RNA–Protein interactions for RNA: ENST00000543016.1

DDX55-210, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 329 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-210ENST00000543016 PLEKHG4Q58EX7 1191 aa13.44□□□□□ -0.26
DDX55-210ENST00000543016 PSRC1Q6PGN9 363 aaPredicted RBP13.44□□□□□ -0.26
DDX55-210ENST00000543016 STXBP4Q6ZWJ1 553 aa13.44□□□□□ -0.26
DDX55-210ENST00000543016 KSR1Q8IVT5 923 aa13.44□□□□□ -0.26
DDX55-210ENST00000543016 BADQ92934 168 aa13.44□□□□□ -0.26
DDX55-210ENST00000543016 OSMRQ99650 979 aa13.44□□□□□ -0.26
DDX55-210ENST00000543016 KMT5AQ9NQR1 393 aa13.44□□□□□ -0.26
DDX55-210ENST00000543016 PANK4Q9NVE7 773 aa13.44□□□□□ -0.26
DDX55-210ENST00000543016 PRMT7Q9NVM4 692 aaPredicted RBP13.44□□□□□ -0.26
DDX55-210ENST00000543016 DACT1Q9NYF0 836 aa13.44□□□□□ -0.26
DDX55-210ENST00000543016 PDE4DIPQ5VU43 2346 aa13.44□□□□□ -0.26
DDX55-210ENST00000543016 NPHP3-ACAD11A0A0J9YXS1 232 aa13.43□□□□□ -0.26
DDX55-210ENST00000543016 K7ERI5 159 aa13.43□□□□□ -0.26
DDX55-210ENST00000543016 NBNO60934 754 aa13.43□□□□□ -0.26
DDX55-210ENST00000543016 BAIAP3O94812 1187 aa13.43□□□□□ -0.26
DDX55-210ENST00000543016 IDEP14735 1019 aa13.43□□□□□ -0.26
DDX55-210ENST00000543016 CSF2RAP15509 400 aa13.43□□□□□ -0.26
DDX55-210ENST00000543016 SYN1P17600 705 aa13.43□□□□□ -0.26
DDX55-210ENST00000543016 AXLP30530 894 aa13.43□□□□□ -0.26
DDX55-210ENST00000543016 NCKAP1LP55160 1127 aa13.43□□□□□ -0.26
DDX55-210ENST00000543016 RAD51AP2Q09MP3 1159 aa13.43□□□□□ -0.26
DDX55-210ENST00000543016 PAK2Q13177 524 aa13.43□□□□□ -0.26
DDX55-210ENST00000543016 PSMD2Q13200 908 aa13.43□□□□□ -0.26
DDX55-210ENST00000543016 POSTNQ15063 836 aa13.43□□□□□ -0.26
DDX55-210ENST00000543016 MAPK6Q16659 721 aa13.43□□□□□ -0.26
DDX55-210ENST00000543016 HERC4Q5GLZ8 1057 aaPredicted RBP13.43□□□□□ -0.26
DDX55-210ENST00000543016 CNKSR3Q6P9H4 555 aa13.43□□□□□ -0.26
DDX55-210ENST00000543016 FAM178BQ8IXR5 827 aa13.43□□□□□ -0.26
DDX55-210ENST00000543016 BSNDQ8WZ55 320 aa13.43□□□□□ -0.26
DDX55-210ENST00000543016 HVCN1Q96D96 273 aa13.43□□□□□ -0.26
DDX55-210ENST00000543016 CCDC51Q96ER9 411 aa13.43□□□□□ -0.26
DDX55-210ENST00000543016 SCLYQ96I15 445 aa13.43□□□□□ -0.26
DDX55-210ENST00000543016 IFIH1Q9BYX4 1025 aaKnown RBP13.43□□□□□ -0.26
DDX55-210ENST00000543016 MTIF3Q9H2K0 278 aaKnown RBP13.43□□□□□ -0.26
DDX55-210ENST00000543016 FZD8Q9H461 694 aa13.43□□□□□ -0.26
DDX55-210ENST00000543016 ZHX3Q9H4I2 956 aa13.43□□□□□ -0.26
DDX55-210ENST00000543016 CDHR5Q9HBB8 845 aa13.43□□□□□ -0.26
DDX55-210ENST00000543016 RMND1Q9NWS8 449 aa13.43□□□□□ -0.26
DDX55-210ENST00000543016 ARHGAP28Q9P2N2 729 aa13.43□□□□□ -0.26
DDX55-210ENST00000543016 ABHD14A-ACY1A0A1B0GW23 586 aa13.42□□□□□ -0.26
DDX55-210ENST00000543016 SFI1A8K8P3 1242 aa13.42□□□□□ -0.26
DDX55-210ENST00000543016 INO80B-WBP1J3KQ70 363 aa13.42□□□□□ -0.26
DDX55-210ENST00000543016 ACKR2O00590 384 aa13.42□□□□□ -0.26
DDX55-210ENST00000543016 ERLIN2O94905 339 aa13.42□□□□□ -0.26
DDX55-210ENST00000543016 GHRP10912 638 aa13.42□□□□□ -0.26
DDX55-210ENST00000543016 MDM2Q00987 491 aaPredicted RBP13.42□□□□□ -0.26
DDX55-210ENST00000543016 MBTD1Q05BQ5 628 aa13.42□□□□□ -0.26
DDX55-210ENST00000543016 DPYDQ12882 1025 aa13.42□□□□□ -0.26
DDX55-210ENST00000543016 CUL4BQ13620 913 aa13.42□□□□□ -0.26
DDX55-210ENST00000543016 IKBKEQ14164 716 aa13.42□□□□□ -0.26
DDX55-210ENST00000543016 KCNB1Q14721 858 aa13.42□□□□□ -0.26
DDX55-210ENST00000543016 GPNMBQ14956 572 aa13.42□□□□□ -0.26
DDX55-210ENST00000543016 CATSPER4Q7RTX7 472 aa13.42□□□□□ -0.26
DDX55-210ENST00000543016 ZNF720Q7Z2F6 126 aa13.42□□□□□ -0.26
DDX55-210ENST00000543016 TMEM161BQ8NDZ6 487 aa13.42□□□□□ -0.26
DDX55-210ENST00000543016 TMEM40Q8WWA1 233 aa13.42□□□□□ -0.26
DDX55-210ENST00000543016 STAMQ92783 540 aa13.42□□□□□ -0.26
DDX55-210ENST00000543016 GSDMAQ96QA5 445 aa13.42□□□□□ -0.26
DDX55-210ENST00000543016 ERVK-5Q9HDB9 667 aa13.42□□□□□ -0.26
DDX55-210ENST00000543016 PADI3Q9ULW8 664 aa13.42□□□□□ -0.26
DDX55-210ENST00000543016 ST3GAL5Q9UNP4 418 aa13.42□□□□□ -0.26
DDX55-210ENST00000543016 NOC2LQ9Y3T9 749 aaKnown RBP13.42□□□□□ -0.26
DDX55-210ENST00000543016 PCDHB13Q9Y5F0 798 aa13.42□□□□□ -0.26
DDX55-210ENST00000543016 H0YGN5 161 aa13.41□□□□□ -0.26
DDX55-210ENST00000543016 KIF20AO95235 890 aa13.41□□□□□ -0.26
DDX55-210ENST00000543016 FGBP02675 491 aa13.41□□□□□ -0.26
DDX55-210ENST00000543016 ZSCAN20P17040 1043 aaPredicted RBP13.41□□□□□ -0.26
DDX55-210ENST00000543016 CD52P31358 61 aa13.41□□□□□ -0.26
DDX55-210ENST00000543016 BMP8BP34820 402 aa13.41□□□□□ -0.26
DDX55-210ENST00000543016 GTF2BQ00403 316 aa13.41□□□□□ -0.26
DDX55-210ENST00000543016 EHHADHQ08426 723 aa13.41□□□□□ -0.26
DDX55-210ENST00000543016 NFX1Q12986 1120 aaKnown RBP13.41□□□□□ -0.26
DDX55-210ENST00000543016 STRN3Q13033 797 aa13.41□□□□□ -0.26
DDX55-210ENST00000543016 COASYQ13057 564 aa13.41□□□□□ -0.26
DDX55-210ENST00000543016 HAUS6Q7Z4H7 955 aa13.41□□□□□ -0.26
DDX55-210ENST00000543016 APBB1IPQ7Z5R6 666 aaPredicted RBP13.41□□□□□ -0.26
DDX55-210ENST00000543016 FAM228AQ86W67 206 aa13.41□□□□□ -0.26
DDX55-210ENST00000543016 SFR1Q86XK3 245 aa13.41□□□□□ -0.26
DDX55-210ENST00000543016 DBF4BQ8NFT6 615 aa13.41□□□□□ -0.26
DDX55-210ENST00000543016 PPP1R16BQ96T49 567 aa13.41□□□□□ -0.26
DDX55-210ENST00000543016 TRAIPQ9BWF2 469 aa13.41□□□□□ -0.26
DDX55-210ENST00000543016 CCDC113Q9H0I3 377 aa13.41□□□□□ -0.26
DDX55-210ENST00000543016 BLZF1Q9H2G9 400 aa13.41□□□□□ -0.26
DDX55-210ENST00000543016 AGO3Q9H9G7 860 aaKnown RBP13.41□□□□□ -0.26
DDX55-210ENST00000543016 MRPL44Q9H9J2 332 aaKnown RBP13.41□□□□□ -0.26
DDX55-210ENST00000543016 C1orf112Q9NSG2 853 aa13.41□□□□□ -0.26
DDX55-210ENST00000543016 EXOC1Q9NV70 894 aa13.41□□□□□ -0.26
DDX55-210ENST00000543016 EXOC7Q9UPT5 735 aa13.41□□□□□ -0.26
DDX55-210ENST00000543016 CEP290O15078 2479 aa13.4□□□□□ -0.26
DDX55-210ENST00000543016 DENND3A2RUS2 1198 aa13.4□□□□□ -0.26
DDX55-210ENST00000543016 K7ENM7 598 aa13.4□□□□□ -0.26
DDX55-210ENST00000543016 SLC16A4O15374 487 aa13.4□□□□□ -0.26
DDX55-210ENST00000543016 RHOBTB3O94955 611 aa13.4□□□□□ -0.26
DDX55-210ENST00000543016 RPN1P04843 607 aaKnown RBP13.4□□□□□ -0.26
DDX55-210ENST00000543016 SKIP12755 728 aa13.4□□□□□ -0.26
DDX55-210ENST00000543016 MAGEA10P43363 369 aaPredicted RBP13.4□□□□□ -0.26
DDX55-210ENST00000543016 FAM26FQ5R3K3 315 aa13.4□□□□□ -0.26
DDX55-210ENST00000543016 NT5DC1Q5TFE4 455 aa13.4□□□□□ -0.26
DDX55-210ENST00000543016 ZPBP2Q6X784 338 aa13.4□□□□□ -0.26
DDX55-210ENST00000543016 DEFB128Q7Z7B8 93 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms