RNA–Protein interactions for RNA: ENST00000543205.1

CLIP1-217, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,018 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-217ENST00000543205 HOXA13P31271 388 aaPredicted RBP5.79□□□□□ -1.48
CLIP1-217ENST00000543205 IRS1P35568 1242 aa5.79□□□□□ -1.48
CLIP1-217ENST00000543205 HSD17B4P51659 736 aa5.79□□□□□ -1.48
CLIP1-217ENST00000543205 ADCY7P51828 1080 aa5.79□□□□□ -1.48
CLIP1-217ENST00000543205 MRPL12P52815 198 aaKnown RBP5.79□□□□□ -1.48
CLIP1-217ENST00000543205 UBXN2AP68543 259 aa5.79□□□□□ -1.48
CLIP1-217ENST00000543205 MAPRE1Q15691 268 aaKnown RBP5.79□□□□□ -1.48
CLIP1-217ENST00000543205 CCL14Q16627 93 aa5.79□□□□□ -1.48
CLIP1-217ENST00000543205 RNFT1Q5M7Z0 435 aa5.79□□□□□ -1.48
CLIP1-217ENST00000543205 AXDND1Q5T1B0 1012 aaPredicted RBP5.79□□□□□ -1.48
CLIP1-217ENST00000543205 OLFML2BQ68BL8 750 aa5.79□□□□□ -1.48
CLIP1-217ENST00000543205 SLC30A10Q6XR72 485 aa5.79□□□□□ -1.48
CLIP1-217ENST00000543205 HSCBQ8IWL3 235 aa5.79□□□□□ -1.48
CLIP1-217ENST00000543205 PAF1Q8N7H5 531 aa5.79□□□□□ -1.48
CLIP1-217ENST00000543205 PDILTQ8N807 584 aa5.79□□□□□ -1.48
CLIP1-217ENST00000543205 NSUN7Q8NE18 718 aaKnown RBP5.79□□□□□ -1.48
CLIP1-217ENST00000543205 CCDC148Q8NFR7 591 aa5.79□□□□□ -1.48
CLIP1-217ENST00000543205 ENOX1Q8TC92 643 aaKnown RBP5.79□□□□□ -1.48
CLIP1-217ENST00000543205 SYTL5Q8TDW5 730 aaPredicted RBP5.79□□□□□ -1.48
CLIP1-217ENST00000543205 TBC1D5Q92609 795 aa5.79□□□□□ -1.48
CLIP1-217ENST00000543205 MAML3Q96JK9 1138 aa5.79□□□□□ -1.48
CLIP1-217ENST00000543205 GLT8D2Q9H1C3 349 aa5.79□□□□□ -1.48
CLIP1-217ENST00000543205 ZHX3Q9H4I2 956 aa5.79□□□□□ -1.48
CLIP1-217ENST00000543205 C6orf50Q9HD87 102 aa5.79□□□□□ -1.48
CLIP1-217ENST00000543205 SH3GLB2Q9NR46 395 aa5.79□□□□□ -1.48
CLIP1-217ENST00000543205 ADD3Q9UEY8 706 aaKnown RBP5.79□□□□□ -1.48
CLIP1-217ENST00000543205 STK36Q9NRP7 1315 aa5.79□□□□□ -1.48
CLIP1-217ENST00000543205 ASB14A6NK59 587 aa5.78□□□□□ -1.48
CLIP1-217ENST00000543205 ZSWIM8A7E2V4 1837 aa5.78□□□□□ -1.48
CLIP1-217ENST00000543205 MGAMO43451 1857 aa5.78□□□□□ -1.48
CLIP1-217ENST00000543205 JAK2O60674 1132 aa5.78□□□□□ -1.48
CLIP1-217ENST00000543205 KATNA1O75449 491 aa5.78□□□□□ -1.48
CLIP1-217ENST00000543205 GNA11P29992 359 aa5.78□□□□□ -1.48
CLIP1-217ENST00000543205 NLRP5P59047 1200 aa5.78□□□□□ -1.48
CLIP1-217ENST00000543205 HMGN5P82970 282 aaKnown RBP5.78□□□□□ -1.48
CLIP1-217ENST00000543205 ST3GAL1Q11201 340 aa5.78□□□□□ -1.48
CLIP1-217ENST00000543205 TRIM29Q14134 588 aa5.78□□□□□ -1.48
CLIP1-217ENST00000543205 TMEM95Q3KNT9 176 aa5.78□□□□□ -1.48
CLIP1-217ENST00000543205 ARHGEF16Q5VV41 709 aa5.78□□□□□ -1.48
CLIP1-217ENST00000543205 PDE12Q6L8Q7 609 aaKnown RBP5.78□□□□□ -1.48
CLIP1-217ENST00000543205 ERAP2Q6P179 960 aa5.78□□□□□ -1.48
CLIP1-217ENST00000543205 USP17L6PQ6QN14 398 aa5.78□□□□□ -1.48
CLIP1-217ENST00000543205 FCHSD1Q86WN1 690 aa5.78□□□□□ -1.48
CLIP1-217ENST00000543205 SDR16C5Q8N3Y7 309 aa5.78□□□□□ -1.48
CLIP1-217ENST00000543205 MSL3Q8N5Y2 521 aaKnown RBP5.78□□□□□ -1.48
CLIP1-217ENST00000543205 FAM169BQ8N8A8 192 aa5.78□□□□□ -1.48
CLIP1-217ENST00000543205 FAM133AQ8N9E0 248 aa5.78□□□□□ -1.48
CLIP1-217ENST00000543205 FAM184AQ8NB25 1140 aa5.78□□□□□ -1.48
CLIP1-217ENST00000543205 DNERQ8NFT8 737 aa5.78□□□□□ -1.48
CLIP1-217ENST00000543205 BICD2Q8TD16 824 aa5.78□□□□□ -1.48
CLIP1-217ENST00000543205 NSUN6Q8TEA1 469 aaKnown RBP5.78□□□□□ -1.48
CLIP1-217ENST00000543205 TRIB2Q92519 343 aa5.78□□□□□ -1.48
CLIP1-217ENST00000543205 E2F7Q96AV8 911 aa5.78□□□□□ -1.48
CLIP1-217ENST00000543205 EAF1Q96JC9 268 aaPredicted RBP5.78□□□□□ -1.48
CLIP1-217ENST00000543205 CNTNAP3BQ96NU0 1288 aa5.78□□□□□ -1.48
CLIP1-217ENST00000543205 ALG1Q9BT22 464 aa5.78□□□□□ -1.48
CLIP1-217ENST00000543205 CNTNAP3Q9BZ76 1288 aa5.78□□□□□ -1.48
CLIP1-217ENST00000543205 RIC8AQ9NPQ8 531 aa5.78□□□□□ -1.48
CLIP1-217ENST00000543205 FLRT1Q9NZU1 646 aa5.78□□□□□ -1.48
CLIP1-217ENST00000543205 VPS54Q9P1Q0 977 aa5.78□□□□□ -1.48
CLIP1-217ENST00000543205 PRKAG3Q9UGI9 489 aa5.78□□□□□ -1.48
CLIP1-217ENST00000543205 CNPY2Q9Y2B0 182 aa5.78□□□□□ -1.48
CLIP1-217ENST00000543205 ZSCAN21Q9Y5A6 473 aaPredicted RBP5.78□□□□□ -1.48
CLIP1-217ENST00000543205 BAZ2BQ9UIF8 2168 aaKnown RBP5.78□□□□□ -1.48
CLIP1-217ENST00000543205 SYNGAP1Q96PV0 1343 aa5.77□□□□□ -1.49
CLIP1-217ENST00000543205 ESYT2A0FGR8 921 aa5.77□□□□□ -1.49
CLIP1-217ENST00000543205 SPDYE3A6NKU9 549 aa5.77□□□□□ -1.49
CLIP1-217ENST00000543205 C2CD2LO14523 706 aa5.77□□□□□ -1.49
CLIP1-217ENST00000543205 MEIS2O14770 477 aa5.77□□□□□ -1.49
CLIP1-217ENST00000543205 AKAP10O43572 662 aa5.77□□□□□ -1.49
CLIP1-217ENST00000543205 DTNBO60941 627 aa5.77□□□□□ -1.49
CLIP1-217ENST00000543205 ASMTLO95671 621 aa5.77□□□□□ -1.49
CLIP1-217ENST00000543205 TARSP26639 723 aaKnown RBP5.77□□□□□ -1.49
CLIP1-217ENST00000543205 CYP2C19P33261 490 aa5.77□□□□□ -1.49
CLIP1-217ENST00000543205 MAP2K3P46734 347 aa5.77□□□□□ -1.49
CLIP1-217ENST00000543205 ALDH5A1P51649 535 aaPredicted RBP5.77□□□□□ -1.49
CLIP1-217ENST00000543205 GHRHRQ02643 423 aa5.77□□□□□ -1.49
CLIP1-217ENST00000543205 UBE2SQ16763 222 aa5.77□□□□□ -1.49
CLIP1-217ENST00000543205 HABP4Q5JVS0 413 aaKnown RBP5.77□□□□□ -1.49
CLIP1-217ENST00000543205 ARMCX2Q7L311 632 aa5.77□□□□□ -1.49
CLIP1-217ENST00000543205 MYRIPQ8NFW9 859 aa5.77□□□□□ -1.49
CLIP1-217ENST00000543205 SNX21Q969T3 373 aa5.77□□□□□ -1.49
CLIP1-217ENST00000543205 AIFM3Q96NN9 605 aa5.77□□□□□ -1.49
CLIP1-217ENST00000543205 TAAR1Q96RJ0 339 aa5.77□□□□□ -1.49
CLIP1-217ENST00000543205 RMDN3Q96TC7 470 aa5.77□□□□□ -1.49
CLIP1-217ENST00000543205 ZMYND12Q9H0C1 365 aa5.77□□□□□ -1.49
CLIP1-217ENST00000543205 EHMT1Q9H9B1 1298 aa5.77□□□□□ -1.49
CLIP1-217ENST00000543205 KIF3AQ9Y496 699 aa5.77□□□□□ -1.49
CLIP1-217ENST00000543205 SMAD7O15105 426 aaKnown RBP5.77□□□□□ -1.49
CLIP1-217ENST00000543205 FDPSP14324 419 aaKnown RBP5.77□□□□□ -1.49
CLIP1-217ENST00000543205 EIF2AK2P19525 551 aaKnown RBP5.77□□□□□ -1.49
CLIP1-217ENST00000543205 MAN1A1P33908 653 aa5.77□□□□□ -1.49
CLIP1-217ENST00000543205 SOX9P48436 509 aa5.77□□□□□ -1.49
CLIP1-217ENST00000543205 CACNB2Q08289 660 aaPredicted RBP5.77□□□□□ -1.49
CLIP1-217ENST00000543205 TBC1D8BQ0IIM8 1120 aa5.77□□□□□ -1.49
CLIP1-217ENST00000543205 GRAMD1BQ3KR37 738 aa5.77□□□□□ -1.49
CLIP1-217ENST00000543205 ACBD5Q5T8D3 534 aaPredicted RBP5.77□□□□□ -1.49
CLIP1-217ENST00000543205 ICE2Q659A1 982 aa5.77□□□□□ -1.49
CLIP1-217ENST00000543205 MCTP2Q6DN12 878 aa5.77□□□□□ -1.49
CLIP1-217ENST00000543205 GALNT17Q6IS24 598 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms