RNA–Protein interactions for RNA: ENST00000543939.5

COPS7A-218, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 1,728 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-218ENST00000543939 SLC39A4Q6P5W5 647 aa21.66■■□□□ 1.06
COPS7A-218ENST00000543939 PDXDC1Q6P996 788 aa21.66■■□□□ 1.06
COPS7A-218ENST00000543939 GBP6Q6ZN66 633 aa21.66■■□□□ 1.06
COPS7A-218ENST00000543939 RRAGAQ7L523 313 aa21.66■■□□□ 1.06
COPS7A-218ENST00000543939 CACNA2D4Q7Z3S7 1137 aa21.66■■□□□ 1.06
COPS7A-218ENST00000543939 ABHD16BQ9H3Z7 469 aa21.66■■□□□ 1.06
COPS7A-218ENST00000543939 EPN1Q9Y6I3 576 aaPredicted RBP21.66■■□□□ 1.06
COPS7A-218ENST00000543939 LRRC53A6NM62 1247 aa21.66■■□□□ 1.06
COPS7A-218ENST00000543939 TUBB4AP04350 444 aa21.66■■□□□ 1.06
COPS7A-218ENST00000543939 SLC9A1P19634 815 aa21.66■■□□□ 1.06
COPS7A-218ENST00000543939 PON1P27169 355 aa21.66■■□□□ 1.06
COPS7A-218ENST00000543939 MCCD1P59942 119 aaPredicted RBP21.66■■□□□ 1.06
COPS7A-218ENST00000543939 MAP2K5Q13163 448 aa21.66■■□□□ 1.06
COPS7A-218ENST00000543939 BRDTQ58F21 947 aaPredicted RBP21.66■■□□□ 1.06
COPS7A-218ENST00000543939 INTS8Q75QN2 995 aaKnown RBP21.66■■□□□ 1.06
COPS7A-218ENST00000543939 RDH13Q8NBN7 331 aa21.66■■□□□ 1.06
COPS7A-218ENST00000543939 PPTC7Q8NI37 304 aa21.66■■□□□ 1.06
COPS7A-218ENST00000543939 CCDC102AQ96A19 550 aa21.66■■□□□ 1.06
COPS7A-218ENST00000543939 IGKV6-21A0A0C4DH24 114 aa21.65■■□□□ 1.06
COPS7A-218ENST00000543939 C11orf97A0A1B0GVM6 126 aaPredicted RBP21.65■■□□□ 1.06
COPS7A-218ENST00000543939 GAS2O43903 313 aaKnown RBP21.65■■□□□ 1.06
COPS7A-218ENST00000543939 NDUFA10O95299 355 aa21.65■■□□□ 1.06
COPS7A-218ENST00000543939 KRT13P13646 458 aa21.65■■□□□ 1.06
COPS7A-218ENST00000543939 FMO5P49326 533 aa21.65■■□□□ 1.06
COPS7A-218ENST00000543939 POLR2FP61218 127 aaKnown RBP21.65■■□□□ 1.06
COPS7A-218ENST00000543939 APBA1Q02410 837 aa21.65■■□□□ 1.06
COPS7A-218ENST00000543939 ACVR2BQ13705 512 aa21.65■■□□□ 1.06
COPS7A-218ENST00000543939 EXOC8Q8IYI6 725 aa21.65■■□□□ 1.06
COPS7A-218ENST00000543939 ZSWIM2Q8NEG5 633 aa21.65■■□□□ 1.06
COPS7A-218ENST00000543939 HBP1O60381 514 aa21.64■■□□□ 1.06
COPS7A-218ENST00000543939 DUSP28Q4G0W2 176 aa21.64■■□□□ 1.06
COPS7A-218ENST00000543939 IER5Q5VY09 327 aa21.64■■□□□ 1.06
COPS7A-218ENST00000543939 TRIM65Q6PJ69 517 aa21.64■■□□□ 1.06
COPS7A-218ENST00000543939 ACRBPQ8NEB7 543 aa21.64■■□□□ 1.06
COPS7A-218ENST00000543939 DEPTORQ8TB45 409 aa21.64■■□□□ 1.06
COPS7A-218ENST00000543939 AFG1LQ8WV93 481 aa21.64■■□□□ 1.06
COPS7A-218ENST00000543939 SYN2Q92777 582 aaPredicted RBP21.64■■□□□ 1.06
COPS7A-218ENST00000543939 NUCKS1Q9H1E3 243 aaKnown RBP21.64■■□□□ 1.06
COPS7A-218ENST00000543939 NLRC4Q9NPP4 1024 aa21.64■■□□□ 1.06
COPS7A-218ENST00000543939 ERAP1Q9NZ08 941 aa21.64■■□□□ 1.06
COPS7A-218ENST00000543939 LGALS2P05162 132 aa21.63■■□□□ 1.05
COPS7A-218ENST00000543939 HOXC6P09630 235 aa21.63■■□□□ 1.05
COPS7A-218ENST00000543939 TRIM49P0CI25 452 aa21.63■■□□□ 1.05
COPS7A-218ENST00000543939 TRIM49CP0CI26 452 aa21.63■■□□□ 1.05
COPS7A-218ENST00000543939 ACTN1P12814 892 aa21.63■■□□□ 1.05
COPS7A-218ENST00000543939 SMPD1P17405 629 aa21.63■■□□□ 1.05
COPS7A-218ENST00000543939 SREBF2Q12772 1141 aa21.63■■□□□ 1.05
COPS7A-218ENST00000543939 DRP2Q13474 957 aa21.63■■□□□ 1.05
COPS7A-218ENST00000543939 KLHDC7AQ5VTJ3 777 aa21.63■■□□□ 1.05
COPS7A-218ENST00000543939 IQSEC1Q6DN90 963 aa21.63■■□□□ 1.05
COPS7A-218ENST00000543939 CCDC170Q8IYT3 715 aa21.63■■□□□ 1.05
COPS7A-218ENST00000543939 USP6NLQ92738 828 aa21.63■■□□□ 1.05
COPS7A-218ENST00000543939 NHEJ1Q9H9Q4 299 aaPredicted RBP21.63■■□□□ 1.05
COPS7A-218ENST00000543939 GPBP1L1Q9HC44 474 aaPredicted RBP21.63■■□□□ 1.05
COPS7A-218ENST00000543939 ZFYVE28Q9HCC9 887 aa21.63■■□□□ 1.05
COPS7A-218ENST00000543939 SIX2Q9NPC8 291 aa21.63■■□□□ 1.05
COPS7A-218ENST00000543939 LRRIQ4A6NIV6 560 aa21.63■■□□□ 1.05
COPS7A-218ENST00000543939 KIF3CO14782 793 aa21.63■■□□□ 1.05
COPS7A-218ENST00000543939 GARTP22102 1010 aa21.63■■□□□ 1.05
COPS7A-218ENST00000543939 VAMP7P51809 220 aa21.63■■□□□ 1.05
COPS7A-218ENST00000543939 MKRN4PQ13434 485 aaPredicted RBP21.63■■□□□ 1.05
COPS7A-218ENST00000543939 CAPSQ13938 189 aa21.63■■□□□ 1.05
COPS7A-218ENST00000543939 TCP11Q8WWU5 503 aa21.63■■□□□ 1.05
COPS7A-218ENST00000543939 PRPF31Q8WWY3 499 aaKnown RBP21.63■■□□□ 1.05
COPS7A-218ENST00000543939 PRIMPOLQ96LW4 560 aa21.63■■□□□ 1.05
COPS7A-218ENST00000543939 FBXL18Q96ME1 805 aa21.63■■□□□ 1.05
COPS7A-218ENST00000543939 RNPEPQ9H4A4 650 aa21.63■■□□□ 1.05
COPS7A-218ENST00000543939 TMEM134Q9H6X4 195 aa21.63■■□□□ 1.05
COPS7A-218ENST00000543939 GCNT4Q9P109 453 aa21.63■■□□□ 1.05
COPS7A-218ENST00000543939 ZHX1Q9UKY1 873 aaPredicted RBP21.63■■□□□ 1.05
COPS7A-218ENST00000543939 TRPC6Q9Y210 931 aa21.63■■□□□ 1.05
COPS7A-218ENST00000543939 REXO2Q9Y3B8 237 aaKnown RBP21.63■■□□□ 1.05
COPS7A-218ENST00000543939 GOLGA8IPA6NC78 632 aa21.62■■□□□ 1.05
COPS7A-218ENST00000543939 GOLGA8JA6NMD2 632 aa21.62■■□□□ 1.05
COPS7A-218ENST00000543939 HNRNPDLO14979 420 aaKnown RBP21.62■■□□□ 1.05
COPS7A-218ENST00000543939 PIGRP01833 764 aa21.62■■□□□ 1.05
COPS7A-218ENST00000543939 ADRB2P07550 413 aa21.62■■□□□ 1.05
COPS7A-218ENST00000543939 ETF1P62495 437 aaKnown RBP21.62■■□□□ 1.05
COPS7A-218ENST00000543939 STRN3Q13033 797 aa21.62■■□□□ 1.05
COPS7A-218ENST00000543939 IRF5Q13568 498 aa21.62■■□□□ 1.05
COPS7A-218ENST00000543939 CBWD6Q4V339 395 aa21.62■■□□□ 1.05
COPS7A-218ENST00000543939 CBWD3Q5JTY5 395 aa21.62■■□□□ 1.05
COPS7A-218ENST00000543939 CBWD5Q5RIA9 395 aa21.62■■□□□ 1.05
COPS7A-218ENST00000543939 SMC1BQ8NDV3 1235 aa21.62■■□□□ 1.05
COPS7A-218ENST00000543939 HHIPL1Q96JK4 782 aa21.62■■□□□ 1.05
COPS7A-218ENST00000543939 JPH2Q9BR39 696 aaPredicted RBP21.62■■□□□ 1.05
COPS7A-218ENST00000543939 ARHGAP20Q9P2F6 1191 aa21.62■■□□□ 1.05
COPS7A-218ENST00000543939 FBXL5Q9UKA1 691 aa21.62■■□□□ 1.05
COPS7A-218ENST00000543939 ABT1Q9ULW3 272 aaKnown RBP21.62■■□□□ 1.05
COPS7A-218ENST00000543939 EVPLQ92817 2033 aa21.62■■□□□ 1.05
COPS7A-218ENST00000543939 MGAMO43451 1857 aa21.61■■□□□ 1.05
COPS7A-218ENST00000543939 ADCY3O60266 1144 aa21.61■■□□□ 1.05
COPS7A-218ENST00000543939 ECM2O94769 699 aaPredicted RBP21.61■■□□□ 1.05
COPS7A-218ENST00000543939 UCHL3P15374 230 aa21.61■■□□□ 1.05
COPS7A-218ENST00000543939 CYLC1P35663 651 aaPredicted RBP21.61■■□□□ 1.05
COPS7A-218ENST00000543939 TM4SF4P48230 202 aa21.61■■□□□ 1.05
COPS7A-218ENST00000543939 TERF1P54274 439 aa21.61■■□□□ 1.05
COPS7A-218ENST00000543939 DLG4P78352 724 aa21.61■■□□□ 1.05
COPS7A-218ENST00000543939 SNRNP35Q16560 246 aaKnown RBP21.61■■□□□ 1.05
COPS7A-218ENST00000543939 C1orf220Q5T0J3 134 aa21.61■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms