995 PRMT7Q9NVM4 692 aaPredicted RBP15.95■□□□□ 0.14
TNFRSF1A-216ENST00000543995 ARHGAP28Q9P2N2 729 aa15.95■□□□□ 0.14
TNFRSF1A-216ENST00000543995 PHLPP2Q6ZVD8 1323 aa15.95■□□□□ 0.14
TNFRSF1A-216ENST00000543995 DENND3A2RUS2 1198 aa15.94■□□□□ 0.14
TNFRSF1A-216ENST00000543995 GCNT3O95395 438 aa15.94■□□□□ 0.14
TNFRSF1A-216ENST00000543995 MBD3O95983 291 aa15.94■□□□□ 0.14
TNFRSF1A-216ENST00000543995 PRKCBP05771 671 aa15.94■□□□□ 0.14
TNFRSF1A-216ENST00000543995 ZSCAN20P17040 1043 aaPredicted RBP15.94■□□□□ 0.14
TNFRSF1A-216ENST00000543995 NMT1P30419 496 aaKnown RBP15.94■□□□□ 0.14
TNFRSF1A-216ENST00000543995 EPHB4P54760 987 aa15.94■□□□□ 0.14
TNFRSF1A-216ENST00000543995 STRN3Q13033 797 aa15.94■□□□□ 0.14
TNFRSF1A-216ENST00000543995 PCBP1Q15365 356 aaKnown RBP eCLIP15.94■□□□□ 0.142e-7■■■□□ 16.3
TNFRSF1A-216ENST00000543995 TMEM132AQ24JP5 1023 aa15.94■□□□□ 0.14
TNFRSF1A-216ENST00000543995 ZNF365Q70YC5 407 aa15.94■□□□□ 0.14
TNFRSF1A-216ENST00000543995 OTOP2Q7RTS6 562 aa15.94■□□□□ 0.14
TNFRSF1A-216ENST00000543995 TMEM161BQ8NDZ6 487 aa15.94■□□□□ 0.14
TNFRSF1A-216ENST00000543995 GPT2Q8TD30 523 aa15.94■□□□□ 0.14
TNFRSF1A-216ENST00000543995 VWCEQ96DN2 955 aa15.94■□□□□ 0.14
TNFRSF1A-216ENST00000543995 OLFML3Q9NRN5 406 aa15.94■□□□□ 0.14
TNFRSF1A-216ENST00000543995 PIN4Q9Y237 131 aaKnown RBP15.94■□□□□ 0.14
TNFRSF1A-216ENST00000543995 RPN1P04843 607 aaKnown RBP15.94■□□□□ 0.14
TNFRSF1A-216ENST00000543995 MAPTP10636 758 aaKnown RBP15.94■□□□□ 0.14
TNFRSF1A-216ENST00000543995 PRPF4BQ13523 1007 aaKnown RBP15.94■□□□□ 0.14
TNFRSF1A-216ENST00000543995 CAMK4Q16566 473 aa15.94■□□□□ 0.14
TNFRSF1A-216ENST00000543995 KMT5BQ4FZB7 885 aa15.94■□□□□ 0.14
TNFRSF1A-216ENST00000543995 C16orf59Q7L2K0 433 aa15.94■□□□□ 0.14
TNFRSF1A-216ENST00000543995 ELOA2Q8IYF1 753 aaPredicted RBP15.94■□□□□ 0.14
TNFRSF1A-216ENST00000543995 ERCC4Q92889 916 aaPredicted RBP15.94■□□□□ 0.14
TNFRSF1A-216ENST00000543995 HPS3Q969F9 1004 aa15.94■□□□□ 0.14
TNFRSF1A-216ENST00000543995 PRIMPOLQ96LW4 560 aa15.94■□□□□ 0.14
TNFRSF1A-216ENST00000543995 GDF15Q99988 308 aa15.94■□□□□ 0.14
TNFRSF1A-216ENST00000543995 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.94■□□□□ 0.143e-6■■■□□ 18.5
TNFRSF1A-216ENST00000543995 FTHL17Q9BXU8 183 aa15.94■□□□□ 0.14
TNFRSF1A-216ENST00000543995 CCDC113Q9H0I3 377 aa15.94■□□□□ 0.14
TNFRSF1A-216ENST00000543995 TMEM134Q9H6X4 195 aa15.94■□□□□ 0.14
TNFRSF1A-216ENST00000543995 MICAL3Q7RTP6 2002 aa15.93■□□□□ 0.14
TNFRSF1A-216ENST00000543995 ZBBXA8MT70 800 aa15.93■□□□□ 0.14
TNFRSF1A-216ENST00000543995 KLRC4O43908 158 aa15.93■□□□□ 0.14
TNFRSF1A-216ENST00000543995 SMC2O95347 1197 aa15.93■□□□□ 0.14
TNFRSF1A-216ENST00000543995 SCP2P22307 547 aa15.93■□□□□ 0.14
TNFRSF1A-216ENST00000543995 ABCD1P33897 745 aa15.93■□□□□ 0.14
TNFRSF1A-216ENST00000543995 TCTN1Q2MV58 587 aa15.93■□□□□ 0.14
TNFRSF1A-216ENST00000543995 FAM26FQ5R3K3 315 aa15.93■□□□□ 0.14
TNFRSF1A-216ENST00000543995 TMEM240Q5SV17 173 aa15.93■□□□□ 0.14
TNFRSF1A-216ENST00000543995 STXBP4Q6ZWJ1 553 aa15.93■□□□□ 0.14
TNFRSF1A-216ENST00000543995 ZNF720Q7Z2F6 126 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms