RNA–Protein interactions for RNA: ENST00000542877.5

TNC-212, Transcript of tenascin C, humanhuman

TSL 1 (best) BASIC

Gene TNC, Length 5,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-212ENST00000542877 USP17L18D6R9N7 530 aa13.96□□□□□ -0.17
TNC-212ENST00000542877 USP17L22D6RA61 530 aa13.96□□□□□ -0.17
TNC-212ENST00000542877 USP17L17D6RBQ6 530 aa13.96□□□□□ -0.17
TNC-212ENST00000542877 USP17L19D6RCP7 530 aa13.96□□□□□ -0.17
TNC-212ENST00000542877 USP17L20D6RJB6 530 aa13.96□□□□□ -0.17
TNC-212ENST00000542877 FOXN1O15353 648 aa13.96□□□□□ -0.17
TNC-212ENST00000542877 GH2P01242 217 aa13.96□□□□□ -0.17
TNC-212ENST00000542877 USP17L24Q0WX57 530 aa13.96□□□□□ -0.17
TNC-212ENST00000542877 HLFQ16534 295 aa13.96□□□□□ -0.17
TNC-212ENST00000542877 RCSD1Q6JBY9 416 aa13.96□□□□□ -0.17
TNC-212ENST00000542877 USP17L6PQ6QN14 398 aa13.96□□□□□ -0.17
TNC-212ENST00000542877 ARHGAP18Q8N392 663 aa13.96□□□□□ -0.17
TNC-212ENST00000542877 KCNF1Q9H3M0 494 aa13.96□□□□□ -0.17
TNC-212ENST00000542877 SMYD3Q9H7B4 428 aa13.96□□□□□ -0.17
TNC-212ENST00000542877 TTC7AQ9ULT0 858 aaPredicted RBP13.96□□□□□ -0.17
TNC-212ENST00000542877 PPP1R37O75864 691 aa13.96□□□□□ -0.17
TNC-212ENST00000542877 EXOSC10Q01780 885 aaKnown RBP13.96□□□□□ -0.17
TNC-212ENST00000542877 ACTN3Q08043 901 aaPredicted RBP13.96□□□□□ -0.17
TNC-212ENST00000542877 ZNF394Q53GI3 561 aa13.96□□□□□ -0.17
TNC-212ENST00000542877 E4F1Q66K89 784 aaPredicted RBP13.96□□□□□ -0.17
TNC-212ENST00000542877 ANO5Q75V66 913 aa13.96□□□□□ -0.17
TNC-212ENST00000542877 VPS11Q9H270 941 aa13.96□□□□□ -0.17
TNC-212ENST00000542877 MLXIPLQ9NP71 852 aa13.96□□□□□ -0.17
TNC-212ENST00000542877 SUCLA2Q9P2R7 463 aaPredicted RBP13.96□□□□□ -0.17
TNC-212ENST00000542877 DCTN4Q9UJW0 460 aa13.96□□□□□ -0.17
TNC-212ENST00000542877 L3MBTL1Q9Y468 752 aa13.96□□□□□ -0.17
TNC-212ENST00000542877 ZBBXA8MT70 800 aa13.96□□□□□ -0.18
TNC-212ENST00000542877 GOLGA8MH3BSY2 632 aa13.96□□□□□ -0.18
TNC-212ENST00000542877 CREB3O43889 395 aa13.96□□□□□ -0.18
TNC-212ENST00000542877 CCDC22O60826 627 aa13.96□□□□□ -0.18
TNC-212ENST00000542877 PRDX5P30044 214 aa13.96□□□□□ -0.18
TNC-212ENST00000542877 HSPA9P38646 679 aaKnown RBP13.96□□□□□ -0.18
TNC-212ENST00000542877 PDIA2Q13087 525 aaKnown RBP13.96□□□□□ -0.18
TNC-212ENST00000542877 GPS1Q13098 491 aa13.96□□□□□ -0.18
TNC-212ENST00000542877 BYSLQ13895 437 aaKnown RBP13.96□□□□□ -0.18
TNC-212ENST00000542877 MAPK6Q16659 721 aa13.96□□□□□ -0.18
TNC-212ENST00000542877 PASD1Q8IV76 773 aa13.96□□□□□ -0.18
TNC-212ENST00000542877 PPM1NQ8N819 430 aa13.96□□□□□ -0.18
TNC-212ENST00000542877 GIMAP8Q8ND71 665 aaPredicted RBP13.96□□□□□ -0.18
TNC-212ENST00000542877 PSPC1Q8WXF1 523 aaKnown RBP13.96□□□□□ -0.18
TNC-212ENST00000542877 CEP19Q96LK0 163 aa13.96□□□□□ -0.18
TNC-212ENST00000542877 NDE1Q9NXR1 346 aa13.96□□□□□ -0.18
TNC-212ENST00000542877 MED14O60244 1454 aa13.96□□□□□ -0.18
TNC-212ENST00000542877 GSG1L2A8MUP6 293 aa13.95□□□□□ -0.18
TNC-212ENST00000542877 P4HBP07237 508 aaKnown RBP13.95□□□□□ -0.18
TNC-212ENST00000542877 NPR1P16066 1061 aa13.95□□□□□ -0.18
TNC-212ENST00000542877 SFNP31947 248 aa13.95□□□□□ -0.18
TNC-212ENST00000542877 OCA2Q04671 838 aa13.95□□□□□ -0.18
TNC-212ENST00000542877 STAT4Q14765 748 aa13.95□□□□□ -0.18
TNC-212ENST00000542877 MTF1Q14872 753 aa13.95□□□□□ -0.18
TNC-212ENST00000542877 SLC16A4O15374 487 aa13.95□□□□□ -0.18
TNC-212ENST00000542877 ORC4O43929 436 aa13.95□□□□□ -0.18
TNC-212ENST00000542877 ARHGDIAP52565 204 aa13.95□□□□□ -0.18
TNC-212ENST00000542877 MORF4L2Q15014 288 aa13.95□□□□□ -0.18
TNC-212ENST00000542877 LRIG3Q6UXM1 1119 aa13.95□□□□□ -0.18
TNC-212ENST00000542877 RGS9BPQ6ZS82 235 aa13.95□□□□□ -0.18
TNC-212ENST00000542877 RASGRP2Q7LDG7 609 aa13.95□□□□□ -0.18
TNC-212ENST00000542877 DPF2Q92785 391 aa13.95□□□□□ -0.18
TNC-212ENST00000542877 FAM213AQ9BRX8 229 aa13.95□□□□□ -0.18
TNC-212ENST00000542877 HEY1Q9Y5J3 304 aa13.95□□□□□ -0.18
TNC-212ENST00000542877 MEFVO15553 781 aaPredicted RBP13.95□□□□□ -0.18
TNC-212ENST00000542877 ASAP2O43150 1006 aa13.95□□□□□ -0.18
TNC-212ENST00000542877 NMT2O60551 498 aa13.95□□□□□ -0.18
TNC-212ENST00000542877 ZBED8Q8IZ13 594 aa13.95□□□□□ -0.18
TNC-212ENST00000542877 CEP70Q8NHQ1 597 aa13.95□□□□□ -0.18
TNC-212ENST00000542877 FAM161BQ96MY7 647 aa13.95□□□□□ -0.18
TNC-212ENST00000542877 OLFM3Q96PB7 478 aa13.95□□□□□ -0.18
TNC-212ENST00000542877 LRRC1Q9BTT6 524 aa13.95□□□□□ -0.18
TNC-212ENST00000542877 TRPV6Q9H1D0 765 aa13.95□□□□□ -0.18
TNC-212ENST00000542877 TMEM260Q9NX78 707 aa13.95□□□□□ -0.18
TNC-212ENST00000542877 FEM1BQ9UK73 627 aa13.95□□□□□ -0.18
TNC-212ENST00000542877 PALLDQ8WX93 1383 aa13.95□□□□□ -0.18
TNC-212ENST00000542877 HNRNPCL1O60812 293 aaKnown RBP13.95□□□□□ -0.18
TNC-212ENST00000542877 AGTP01019 485 aa13.95□□□□□ -0.18
TNC-212ENST00000542877 CIITAP33076 1130 aa13.95□□□□□ -0.18
TNC-212ENST00000542877 MDH1P40925 334 aaKnown RBP13.95□□□□□ -0.18
TNC-212ENST00000542877 USP11P51784 963 aa13.95□□□□□ -0.18
TNC-212ENST00000542877 DSTYKQ6XUX3 929 aa13.95□□□□□ -0.18
TNC-212ENST00000542877 EEPD1Q7L9B9 569 aa13.95□□□□□ -0.18
TNC-212ENST00000542877 NUDCD3Q8IVD9 361 aa13.95□□□□□ -0.18
TNC-212ENST00000542877 GLYCTKQ8IVS8 523 aa13.95□□□□□ -0.18
TNC-212ENST00000542877 EPN3Q9H201 632 aa13.95□□□□□ -0.18
TNC-212ENST00000542877 MINPP1Q9UNW1 487 aa13.95□□□□□ -0.18
TNC-212ENST00000542877 ABCB11O95342 1321 aa13.95□□□□□ -0.18
TNC-212ENST00000542877 PNPLA7Q6ZV29 1317 aa13.95□□□□□ -0.18
TNC-212ENST00000542877 USP17L10C9JJH3 530 aa13.95□□□□□ -0.18
TNC-212ENST00000542877 PDHA1P08559 390 aa13.95□□□□□ -0.18
TNC-212ENST00000542877 SDC4P31431 198 aa13.95□□□□□ -0.18
TNC-212ENST00000542877 IZUMO3Q5VZ72 239 aa13.95□□□□□ -0.18
TNC-212ENST00000542877 CEP95Q96GE4 821 aa13.95□□□□□ -0.18
TNC-212ENST00000542877 ZNF341Q9BYN7 854 aa13.95□□□□□ -0.18
TNC-212ENST00000542877 YIPF3Q9GZM5 350 aa13.95□□□□□ -0.18
TNC-212ENST00000542877 TRPC5Q9UL62 973 aaPredicted RBP13.95□□□□□ -0.18
TNC-212ENST00000542877 DENND3A2RUS2 1198 aa13.94□□□□□ -0.18
TNC-212ENST00000542877 PP2D1A8MPX8 630 aa13.94□□□□□ -0.18
TNC-212ENST00000542877 GNA15P30679 374 aa13.94□□□□□ -0.18
TNC-212ENST00000542877 ANKRD40Q6AI12 368 aa13.94□□□□□ -0.18
TNC-212ENST00000542877 RWDD4Q6NW29 188 aaKnown RBP13.94□□□□□ -0.18
TNC-212ENST00000542877 SYDE1Q6ZW31 735 aaPredicted RBP13.94□□□□□ -0.18
TNC-212ENST00000542877 MIGA2Q7L4E1 593 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms