RNA–Protein interactions for RNA: ENST00000542068.5

CNOT9-208, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CNOT9, Length 3,259 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-208ENST00000542068 ASTN1O14525 1302 aa16.55■□□□□ 0.24
CNOT9-208ENST00000542068 DRD4P21917 467 aa16.55■□□□□ 0.24
CNOT9-208ENST00000542068 CBWD6Q4V339 395 aa16.55■□□□□ 0.24
CNOT9-208ENST00000542068 CBWD3Q5JTY5 395 aa16.55■□□□□ 0.24
CNOT9-208ENST00000542068 CBWD5Q5RIA9 395 aa16.55■□□□□ 0.24
CNOT9-208ENST00000542068 SIAH1Q8IUQ4 282 aa16.55■□□□□ 0.24
CNOT9-208ENST00000542068 TATDN2Q93075 761 aa16.55■□□□□ 0.24
CNOT9-208ENST00000542068 ZDHHC15Q96MV8 337 aa16.55■□□□□ 0.24
CNOT9-208ENST00000542068 EXOC3O60645 756 aa16.55■□□□□ 0.24
CNOT9-208ENST00000542068 SPATA31C1P0DKV0 1188 aa16.55■□□□□ 0.24
CNOT9-208ENST00000542068 VPS41P49754 854 aa16.55■□□□□ 0.24
CNOT9-208ENST00000542068 CLK2P49760 499 aaKnown RBP16.55■□□□□ 0.24
CNOT9-208ENST00000542068 C10orf76Q5T2E6 689 aa16.55■□□□□ 0.24
CNOT9-208ENST00000542068 PPP1R18Q6NYC8 613 aa16.55■□□□□ 0.24
CNOT9-208ENST00000542068 YTHDF3Q7Z739 585 aaKnown RBP16.55■□□□□ 0.24
CNOT9-208ENST00000542068 CCDC197Q8NCU1 140 aa16.55■□□□□ 0.24
CNOT9-208ENST00000542068 RNF25Q96BH1 459 aaPredicted RBP16.55■□□□□ 0.24
CNOT9-208ENST00000542068 HOOK2Q96ED9 719 aa16.55■□□□□ 0.24
CNOT9-208ENST00000542068 CALR3Q96L12 384 aaKnown RBP16.55■□□□□ 0.24
CNOT9-208ENST00000542068 ZNF277Q9NRM2 450 aaPredicted RBP16.55■□□□□ 0.24
CNOT9-208ENST00000542068 INTS9Q9NV88 658 aaKnown RBP16.55■□□□□ 0.24
CNOT9-208ENST00000542068 EIF4E1BA6NMX2 242 aaKnown RBP16.55■□□□□ 0.24
CNOT9-208ENST00000542068 DGKZQ13574 1117 aa16.55■□□□□ 0.24
CNOT9-208ENST00000542068 SNX1Q13596 522 aa16.55■□□□□ 0.24
CNOT9-208ENST00000542068 DLGAP5Q15398 846 aa16.55■□□□□ 0.24
CNOT9-208ENST00000542068 ZKSCAN8Q15776 578 aaPredicted RBP16.55■□□□□ 0.24
CNOT9-208ENST00000542068 HS2ST1Q7LGA3 356 aa16.55■□□□□ 0.24
CNOT9-208ENST00000542068 JAMLQ86YT9 394 aa16.55■□□□□ 0.24
CNOT9-208ENST00000542068 ATP8B4Q8TF62 1192 aa16.55■□□□□ 0.24
CNOT9-208ENST00000542068 DCAF4Q8WV16 495 aa16.55■□□□□ 0.24
CNOT9-208ENST00000542068 POP1Q99575 1024 aaKnown RBP16.55■□□□□ 0.24
CNOT9-208ENST00000542068 GLIS2Q9BZE0 524 aaPredicted RBP16.55■□□□□ 0.24
CNOT9-208ENST00000542068 TMEM39BQ9GZU3 492 aa16.55■□□□□ 0.24
CNOT9-208ENST00000542068 SLITRK6Q9H5Y7 841 aa16.55■□□□□ 0.24
CNOT9-208ENST00000542068 MYCLP12524 364 aaPredicted RBP16.54■□□□□ 0.24
CNOT9-208ENST00000542068 TRIP13Q15645 432 aaPredicted RBP16.54■□□□□ 0.24
CNOT9-208ENST00000542068 CC2D2BQ6DHV5 1058 aa16.54■□□□□ 0.24
CNOT9-208ENST00000542068 DPY19L2P1Q6NXN4 242 aa16.54■□□□□ 0.24
CNOT9-208ENST00000542068 NSMFQ6X4W1 530 aa16.54■□□□□ 0.24
CNOT9-208ENST00000542068 FAM228AQ86W67 206 aa16.54■□□□□ 0.24
CNOT9-208ENST00000542068 NEK9Q8TD19 979 aa16.54■□□□□ 0.24
CNOT9-208ENST00000542068 ZNF577Q9BSK1 485 aa16.54■□□□□ 0.24
CNOT9-208ENST00000542068 RAB17Q9H0T7 212 aa16.54■□□□□ 0.24
CNOT9-208ENST00000542068 ARHGEF10LQ9HCE6 1279 aa16.54■□□□□ 0.24
CNOT9-208ENST00000542068 COG5Q9UP83 839 aa16.54■□□□□ 0.24
CNOT9-208ENST00000542068 LAMB2P55268 1798 aa16.54■□□□□ 0.24
CNOT9-208ENST00000542068 MYH7BA7E2Y1 1941 aa16.54■□□□□ 0.24
CNOT9-208ENST00000542068 LAMB1P07942 1786 aa16.54■□□□□ 0.24
CNOT9-208ENST00000542068 TISP43B9A030 160 aa16.54■□□□□ 0.24
CNOT9-208ENST00000542068 ACSL3O95573 720 aa16.54■□□□□ 0.24
CNOT9-208ENST00000542068 FERP16591 822 aa16.54■□□□□ 0.24
CNOT9-208ENST00000542068 SOX5P35711 763 aa16.54■□□□□ 0.24
CNOT9-208ENST00000542068 MARSP56192 900 aaKnown RBP16.54■□□□□ 0.24
CNOT9-208ENST00000542068 DACT2Q5SW24 774 aa16.54■□□□□ 0.24
CNOT9-208ENST00000542068 AGBL2Q5U5Z8 902 aa16.54■□□□□ 0.24
CNOT9-208ENST00000542068 THOC1Q96FV9 657 aaKnown RBP16.54■□□□□ 0.24
CNOT9-208ENST00000542068 ERP44Q9BS26 406 aa16.54■□□□□ 0.24
CNOT9-208ENST00000542068 TYW1Q9NV66 732 aaKnown RBP16.54■□□□□ 0.24
CNOT9-208ENST00000542068 NYAP2Q9P242 653 aa16.54■□□□□ 0.24
CNOT9-208ENST00000542068 TCRBV7S2A1N4TA0A589 114 aa16.53■□□□□ 0.24
CNOT9-208ENST00000542068 TMEM150BA6NC51 233 aa16.53■□□□□ 0.24
CNOT9-208ENST00000542068 POLR2MP0CAP2 368 aa16.53■□□□□ 0.24
CNOT9-208ENST00000542068 CDC25CP30307 473 aa16.53■□□□□ 0.24
CNOT9-208ENST00000542068 STRIP1Q5VSL9 837 aa16.53■□□□□ 0.24
CNOT9-208ENST00000542068 PPP4R3CPQ6ZMV5 832 aa16.53■□□□□ 0.24
CNOT9-208ENST00000542068 CCDC105Q8IYK2 499 aa16.53■□□□□ 0.24
CNOT9-208ENST00000542068 SGSM3Q96HU1 749 aa16.53■□□□□ 0.24
CNOT9-208ENST00000542068 HES6Q96HZ4 224 aa16.53■□□□□ 0.24
CNOT9-208ENST00000542068 ACTR5Q9H9F9 607 aaPredicted RBP16.53■□□□□ 0.24
CNOT9-208ENST00000542068 KCNMB3Q9NPA1 279 aa16.53■□□□□ 0.24
CNOT9-208ENST00000542068 KCNK9Q9NPC2 374 aa16.53■□□□□ 0.24
CNOT9-208ENST00000542068 STXBP5LQ9Y2K9 1186 aa16.53■□□□□ 0.24
CNOT9-208ENST00000542068 ARHGEF35A5YM69 484 aa16.53■□□□□ 0.24
CNOT9-208ENST00000542068 FOXN3O00409 490 aaPredicted RBP16.53■□□□□ 0.24
CNOT9-208ENST00000542068 ALAS1P13196 640 aa16.53■□□□□ 0.24
CNOT9-208ENST00000542068 NEDD9Q14511 834 aa16.53■□□□□ 0.24
CNOT9-208ENST00000542068 HOOK3Q86VS8 718 aa16.53■□□□□ 0.24
CNOT9-208ENST00000542068 RFFLQ8WZ73 363 aa16.53■□□□□ 0.24
CNOT9-208ENST00000542068 ATF5Q9Y2D1 282 aaPredicted RBP16.53■□□□□ 0.24
CNOT9-208ENST00000542068 L3MBTL1Q9Y468 752 aa16.53■□□□□ 0.24
CNOT9-208ENST00000542068 ALG6Q9Y672 507 aa16.53■□□□□ 0.24
CNOT9-208ENST00000542068 PDXKO00764 312 aa16.53■□□□□ 0.24
CNOT9-208ENST00000542068 RPA1P27694 616 aa16.53■□□□□ 0.24
CNOT9-208ENST00000542068 GBP2P32456 591 aaPredicted RBP16.53■□□□□ 0.24
CNOT9-208ENST00000542068 KIAA1755Q5JYT7 1200 aa16.53■□□□□ 0.24
CNOT9-208ENST00000542068 EP400NLQ6ZTU2 488 aa16.53■□□□□ 0.24
CNOT9-208ENST00000542068 KIF2BQ8N4N8 673 aa16.53■□□□□ 0.24
CNOT9-208ENST00000542068 GDAP1Q8TB36 358 aa16.53■□□□□ 0.24
CNOT9-208ENST00000542068 NAP1L4Q99733 375 aaKnown RBP16.53■□□□□ 0.24
CNOT9-208ENST00000542068 GLT8D2Q9H1C3 349 aa16.53■□□□□ 0.24
CNOT9-208ENST00000542068 TRAF3IP3Q9Y228 551 aa16.53■□□□□ 0.24
CNOT9-208ENST00000542068 STK38LQ9Y2H1 464 aa16.53■□□□□ 0.24
CNOT9-208ENST00000542068 SUGT1Q9Y2Z0 365 aa16.53■□□□□ 0.24
CNOT9-208ENST00000542068 GOLGA8IPA6NC78 632 aa16.52■□□□□ 0.24
CNOT9-208ENST00000542068 GOLGA8JA6NMD2 632 aa16.52■□□□□ 0.24
CNOT9-208ENST00000542068 TGFB1I1O43294 461 aa16.52■□□□□ 0.24
CNOT9-208ENST00000542068 GSCP56915 257 aaPredicted RBP16.52■□□□□ 0.24
CNOT9-208ENST00000542068 NAA25Q14CX7 972 aa16.52■□□□□ 0.24
CNOT9-208ENST00000542068 ACCSLQ4AC99 568 aa16.52■□□□□ 0.24
CNOT9-208ENST00000542068 SYT2Q8N9I0 419 aaPredicted RBP16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms