RNA–Protein interactions for RNA: ENST00000541735.5

DMD-228, Transcript of dystrophin, humanhuman

TSL 5 BASIC

Gene DMD, Length 7,080 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DMD-228ENST00000541735 KLRC2P26717 231 aa6.72□□□□□ -1.33
DMD-228ENST00000541735 TNFAIP2Q03169 654 aa6.72□□□□□ -1.33
DMD-228ENST00000541735 BTKQ06187 659 aa6.72□□□□□ -1.33
DMD-228ENST00000541735 NR1H3Q13133 447 aa6.72□□□□□ -1.33
DMD-228ENST00000541735 SNAP47Q5SQN1 464 aa6.72□□□□□ -1.33
DMD-228ENST00000541735 LAYNQ6UX15 382 aa6.72□□□□□ -1.33
DMD-228ENST00000541735 COMMD2Q86X83 199 aa6.72□□□□□ -1.33
DMD-228ENST00000541735 NSUN6Q8TEA1 469 aaKnown RBP6.72□□□□□ -1.33
DMD-228ENST00000541735 GIPC2Q8TF65 315 aa6.72□□□□□ -1.33
DMD-228ENST00000541735 PIGBQ92521 554 aa6.72□□□□□ -1.33
DMD-228ENST00000541735 KLHL11Q9NVR0 708 aa6.72□□□□□ -1.33
DMD-228ENST00000541735 IQANK1A0A1B0GTG1 560 aa6.72□□□□□ -1.33
DMD-228ENST00000541735 ITGA4P13612 1032 aa6.72□□□□□ -1.33
DMD-228ENST00000541735 PFKFB1P16118 471 aa6.72□□□□□ -1.33
DMD-228ENST00000541735 GUCA1AP43080 201 aaPredicted RBP6.72□□□□□ -1.33
DMD-228ENST00000541735 GCLMP48507 274 aa6.72□□□□□ -1.33
DMD-228ENST00000541735 PMS1P54277 932 aaKnown RBP6.72□□□□□ -1.33
DMD-228ENST00000541735 GUCY2DQ02846 1103 aa6.72□□□□□ -1.33
DMD-228ENST00000541735 TTC8Q8TAM2 541 aa6.72□□□□□ -1.33
DMD-228ENST00000541735 CSGALNACT1Q8TDX6 532 aa6.72□□□□□ -1.33
DMD-228ENST00000541735 ABTB1Q969K4 478 aaPredicted RBP6.72□□□□□ -1.33
DMD-228ENST00000541735 CLIP3Q96DZ5 547 aa6.72□□□□□ -1.33
DMD-228ENST00000541735 GJD4Q96KN9 370 aaPredicted RBP6.72□□□□□ -1.33
DMD-228ENST00000541735 DDX50Q9BQ39 737 aaKnown RBP6.72□□□□□ -1.33
DMD-228ENST00000541735 AP1M1Q9BXS5 423 aa6.72□□□□□ -1.33
DMD-228ENST00000541735 FAF1Q9UNN5 650 aaPredicted RBP6.72□□□□□ -1.33
DMD-228ENST00000541735 CLTAP09496 248 aa6.72□□□□□ -1.33
DMD-228ENST00000541735 ALDH6A1Q02252 535 aaKnown RBP6.72□□□□□ -1.33
DMD-228ENST00000541735 MAP3K21Q5TCX8 1036 aa6.72□□□□□ -1.33
DMD-228ENST00000541735 GLB1LQ6UWU2 654 aa6.72□□□□□ -1.33
DMD-228ENST00000541735 CHSY1Q86X52 802 aa6.72□□□□□ -1.33
DMD-228ENST00000541735 CARNMT1Q8N4J0 409 aa6.72□□□□□ -1.33
DMD-228ENST00000541735 TMEM143Q96AN5 459 aa6.72□□□□□ -1.33
DMD-228ENST00000541735 CENPTQ96BT3 561 aa6.72□□□□□ -1.33
DMD-228ENST00000541735 TMEM206Q9H813 350 aa6.72□□□□□ -1.33
DMD-228ENST00000541735 NDE1Q9NXR1 346 aa6.72□□□□□ -1.33
DMD-228ENST00000541735 STX18Q9P2W9 335 aaKnown RBP6.72□□□□□ -1.33
DMD-228ENST00000541735 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.72□□□□□ -1.33
DMD-228ENST00000541735 ATP8A1Q9Y2Q0 1164 aa6.72□□□□□ -1.33
DMD-228ENST00000541735 TBX22Q9Y458 520 aa6.72□□□□□ -1.33
DMD-228ENST00000541735 SYCE1LA8MT33 242 aa6.71□□□□□ -1.33
DMD-228ENST00000541735 NMT2O60551 498 aa6.71□□□□□ -1.33
DMD-228ENST00000541735 GRAP2O75791 330 aa6.71□□□□□ -1.33
DMD-228ENST00000541735 ATP6V1C1P21283 382 aa6.71□□□□□ -1.33
DMD-228ENST00000541735 EEF1DP29692 281 aaKnown RBP6.71□□□□□ -1.33
DMD-228ENST00000541735 GMPSP49915 693 aaPredicted RBP6.71□□□□□ -1.33
DMD-228ENST00000541735 MAP1SQ66K74 1059 aaPredicted RBP6.71□□□□□ -1.33
DMD-228ENST00000541735 MB21D1Q8N884 522 aa6.71□□□□□ -1.33
DMD-228ENST00000541735 STKLD1Q8NE28 680 aa6.71□□□□□ -1.33
DMD-228ENST00000541735 PPP1R13LQ8WUF5 828 aa6.71□□□□□ -1.33
DMD-228ENST00000541735 TTC17Q96AE7 1141 aa6.71□□□□□ -1.33
DMD-228ENST00000541735 ZNF274Q96GC6 653 aaPredicted RBP6.71□□□□□ -1.33
DMD-228ENST00000541735 CCDC3Q9BQI4 270 aa6.71□□□□□ -1.33
DMD-228ENST00000541735 SMARCAD1Q9H4L7 1026 aa6.71□□□□□ -1.33
DMD-228ENST00000541735 GBA2Q9HCG7 927 aaPredicted RBP6.71□□□□□ -1.33
DMD-228ENST00000541735 PKP3Q9Y446 797 aa6.71□□□□□ -1.33
DMD-228ENST00000541735 NR2E3Q9Y5X4 410 aa6.71□□□□□ -1.33
DMD-228ENST00000541735 EFCAB8A8MWE9 144 aa6.71□□□□□ -1.33
DMD-228ENST00000541735 HIP1RO75146 1068 aa6.71□□□□□ -1.33
DMD-228ENST00000541735 MBL2P11226 248 aaPredicted RBP6.71□□□□□ -1.33
DMD-228ENST00000541735 CDC16Q13042 620 aa6.71□□□□□ -1.33
DMD-228ENST00000541735 CDH18Q13634 790 aa6.71□□□□□ -1.33
DMD-228ENST00000541735 C16orf72Q14CZ0 275 aa6.71□□□□□ -1.33
DMD-228ENST00000541735 IER5Q5VY09 327 aa6.71□□□□□ -1.33
DMD-228ENST00000541735 SCFD1Q8WVM8 642 aa6.71□□□□□ -1.33
DMD-228ENST00000541735 FAM136AQ96C01 138 aa6.71□□□□□ -1.33
DMD-228ENST00000541735 ACAD9Q9H845 621 aa6.71□□□□□ -1.33
DMD-228ENST00000541735 CBX8Q9HC52 389 aa6.71□□□□□ -1.33
DMD-228ENST00000541735 DDX56Q9NY93 547 aaKnown RBP6.71□□□□□ -1.33
DMD-228ENST00000541735 TLR7Q9NYK1 1049 aaKnown RBP6.71□□□□□ -1.33
DMD-228ENST00000541735 FBXO40Q9UH90 709 aa6.71□□□□□ -1.33
DMD-228ENST00000541735 GGT7Q9UJ14 662 aa6.71□□□□□ -1.33
DMD-228ENST00000541735 TOP2BQ02880 1626 aa6.71□□□□□ -1.33
DMD-228ENST00000541735 FAM47E-STBD1D6RA91 191 aa6.71□□□□□ -1.34
DMD-228ENST00000541735 TLR2O60603 784 aa6.71□□□□□ -1.34
DMD-228ENST00000541735 CKMP06732 381 aa6.71□□□□□ -1.34
DMD-228ENST00000541735 HPGDP15428 266 aa6.71□□□□□ -1.34
DMD-228ENST00000541735 KPNA2P52292 529 aaKnown RBP6.71□□□□□ -1.34
DMD-228ENST00000541735 FASTKD1Q53R41 847 aaKnown RBP6.71□□□□□ -1.34
DMD-228ENST00000541735 PLEKHM3Q6ZWE6 761 aa6.71□□□□□ -1.34
DMD-228ENST00000541735 TMTC1Q8IUR5 882 aa6.71□□□□□ -1.34
DMD-228ENST00000541735 FLCNQ8NFG4 579 aa6.71□□□□□ -1.34
DMD-228ENST00000541735 ADAM33Q9BZ11 813 aa6.71□□□□□ -1.34
DMD-228ENST00000541735 STARD7Q9NQZ5 370 aa6.71□□□□□ -1.34
DMD-228ENST00000541735 FEM1BQ9UK73 627 aa6.71□□□□□ -1.34
DMD-228ENST00000541735 NUDT14O95848 222 aa6.71□□□□□ -1.34
DMD-228ENST00000541735 PCCAP05165 728 aaPredicted RBP6.71□□□□□ -1.34
DMD-228ENST00000541735 LTKP29376 864 aa6.71□□□□□ -1.34
DMD-228ENST00000541735 INPP5BP32019 993 aa6.71□□□□□ -1.34
DMD-228ENST00000541735 ERFP50548 548 aa6.71□□□□□ -1.34
DMD-228ENST00000541735 TMEM132BQ14DG7 1078 aa6.71□□□□□ -1.34
DMD-228ENST00000541735 HLFQ16534 295 aa6.71□□□□□ -1.34
DMD-228ENST00000541735 CDR2LQ86X02 465 aaPredicted RBP6.71□□□□□ -1.34
DMD-228ENST00000541735 LRRC71Q8N4P6 559 aa6.71□□□□□ -1.34
DMD-228ENST00000541735 GIMAP8Q8ND71 665 aaPredicted RBP6.71□□□□□ -1.34
DMD-228ENST00000541735 TMEM260Q9NX78 707 aa6.71□□□□□ -1.34
DMD-228ENST00000541735 MSRAQ9UJ68 235 aa6.71□□□□□ -1.34
DMD-228ENST00000541735 SNX9Q9Y5X1 595 aa6.71□□□□□ -1.34
DMD-228ENST00000541735 PEG3Q9GZU2 1588 aa6.71□□□□□ -1.34
DMD-228ENST00000541735 ARAP1Q96P48 1450 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms