RNA–Protein interactions for RNA: ENST00000541963.5

CPSF7-220, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4 BASIC

Gene CPSF7, Length 549 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-220ENST00000541963 RASSF10A6NK89 507 aa6.53□□□□□ -1.36
CPSF7-220ENST00000541963 F8W031 263 aaPredicted RBP6.53□□□□□ -1.36
CPSF7-220ENST00000541963 TRAF5O00463 557 aa6.53□□□□□ -1.36
CPSF7-220ENST00000541963 WNT10BO00744 389 aa6.53□□□□□ -1.36
CPSF7-220ENST00000541963 GSTA4O15217 222 aa6.53□□□□□ -1.36
CPSF7-220ENST00000541963 SDSP20132 328 aa6.53□□□□□ -1.36
CPSF7-220ENST00000541963 FGFR2P21802 821 aa6.53□□□□□ -1.36
CPSF7-220ENST00000541963 RPL11P62913 178 aaKnown RBP6.53□□□□□ -1.36
CPSF7-220ENST00000541963 CYP4F3Q08477 520 aa6.53□□□□□ -1.36
CPSF7-220ENST00000541963 CHAF1AQ13111 956 aaPredicted RBP6.53□□□□□ -1.36
CPSF7-220ENST00000541963 PAK1Q13153 545 aa6.53□□□□□ -1.36
CPSF7-220ENST00000541963 OS9Q13438 667 aaPredicted RBP6.53□□□□□ -1.36
CPSF7-220ENST00000541963 KIZQ2M2Z5 673 aa6.53□□□□□ -1.36
CPSF7-220ENST00000541963 CFAP100Q494V2 611 aa6.53□□□□□ -1.36
CPSF7-220ENST00000541963 MFSD14BQ5SR56 506 aa6.53□□□□□ -1.36
CPSF7-220ENST00000541963 GORABQ5T7V8 394 aa6.53□□□□□ -1.36
CPSF7-220ENST00000541963 CST9Q5W186 159 aa6.53□□□□□ -1.36
CPSF7-220ENST00000541963 WWC2Q6AWC2 1192 aa6.53□□□□□ -1.36
CPSF7-220ENST00000541963 ATG9AQ7Z3C6 839 aa6.53□□□□□ -1.36
CPSF7-220ENST00000541963 VSIG10LQ86VR7 867 aa6.53□□□□□ -1.36
CPSF7-220ENST00000541963 APOBEC3FQ8IUX4 373 aaKnown RBP6.53□□□□□ -1.36
CPSF7-220ENST00000541963 VGLL2Q8N8G2 317 aa6.53□□□□□ -1.36
CPSF7-220ENST00000541963 WDR66Q8TBY9 1149 aa6.53□□□□□ -1.36
CPSF7-220ENST00000541963 DDX1Q92499 740 aaKnown RBP6.53□□□□□ -1.36
CPSF7-220ENST00000541963 HHIPL1Q96JK4 782 aa6.53□□□□□ -1.36
CPSF7-220ENST00000541963 ANP32EQ9BTT0 268 aa6.53□□□□□ -1.36
CPSF7-220ENST00000541963 MRIQ9BWK5 157 aa6.53□□□□□ -1.36
CPSF7-220ENST00000541963 GGA3Q9NZ52 723 aa6.53□□□□□ -1.36
CPSF7-220ENST00000541963 TMEFF2Q9UIK5 374 aaPredicted RBP6.53□□□□□ -1.36
CPSF7-220ENST00000541963 DENND2AQ9ULE3 1009 aa6.53□□□□□ -1.36
CPSF7-220ENST00000541963 DDX19BQ9UMR2 479 aa6.53□□□□□ -1.36
CPSF7-220ENST00000541963 PCDHA2Q9Y5H9 948 aa6.53□□□□□ -1.36
CPSF7-220ENST00000541963 TNPO3Q9Y5L0 923 aaKnown RBP6.53□□□□□ -1.36
CPSF7-220ENST00000541963 CNTNAP1P78357 1384 aa6.53□□□□□ -1.36
CPSF7-220ENST00000541963 MAST3O60307 1309 aa6.52□□□□□ -1.37
CPSF7-220ENST00000541963 TRPM7Q96QT4 1865 aa6.52□□□□□ -1.37
CPSF7-220ENST00000541963 SURF6O75683 361 aaKnown RBP6.52□□□□□ -1.37
CPSF7-220ENST00000541963 DNAJC8O75937 253 aaPredicted RBP6.52□□□□□ -1.37
CPSF7-220ENST00000541963 KIR2DL1P43626 348 aaPredicted RBP6.52□□□□□ -1.37
CPSF7-220ENST00000541963 KIR2DL2P43627 348 aaPredicted RBP6.52□□□□□ -1.37
CPSF7-220ENST00000541963 FKBP1BP68106 108 aa6.52□□□□□ -1.37
CPSF7-220ENST00000541963 MAP2K1Q02750 393 aaPredicted RBP6.52□□□□□ -1.37
CPSF7-220ENST00000541963 TNFAIP1Q13829 316 aa6.52□□□□□ -1.37
CPSF7-220ENST00000541963 MVPQ14764 893 aaKnown RBP6.52□□□□□ -1.37
CPSF7-220ENST00000541963 HSP90AB4PQ58FF6 505 aa6.52□□□□□ -1.37
CPSF7-220ENST00000541963 FAM47CQ5HY64 1035 aa6.52□□□□□ -1.37
CPSF7-220ENST00000541963 ZPBP2Q6X784 338 aa6.52□□□□□ -1.37
CPSF7-220ENST00000541963 LBX2Q6XYB7 198 aa6.52□□□□□ -1.37
CPSF7-220ENST00000541963 OXR1Q8N573 874 aa6.52□□□□□ -1.37
CPSF7-220ENST00000541963 ZGPATQ8N5A5 531 aaKnown RBP6.52□□□□□ -1.37
CPSF7-220ENST00000541963 FLCNQ8NFG4 579 aa6.52□□□□□ -1.37
CPSF7-220ENST00000541963 PANK1Q8TE04 598 aa6.52□□□□□ -1.37
CPSF7-220ENST00000541963 MAP6Q96JE9 813 aa6.52□□□□□ -1.37
CPSF7-220ENST00000541963 NEUROD6Q96NK8 337 aa6.52□□□□□ -1.37
CPSF7-220ENST00000541963 ALPK1Q96QP1 1244 aa6.52□□□□□ -1.37
CPSF7-220ENST00000541963 GBA2Q9HCG7 927 aaPredicted RBP6.52□□□□□ -1.37
CPSF7-220ENST00000541963 ERVK13-1Q9NX77 482 aa6.52□□□□□ -1.37
CPSF7-220ENST00000541963 PA2G4Q9UQ80 394 aaKnown RBP6.52□□□□□ -1.37
CPSF7-220ENST00000541963 TNNQ9UQP3 1299 aa6.52□□□□□ -1.37
CPSF7-220ENST00000541963 JAG2Q9Y219 1238 aa6.52□□□□□ -1.37
CPSF7-220ENST00000541963 PCDHA8Q9Y5H6 950 aa6.52□□□□□ -1.37
CPSF7-220ENST00000541963 PPP2R3BQ9Y5P8 575 aa6.52□□□□□ -1.37
CPSF7-220ENST00000541963 WDR33Q9C0J8 1336 aaKnown RBP6.51□□□□□ -1.37
CPSF7-220ENST00000541963 POLR2AP24928 1970 aaKnown RBP6.51□□□□□ -1.37
CPSF7-220ENST00000541963 A0A1W2PQ45 241 aaPredicted RBP6.51□□□□□ -1.37
CPSF7-220ENST00000541963 A0A1W2PQJ5 194 aa6.51□□□□□ -1.37
CPSF7-220ENST00000541963 A0A1W2PQY0 241 aa6.51□□□□□ -1.37
CPSF7-220ENST00000541963 TCRBV16S1A1N1A0A5B0 115 aa6.51□□□□□ -1.37
CPSF7-220ENST00000541963 ADM5C9JUS6 153 aa6.51□□□□□ -1.37
CPSF7-220ENST00000541963 FAM47E-STBD1D6RA91 191 aa6.51□□□□□ -1.37
CPSF7-220ENST00000541963 HMMRO75330 724 aa6.51□□□□□ -1.37
CPSF7-220ENST00000541963 RASGRP1O95267 797 aa6.51□□□□□ -1.37
CPSF7-220ENST00000541963 NPTXRO95502 500 aa6.51□□□□□ -1.37
CPSF7-220ENST00000541963 PRNPP04156 253 aa6.51□□□□□ -1.37
CPSF7-220ENST00000541963 CD8BP10966 210 aa6.51□□□□□ -1.37
CPSF7-220ENST00000541963 SSTR4P31391 388 aa6.51□□□□□ -1.37
CPSF7-220ENST00000541963 MAP2K2P36507 400 aa6.51□□□□□ -1.37
CPSF7-220ENST00000541963 CD96P40200 585 aa6.51□□□□□ -1.37
CPSF7-220ENST00000541963 STAT3P40763 770 aa6.51□□□□□ -1.37
CPSF7-220ENST00000541963 HUNKP57058 714 aa6.51□□□□□ -1.37
CPSF7-220ENST00000541963 TIMM10P62072 90 aa6.51□□□□□ -1.37
CPSF7-220ENST00000541963 NFKB2Q00653 900 aa6.51□□□□□ -1.37
CPSF7-220ENST00000541963 CHRNEQ04844 493 aa6.51□□□□□ -1.37
CPSF7-220ENST00000541963 TFCP2Q12800 502 aa6.51□□□□□ -1.37
CPSF7-220ENST00000541963 LSAMPQ13449 338 aa6.51□□□□□ -1.37
CPSF7-220ENST00000541963 SUPT20HL1Q3ZLR7 823 aa6.51□□□□□ -1.37
CPSF7-220ENST00000541963 SPTY2D1Q68D10 685 aaPredicted RBP6.51□□□□□ -1.37
CPSF7-220ENST00000541963 ARMC9Q7Z3E5 817 aa6.51□□□□□ -1.37
CPSF7-220ENST00000541963 FGD2Q7Z6J4 655 aa6.51□□□□□ -1.37
CPSF7-220ENST00000541963 SAPCD2Q86UD0 394 aa6.51□□□□□ -1.37
CPSF7-220ENST00000541963 THNSL2Q86YJ6 484 aa6.51□□□□□ -1.37
CPSF7-220ENST00000541963 ERC1Q8IUD2 1116 aa6.51□□□□□ -1.37
CPSF7-220ENST00000541963 RPAP2Q8IXW5 612 aaPredicted RBP6.51□□□□□ -1.37
CPSF7-220ENST00000541963 CERS5Q8N5B7 392 aa6.51□□□□□ -1.37
CPSF7-220ENST00000541963 ANKS4BQ8N8V4 417 aa6.51□□□□□ -1.37
CPSF7-220ENST00000541963 RCBTB1Q8NDN9 531 aa6.51□□□□□ -1.37
CPSF7-220ENST00000541963 PI4K2BQ8TCG2 481 aa6.51□□□□□ -1.37
CPSF7-220ENST00000541963 SSH3Q8TE77 659 aa6.51□□□□□ -1.37
CPSF7-220ENST00000541963 USP33Q8TEY7 942 aa6.51□□□□□ -1.37
CPSF7-220ENST00000541963 LEO1Q8WVC0 666 aaPredicted RBP6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms