RNA–Protein interactions for RNA: ENST00000543898.5

ABCB1-210, Transcript of ATP binding cassette subfamily B member 1, humanhuman

TSL 5 BASIC

Gene ABCB1, Length 4,524 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCB1-210ENST00000543898 PNMA6FA0A0J9YX94 578 aa9.2□□□□□ -0.94
ABCB1-210ENST00000543898 EXOC1LA0A1B0GW35 172 aa9.2□□□□□ -0.94
ABCB1-210ENST00000543898 A8MUI8 341 aa9.2□□□□□ -0.94
ABCB1-210ENST00000543898 NOL4O94818 638 aa9.2□□□□□ -0.94
ABCB1-210ENST00000543898 FXR2P51116 673 aaKnown RBP eCLIP9.2□□□□□ -0.94
ABCB1-210ENST00000543898 ASPRV1Q53RT3 343 aa9.2□□□□□ -0.94
ABCB1-210ENST00000543898 NT5DC3Q86UY8 548 aa9.2□□□□□ -0.94
ABCB1-210ENST00000543898 ZC3H18Q86VM9 953 aaKnown RBP9.2□□□□□ -0.94
ABCB1-210ENST00000543898 ERICH1Q86X53 443 aa9.2□□□□□ -0.94
ABCB1-210ENST00000543898 DAGLBQ8NCG7 672 aa9.2□□□□□ -0.94
ABCB1-210ENST00000543898 SMC6Q96SB8 1091 aa9.2□□□□□ -0.94
ABCB1-210ENST00000543898 FGFBP2Q9BYJ0 223 aa9.2□□□□□ -0.94
ABCB1-210ENST00000543898 PNMA3Q9UL41 463 aa9.2□□□□□ -0.94
ABCB1-210ENST00000543898 NR2E1Q9Y466 385 aa9.2□□□□□ -0.94
ABCB1-210ENST00000543898 ASAP2O43150 1006 aa9.2□□□□□ -0.94
ABCB1-210ENST00000543898 LCA5LO95447 670 aa9.2□□□□□ -0.94
ABCB1-210ENST00000543898 TARSP26639 723 aaKnown RBP9.2□□□□□ -0.94
ABCB1-210ENST00000543898 CCNHP51946 323 aaPredicted RBP9.2□□□□□ -0.94
ABCB1-210ENST00000543898 SLC8A3P57103 927 aa9.2□□□□□ -0.94
ABCB1-210ENST00000543898 CCDC62Q6P9F0 684 aa9.2□□□□□ -0.94
ABCB1-210ENST00000543898 PPP1R21Q6ZMI0 780 aa9.2□□□□□ -0.94
ABCB1-210ENST00000543898 REEP2Q9BRK0 252 aa9.2□□□□□ -0.94
ABCB1-210ENST00000543898 DIS3Q9Y2L1 958 aaKnown RBP9.2□□□□□ -0.94
ABCB1-210ENST00000543898 NALCNQ8IZF0 1738 aa9.2□□□□□ -0.94
ABCB1-210ENST00000543898 DDX3XO00571 662 aaKnown RBP eCLIP9.2□□□□□ -0.942e-6■■■■■ 31.8
ABCB1-210ENST00000543898 PHF2O75151 1096 aa9.2□□□□□ -0.94
ABCB1-210ENST00000543898 AKAP3O75969 853 aa9.2□□□□□ -0.94
ABCB1-210ENST00000543898 GSTA1P08263 222 aa9.2□□□□□ -0.94
ABCB1-210ENST00000543898 TROVE2P10155 538 aaKnown RBP eCLIP9.2□□□□□ -0.94
ABCB1-210ENST00000543898 FLT1P17948 1338 aa9.2□□□□□ -0.94
ABCB1-210ENST00000543898 HOXA13P31271 388 aaPredicted RBP9.2□□□□□ -0.94
ABCB1-210ENST00000543898 CTCFP49711 727 aaPredicted RBP9.2□□□□□ -0.94
ABCB1-210ENST00000543898 HSPA2P54652 639 aa9.2□□□□□ -0.94
ABCB1-210ENST00000543898 RWDD2BP57060 319 aa9.2□□□□□ -0.94
ABCB1-210ENST00000543898 GPC5P78333 572 aa9.2□□□□□ -0.94
ABCB1-210ENST00000543898 SLC30A9Q6PML9 568 aa9.2□□□□□ -0.94
ABCB1-210ENST00000543898 C6orf89Q6UWU4 347 aa9.2□□□□□ -0.94
ABCB1-210ENST00000543898 ZNF572Q7Z3I7 529 aaPredicted RBP9.2□□□□□ -0.94
ABCB1-210ENST00000543898 KIAA0825Q8IV33 1275 aa9.2□□□□□ -0.94
ABCB1-210ENST00000543898 DTX3LQ8TDB6 740 aa9.2□□□□□ -0.94
ABCB1-210ENST00000543898 ITFG2Q969R8 447 aa9.2□□□□□ -0.94
ABCB1-210ENST00000543898 ZNF148Q9UQR1 794 aa9.2□□□□□ -0.94
ABCB1-210ENST00000543898 RSPH10B2B2RC85 870 aa9.19□□□□□ -0.94
ABCB1-210ENST00000543898 CLDN3O15551 220 aa9.19□□□□□ -0.94
ABCB1-210ENST00000543898 RSPH10BP0C881 870 aa9.19□□□□□ -0.94
ABCB1-210ENST00000543898 ATF7P17544 494 aaPredicted RBP9.19□□□□□ -0.94
ABCB1-210ENST00000543898 CYP11B2P19099 503 aa9.19□□□□□ -0.94
ABCB1-210ENST00000543898 GCLMP48507 274 aa9.19□□□□□ -0.94
ABCB1-210ENST00000543898 KRT17Q04695 432 aa9.19□□□□□ -0.94
ABCB1-210ENST00000543898 ZC2HC1CQ53FD0 456 aaPredicted RBP9.19□□□□□ -0.94
ABCB1-210ENST00000543898 ADGRF4Q8IZF3 695 aa9.19□□□□□ -0.94
ABCB1-210ENST00000543898 BICD1Q96G01 975 aa9.19□□□□□ -0.94
ABCB1-210ENST00000543898 BTBD6Q96KE9 485 aa9.19□□□□□ -0.94
ABCB1-210ENST00000543898 TYW1Q9NV66 732 aaKnown RBP9.19□□□□□ -0.94
ABCB1-210ENST00000543898 RGL1Q9NZL6 768 aa9.19□□□□□ -0.94
ABCB1-210ENST00000543898 SCOCQ9UIL1 159 aa9.19□□□□□ -0.94
ABCB1-210ENST00000543898 HAO1Q9UJM8 370 aa9.19□□□□□ -0.94
ABCB1-210ENST00000543898 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.19□□□□□ -0.94
ABCB1-210ENST00000543898 A0A0G2JND7 137 aa9.19□□□□□ -0.94
ABCB1-210ENST00000543898 MIF4GDA9UHW6 222 aaKnown RBP9.19□□□□□ -0.94
ABCB1-210ENST00000543898 COMTP21964 271 aa9.19□□□□□ -0.94
ABCB1-210ENST00000543898 MAPK4P31152 587 aa9.19□□□□□ -0.94
ABCB1-210ENST00000543898 GTF2IP78347 998 aa9.19□□□□□ -0.94
ABCB1-210ENST00000543898 DNAJC3Q13217 504 aa9.19□□□□□ -0.94
ABCB1-210ENST00000543898 BZW1Q7L1Q6 419 aaKnown RBP9.19□□□□□ -0.94
ABCB1-210ENST00000543898 TXNRD3Q86VQ6 643 aa9.19□□□□□ -0.94
ABCB1-210ENST00000543898 COL23A1Q86Y22 540 aaPredicted RBP9.19□□□□□ -0.94
ABCB1-210ENST00000543898 PPP1R14CQ8TAE6 165 aa9.19□□□□□ -0.94
ABCB1-210ENST00000543898 ANO3Q9BYT9 981 aa9.19□□□□□ -0.94
ABCB1-210ENST00000543898 KDM3BQ7LBC6 1761 aa9.19□□□□□ -0.94
ABCB1-210ENST00000543898 NFAT5O94916 1531 aa9.19□□□□□ -0.94
ABCB1-210ENST00000543898 FOXO6A8MYZ6 492 aa9.19□□□□□ -0.94
ABCB1-210ENST00000543898 K7ENM7 598 aa9.19□□□□□ -0.94
ABCB1-210ENST00000543898 GNPATO15228 680 aa9.19□□□□□ -0.94
ABCB1-210ENST00000543898 RPL21P46778 160 aaKnown RBP9.19□□□□□ -0.94
ABCB1-210ENST00000543898 TMEM154Q6P9G4 183 aa9.19□□□□□ -0.94
ABCB1-210ENST00000543898 RNF168Q8IYW5 571 aaPredicted RBP9.19□□□□□ -0.94
ABCB1-210ENST00000543898 PDCD7Q8N8D1 485 aaKnown RBP9.19□□□□□ -0.94
ABCB1-210ENST00000543898 NEDD1Q8NHV4 660 aa9.19□□□□□ -0.94
ABCB1-210ENST00000543898 KIFAP3Q92845 792 aa9.19□□□□□ -0.94
ABCB1-210ENST00000543898 NAF1Q96HR8 494 aaKnown RBP9.19□□□□□ -0.94
ABCB1-210ENST00000543898 CARD9Q9H257 536 aa9.19□□□□□ -0.94
ABCB1-210ENST00000543898 HOMER2Q9NSB8 354 aa9.19□□□□□ -0.94
ABCB1-210ENST00000543898 TTC7AQ9ULT0 858 aaPredicted RBP9.19□□□□□ -0.94
ABCB1-210ENST00000543898 C1orf167Q5SNV9 1468 aa9.19□□□□□ -0.94
ABCB1-210ENST00000543898 RGPD2P0DJD1 1756 aa9.19□□□□□ -0.94
ABCB1-210ENST00000543898 GOLGA8IPA6NC78 632 aa9.19□□□□□ -0.94
ABCB1-210ENST00000543898 GOLGA8JA6NMD2 632 aa9.19□□□□□ -0.94
ABCB1-210ENST00000543898 TXNDC9O14530 226 aa9.19□□□□□ -0.94
ABCB1-210ENST00000543898 RFC4P35249 363 aa9.19□□□□□ -0.94
ABCB1-210ENST00000543898 SCNN1DP51172 638 aa9.19□□□□□ -0.94
ABCB1-210ENST00000543898 PTENP60484 403 aa9.19□□□□□ -0.94
ABCB1-210ENST00000543898 ASTE1Q2TB18 679 aaPredicted RBP9.19□□□□□ -0.94
ABCB1-210ENST00000543898 EDRF1Q3B7T1 1238 aa9.19□□□□□ -0.94
ABCB1-210ENST00000543898 ANKRD20A2Q5SQ80 823 aa9.19□□□□□ -0.94
ABCB1-210ENST00000543898 THEMIS2Q5TEJ8 643 aa9.19□□□□□ -0.94
ABCB1-210ENST00000543898 ANKRD20A1Q5TYW2 823 aa9.19□□□□□ -0.94
ABCB1-210ENST00000543898 CFAP61Q8NHU2 1237 aa9.19□□□□□ -0.94
ABCB1-210ENST00000543898 INTS2Q9H0H0 1204 aaKnown RBP9.19□□□□□ -0.94
ABCB1-210ENST00000543898 ALG13Q9NP73 1137 aaKnown RBP9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms