RNA–Protein interactions for RNA: ENST00000541888.2

AC005840.3-201, humanhuman

TSL 5 BASIC

Gene AC005840.3, Length 1,803 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC005840.3-201ENST00000541888 SPATA33Q96N06 139 aa8.54□□□□□ -1.04
AC005840.3-201ENST00000541888 SEMA6BQ9H3T3 888 aa8.54□□□□□ -1.04
AC005840.3-201ENST00000541888 ZSWIM4Q9H7M6 989 aa8.54□□□□□ -1.04
AC005840.3-201ENST00000541888 DDX41Q9UJV9 622 aaKnown RBP8.54□□□□□ -1.04
AC005840.3-201ENST00000541888 HIP1RO75146 1068 aa8.54□□□□□ -1.04
AC005840.3-201ENST00000541888 PRPF6O94906 941 aaKnown RBP8.54□□□□□ -1.04
AC005840.3-201ENST00000541888 STBD1O95210 358 aa8.54□□□□□ -1.04
AC005840.3-201ENST00000541888 SUPT20HL2P0C7V6 817 aa8.54□□□□□ -1.04
AC005840.3-201ENST00000541888 ZSCAN20P17040 1043 aaPredicted RBP8.54□□□□□ -1.04
AC005840.3-201ENST00000541888 MAPK4P31152 587 aa8.54□□□□□ -1.04
AC005840.3-201ENST00000541888 GMPRP36959 345 aa8.54□□□□□ -1.04
AC005840.3-201ENST00000541888 PSMC5P62195 406 aa8.54□□□□□ -1.04
AC005840.3-201ENST00000541888 CCDC144BQ3MJ40 725 aa8.54□□□□□ -1.04
AC005840.3-201ENST00000541888 FAM26FQ5R3K3 315 aa8.54□□□□□ -1.04
AC005840.3-201ENST00000541888 ZNF746Q6NUN9 644 aaPredicted RBP8.54□□□□□ -1.04
AC005840.3-201ENST00000541888 XRRA1Q6P2D8 792 aa8.54□□□□□ -1.04
AC005840.3-201ENST00000541888 CCDC62Q6P9F0 684 aa8.54□□□□□ -1.04
AC005840.3-201ENST00000541888 DHX37Q8IY37 1157 aaKnown RBP8.54□□□□□ -1.04
AC005840.3-201ENST00000541888 MYCT1Q8N699 235 aa8.54□□□□□ -1.04
AC005840.3-201ENST00000541888 TRIML1Q8N9V2 468 aa8.54□□□□□ -1.04
AC005840.3-201ENST00000541888 CCDC43Q96MW1 224 aaKnown RBP8.54□□□□□ -1.04
AC005840.3-201ENST00000541888 PPP1R16BQ96T49 567 aa8.54□□□□□ -1.04
AC005840.3-201ENST00000541888 XPO4Q9C0E2 1151 aaKnown RBP8.54□□□□□ -1.04
AC005840.3-201ENST00000541888 KATNBL1Q9H079 304 aa8.54□□□□□ -1.04
AC005840.3-201ENST00000541888 ZFYVE28Q9HCC9 887 aa8.54□□□□□ -1.04
AC005840.3-201ENST00000541888 POLMQ9NP87 494 aaPredicted RBP8.54□□□□□ -1.04
AC005840.3-201ENST00000541888 TRIP12Q14669 1992 aaPredicted RBP8.53□□□□□ -1.04
AC005840.3-201ENST00000541888 NOP56O00567 594 aaKnown RBP8.53□□□□□ -1.04
AC005840.3-201ENST00000541888 TBCAO75347 108 aaKnown RBP8.53□□□□□ -1.04
AC005840.3-201ENST00000541888 GCNT3O95395 438 aa8.53□□□□□ -1.04
AC005840.3-201ENST00000541888 PSAPP07602 524 aa8.53□□□□□ -1.04
AC005840.3-201ENST00000541888 GJB1P08034 283 aa8.53□□□□□ -1.04
AC005840.3-201ENST00000541888 ELNP15502 786 aa8.53□□□□□ -1.04
AC005840.3-201ENST00000541888 ICAM3P32942 547 aa8.53□□□□□ -1.04
AC005840.3-201ENST00000541888 HOXD13P35453 343 aa8.53□□□□□ -1.04
AC005840.3-201ENST00000541888 PSMC4P43686 418 aa8.53□□□□□ -1.04
AC005840.3-201ENST00000541888 TM4SF4P48230 202 aa8.53□□□□□ -1.04
AC005840.3-201ENST00000541888 ZNF75DP51815 510 aa8.53□□□□□ -1.04
AC005840.3-201ENST00000541888 JAK3P52333 1124 aa8.53□□□□□ -1.04
AC005840.3-201ENST00000541888 PTSQ03393 145 aa8.53□□□□□ -1.04
AC005840.3-201ENST00000541888 EHHADHQ08426 723 aa8.53□□□□□ -1.04
AC005840.3-201ENST00000541888 MAPK7Q13164 816 aa8.53□□□□□ -1.04
AC005840.3-201ENST00000541888 DRP2Q13474 957 aa8.53□□□□□ -1.04
AC005840.3-201ENST00000541888 KCNB1Q14721 858 aa8.53□□□□□ -1.04
AC005840.3-201ENST00000541888 TPD52L1Q16890 204 aaPredicted RBP8.53□□□□□ -1.04
AC005840.3-201ENST00000541888 FAM102BQ5T8I3 360 aa8.53□□□□□ -1.04
AC005840.3-201ENST00000541888 GTF3C2Q8WUA4 911 aaPredicted RBP8.53□□□□□ -1.04
AC005840.3-201ENST00000541888 BSNDQ8WZ55 320 aa8.53□□□□□ -1.04
AC005840.3-201ENST00000541888 GLG1Q92896 1179 aa8.53□□□□□ -1.04
AC005840.3-201ENST00000541888 CEP170P1Q96L14 293 aa8.53□□□□□ -1.04
AC005840.3-201ENST00000541888 NACC1Q96RE7 527 aa8.53□□□□□ -1.04
AC005840.3-201ENST00000541888 DUSP9Q99956 384 aaKnown RBP8.53□□□□□ -1.04
AC005840.3-201ENST00000541888 TINF2Q9BSI4 451 aa8.53□□□□□ -1.04
AC005840.3-201ENST00000541888 MRPL44Q9H9J2 332 aaKnown RBP8.53□□□□□ -1.04
AC005840.3-201ENST00000541888 MAGEF1Q9HAY2 307 aa8.53□□□□□ -1.04
AC005840.3-201ENST00000541888 ZNF302Q9NR11 478 aa8.53□□□□□ -1.04
AC005840.3-201ENST00000541888 INTS13Q9NVM9 706 aa8.53□□□□□ -1.04
AC005840.3-201ENST00000541888 RMND1Q9NWS8 449 aa8.53□□□□□ -1.04
AC005840.3-201ENST00000541888 PCDHA2Q9Y5H9 948 aa8.53□□□□□ -1.04
AC005840.3-201ENST00000541888 NFASCO94856 1347 aa8.52□□□□□ -1.04
AC005840.3-201ENST00000541888 CA12O43570 354 aa8.52□□□□□ -1.04
AC005840.3-201ENST00000541888 STRNO43815 780 aa8.52□□□□□ -1.04
AC005840.3-201ENST00000541888 STAM2O75886 525 aa8.52□□□□□ -1.04
AC005840.3-201ENST00000541888 FAM13AO94988 1023 aa8.52□□□□□ -1.04
AC005840.3-201ENST00000541888 SERPINC1P01008 464 aa8.52□□□□□ -1.04
AC005840.3-201ENST00000541888 MYCP01106 439 aaPredicted RBP8.52□□□□□ -1.04
AC005840.3-201ENST00000541888 CDK11BP21127 795 aaKnown RBP8.52□□□□□ -1.04
AC005840.3-201ENST00000541888 COPB2P35606 906 aa8.52□□□□□ -1.04
AC005840.3-201ENST00000541888 IGBP1P78318 339 aa8.52□□□□□ -1.04
AC005840.3-201ENST00000541888 FANCCQ00597 558 aa8.52□□□□□ -1.04
AC005840.3-201ENST00000541888 PRKCZQ05513 592 aa8.52□□□□□ -1.04
AC005840.3-201ENST00000541888 ARHGAP1Q07960 439 aa8.52□□□□□ -1.04
AC005840.3-201ENST00000541888 UVSSAQ2YD98 709 aa8.52□□□□□ -1.04
AC005840.3-201ENST00000541888 CELF3Q5SZQ8 465 aaKnown RBP8.52□□□□□ -1.04
AC005840.3-201ENST00000541888 MIS18BP1Q6P0N0 1132 aa8.52□□□□□ -1.04
AC005840.3-201ENST00000541888 CNNM4Q6P4Q7 775 aa8.52□□□□□ -1.04
AC005840.3-201ENST00000541888 TEX2Q8IWB9 1127 aa8.52□□□□□ -1.04
AC005840.3-201ENST00000541888 CCDC65Q8IXS2 484 aa8.52□□□□□ -1.04
AC005840.3-201ENST00000541888 DRC7Q8IY82 874 aa8.52□□□□□ -1.04
AC005840.3-201ENST00000541888 AFG1LQ8WV93 481 aa8.52□□□□□ -1.04
AC005840.3-201ENST00000541888 SCFD1Q8WVM8 642 aa8.52□□□□□ -1.04
AC005840.3-201ENST00000541888 TMEM143Q96AN5 459 aa8.52□□□□□ -1.04
AC005840.3-201ENST00000541888 CDHR1Q96JP9 859 aa8.52□□□□□ -1.04
AC005840.3-201ENST00000541888 GPR20Q99678 358 aa8.52□□□□□ -1.04
AC005840.3-201ENST00000541888 BPIFA3Q9BQP9 254 aa8.52□□□□□ -1.04
AC005840.3-201ENST00000541888 SRRTQ9BXP5 876 aaKnown RBP8.52□□□□□ -1.04
AC005840.3-201ENST00000541888 TAB2Q9NYJ8 693 aa8.52□□□□□ -1.04
AC005840.3-201ENST00000541888 ZNF236Q9UL36 1845 aa8.52□□□□□ -1.05
AC005840.3-201ENST00000541888 IGSF9BQ9UPX0 1349 aa8.52□□□□□ -1.05
AC005840.3-201ENST00000541888 ASB14A6NK59 587 aa8.52□□□□□ -1.05
AC005840.3-201ENST00000541888 RASSF10A6NK89 507 aa8.52□□□□□ -1.05
AC005840.3-201ENST00000541888 PES1O00541 588 aaKnown RBP8.52□□□□□ -1.05
AC005840.3-201ENST00000541888 IKBKBO14920 756 aa8.52□□□□□ -1.05
AC005840.3-201ENST00000541888 CLIC2O15247 247 aa8.52□□□□□ -1.05
AC005840.3-201ENST00000541888 MAFGO15525 162 aa8.52□□□□□ -1.05
AC005840.3-201ENST00000541888 TEX33O43247 280 aa8.52□□□□□ -1.05
AC005840.3-201ENST00000541888 SFNP31947 248 aa8.52□□□□□ -1.05
AC005840.3-201ENST00000541888 SCTRP47872 440 aa8.52□□□□□ -1.05
AC005840.3-201ENST00000541888 LACTBP83111 547 aaPredicted RBP8.52□□□□□ -1.05
AC005840.3-201ENST00000541888 BEX3Q00994 111 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms