RNA–Protein interactions for RNA: ENST00000542029.1

VTN-203, Transcript of vitronectin, humanhuman

TSL 3

Gene VTN, Length 501 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTN-203ENST00000542029 LIMCH1Q9UPQ0 1083 aa12.72□□□□□ -0.37
VTN-203ENST00000542029 BTBD18B2RXH4 712 aa12.71□□□□□ -0.37
VTN-203ENST00000542029 NEMFO60524 1076 aa12.71□□□□□ -0.37
VTN-203ENST00000542029 DGAT1O75907 488 aa12.71□□□□□ -0.37
VTN-203ENST00000542029 SLITRK3O94933 977 aa12.71□□□□□ -0.37
VTN-203ENST00000542029 XRCC6P12956 609 aaKnown RBP eCLIP12.71□□□□□ -0.37
VTN-203ENST00000542029 POU5F1BQ06416 359 aa12.71□□□□□ -0.37
VTN-203ENST00000542029 LAMTOR4Q0VGL1 99 aa12.71□□□□□ -0.37
VTN-203ENST00000542029 ORC2Q13416 577 aaPredicted RBP12.71□□□□□ -0.37
VTN-203ENST00000542029 GIT2Q14161 759 aa12.71□□□□□ -0.37
VTN-203ENST00000542029 TFDP1Q14186 410 aa12.71□□□□□ -0.37
VTN-203ENST00000542029 SMC1AQ14683 1233 aaKnown RBP12.71□□□□□ -0.37
VTN-203ENST00000542029 NOMO2Q5JPE7 1267 aa12.71□□□□□ -0.37
VTN-203ENST00000542029 PLPP4Q5VZY2 271 aa12.71□□□□□ -0.37
VTN-203ENST00000542029 FERMT3Q86UX7 667 aa12.71□□□□□ -0.37
VTN-203ENST00000542029 KSR1Q8IVT5 923 aa12.71□□□□□ -0.37
VTN-203ENST00000542029 SLC39A11Q8N1S5 342 aa12.71□□□□□ -0.37
VTN-203ENST00000542029 CNNM3Q8NE01 707 aa12.71□□□□□ -0.37
VTN-203ENST00000542029 KHSRPQ92945 711 aaKnown RBP eCLIP12.71□□□□□ -0.37
VTN-203ENST00000542029 TMEM143Q96AN5 459 aa12.71□□□□□ -0.37
VTN-203ENST00000542029 CCDC51Q96ER9 411 aa12.71□□□□□ -0.37
VTN-203ENST00000542029 DYDC2Q96IM9 177 aa12.71□□□□□ -0.37
VTN-203ENST00000542029 CCDC43Q96MW1 224 aaKnown RBP12.71□□□□□ -0.37
VTN-203ENST00000542029 MTRQ99707 1265 aa12.71□□□□□ -0.37
VTN-203ENST00000542029 HSD17B14Q9BPX1 270 aa12.71□□□□□ -0.37
VTN-203ENST00000542029 EIF2AK1Q9BQI3 630 aaKnown RBP12.71□□□□□ -0.37
VTN-203ENST00000542029 LLPHQ9BRT6 129 aaKnown RBP12.71□□□□□ -0.37
VTN-203ENST00000542029 TTC12Q9H892 705 aaPredicted RBP12.71□□□□□ -0.37
VTN-203ENST00000542029 AGPAT5Q9NUQ2 364 aa12.71□□□□□ -0.37
VTN-203ENST00000542029 WRAP73Q9P2S5 460 aaPredicted RBP12.71□□□□□ -0.37
VTN-203ENST00000542029 HCSTQ9UBK5 93 aa12.71□□□□□ -0.37
VTN-203ENST00000542029 RALGAPA2Q2PPJ7 1873 aa12.71□□□□□ -0.37
VTN-203ENST00000542029 REV3LO60673 3130 aa12.71□□□□□ -0.38
VTN-203ENST00000542029 CNTNAP2Q9UHC6 1331 aa12.7□□□□□ -0.38
VTN-203ENST00000542029 PER2O15055 1255 aa12.7□□□□□ -0.38
VTN-203ENST00000542029 ERLIN2O94905 339 aa12.7□□□□□ -0.38
VTN-203ENST00000542029 LARGE1O95461 756 aa12.7□□□□□ -0.38
VTN-203ENST00000542029 GLP2RO95838 553 aa12.7□□□□□ -0.38
VTN-203ENST00000542029 SRGAP2CP0DJJ0 459 aa12.7□□□□□ -0.38
VTN-203ENST00000542029 AXLP30530 894 aa12.7□□□□□ -0.38
VTN-203ENST00000542029 BCAR1P56945 870 aa12.7□□□□□ -0.38
VTN-203ENST00000542029 HMGN5P82970 282 aaKnown RBP12.7□□□□□ -0.38
VTN-203ENST00000542029 CYP4A11Q02928 519 aa12.7□□□□□ -0.38
VTN-203ENST00000542029 CTTNQ14247 550 aaKnown RBP12.7□□□□□ -0.38
VTN-203ENST00000542029 MRPL43Q8N983 215 aaKnown RBP12.7□□□□□ -0.38
VTN-203ENST00000542029 TMEM87AQ8NBN3 555 aa12.7□□□□□ -0.38
VTN-203ENST00000542029 RNF149Q8NC42 400 aa12.7□□□□□ -0.38
VTN-203ENST00000542029 URGCPQ8TCY9 931 aa12.7□□□□□ -0.38
VTN-203ENST00000542029 CASP10Q92851 521 aa12.7□□□□□ -0.38
VTN-203ENST00000542029 ZSCAN31Q96LW9 406 aaPredicted RBP12.7□□□□□ -0.38
VTN-203ENST00000542029 PHF7Q9BWX1 381 aaPredicted RBP12.7□□□□□ -0.38
VTN-203ENST00000542029 UBN1Q9NPG3 1134 aa12.7□□□□□ -0.38
VTN-203ENST00000542029 BARX2Q9UMQ3 279 aaPredicted RBP12.7□□□□□ -0.38
VTN-203ENST00000542029 PCDHB2Q9Y5E7 798 aa12.7□□□□□ -0.38
VTN-203ENST00000542029 PCDHGC5Q9Y5F6 944 aa12.7□□□□□ -0.38
VTN-203ENST00000542029 MYH9P35579 1960 aaKnown RBP12.69□□□□□ -0.38
VTN-203ENST00000542029 FAM205CA6NFA0 338 aa12.69□□□□□ -0.38
VTN-203ENST00000542029 JAK2O60674 1132 aa12.69□□□□□ -0.38
VTN-203ENST00000542029 ZC3H11AO75152 810 aaKnown RBP eCLIP12.69□□□□□ -0.38
VTN-203ENST00000542029 TXKP42681 527 aa12.69□□□□□ -0.38
VTN-203ENST00000542029 PTENP60484 403 aa12.69□□□□□ -0.38
VTN-203ENST00000542029 RNASELQ05823 741 aaKnown RBP12.69□□□□□ -0.38
VTN-203ENST00000542029 TPRNQ4KMQ1 711 aa12.69□□□□□ -0.38
VTN-203ENST00000542029 HERC4Q5GLZ8 1057 aaPredicted RBP12.69□□□□□ -0.38
VTN-203ENST00000542029 MRPL10Q7Z7H8 261 aaKnown RBP12.69□□□□□ -0.38
VTN-203ENST00000542029 IFNLR1Q8IU57 520 aaPredicted RBP12.69□□□□□ -0.38
VTN-203ENST00000542029 ZNF579Q8NAF0 562 aaKnown RBP12.69□□□□□ -0.38
VTN-203ENST00000542029 SUSD6Q92537 303 aa12.69□□□□□ -0.38
VTN-203ENST00000542029 C8orf76Q96K31 380 aa12.69□□□□□ -0.38
VTN-203ENST00000542029 MTMR9Q96QG7 549 aa12.69□□□□□ -0.38
VTN-203ENST00000542029 C11orf16Q9NQ32 467 aa12.69□□□□□ -0.38
VTN-203ENST00000542029 SH2B1Q9NRF2 756 aaPredicted RBP12.69□□□□□ -0.38
VTN-203ENST00000542029 TBC1D13Q9NVG8 400 aa12.69□□□□□ -0.38
VTN-203ENST00000542029 DAXXQ9UER7 740 aaPredicted RBP12.69□□□□□ -0.38
VTN-203ENST00000542029 USP15Q9Y4E8 981 aaPredicted RBP12.69□□□□□ -0.38
VTN-203ENST00000542029 IRAK3Q9Y616 596 aa12.69□□□□□ -0.38
VTN-203ENST00000542029 OFD1O75665 1012 aa12.68□□□□□ -0.38
VTN-203ENST00000542029 GALTP07902 379 aa12.68□□□□□ -0.38
VTN-203ENST00000542029 HOXA11P31270 313 aaPredicted RBP12.68□□□□□ -0.38
VTN-203ENST00000542029 PBX3P40426 434 aa12.68□□□□□ -0.38
VTN-203ENST00000542029 TECP42680 631 aa12.68□□□□□ -0.38
VTN-203ENST00000542029 TRAPPC10P48553 1259 aa12.68□□□□□ -0.38
VTN-203ENST00000542029 RBM25P49756 843 aaKnown RBP12.68□□□□□ -0.38
VTN-203ENST00000542029 KCNC3Q14003 757 aa12.68□□□□□ -0.38
VTN-203ENST00000542029 CBX2Q14781 532 aaPredicted RBP12.68□□□□□ -0.38
VTN-203ENST00000542029 ANKRD54Q6NXT1 300 aa12.68□□□□□ -0.38
VTN-203ENST00000542029 NOTUMQ6P988 496 aa12.68□□□□□ -0.38
VTN-203ENST00000542029 DDX53Q86TM3 631 aaKnown RBP12.68□□□□□ -0.38
VTN-203ENST00000542029 RNF135Q8IUD6 432 aa12.68□□□□□ -0.38
VTN-203ENST00000542029 HACE1Q8IYU2 909 aa12.68□□□□□ -0.38
VTN-203ENST00000542029 VPS52Q8N1B4 723 aa12.68□□□□□ -0.38
VTN-203ENST00000542029 FAM122AQ96E09 287 aa12.68□□□□□ -0.38
VTN-203ENST00000542029 IGSF21Q96ID5 467 aa12.68□□□□□ -0.38
VTN-203ENST00000542029 FAM193BQ96PV7 902 aaPredicted RBP12.68□□□□□ -0.38
VTN-203ENST00000542029 TMEM175Q9BSA9 504 aa12.68□□□□□ -0.38
VTN-203ENST00000542029 NFKBIZQ9BYH8 718 aa12.68□□□□□ -0.38
VTN-203ENST00000542029 FOXP1Q9H334 677 aaPredicted RBP12.68□□□□□ -0.38
VTN-203ENST00000542029 RSAD1Q9HA92 442 aa12.68□□□□□ -0.38
VTN-203ENST00000542029 XPNPEP1Q9NQW7 623 aa12.68□□□□□ -0.38
VTN-203ENST00000542029 INPP5FQ9Y2H2 1132 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms