RNA–Protein interactions for RNA: ENST00000541029.1

ATN1-204, Transcript of atrophin 1, humanhuman

TSL 2

Gene ATN1, Length 855 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATN1-204ENST00000541029 TTC38Q5R3I4 469 aa22.33■■□□□ 1.17
ATN1-204ENST00000541029 KCNT2Q6UVM3 1135 aa22.33■■□□□ 1.17
ATN1-204ENST00000541029 SRGAP1Q7Z6B7 1085 aa22.33■■□□□ 1.17
ATN1-204ENST00000541029 NOSTRINQ8IVI9 506 aa22.33■■□□□ 1.17
ATN1-204ENST00000541029 PIGOQ8TEQ8 1089 aa22.33■■□□□ 1.17
ATN1-204ENST00000541029 CD320Q9NPF0 282 aa22.33■■□□□ 1.17
ATN1-204ENST00000541029 ANKEF1Q9NU02 776 aa22.33■■□□□ 1.17
ATN1-204ENST00000541029 RARRES1P49788 294 aa22.32■■□□□ 1.16
ATN1-204ENST00000541029 RAB27AP51159 221 aa22.32■■□□□ 1.16
ATN1-204ENST00000541029 ERVFC1P60507 584 aa22.32■■□□□ 1.16
ATN1-204ENST00000541029 NBR1Q14596 966 aa22.32■■□□□ 1.16
ATN1-204ENST00000541029 RBM23Q86U06 439 aaKnown RBP22.32■■□□□ 1.16
ATN1-204ENST00000541029 FAM178BQ8IXR5 827 aa22.32■■□□□ 1.16
ATN1-204ENST00000541029 ASAP3Q8TDY4 903 aa22.32■■□□□ 1.16
ATN1-204ENST00000541029 MRPL9Q9BYD2 267 aaKnown RBP22.32■■□□□ 1.16
ATN1-204ENST00000541029 FSCN2O14926 492 aa22.31■■□□□ 1.16
ATN1-204ENST00000541029 ST18O60284 1047 aa22.31■■□□□ 1.16
ATN1-204ENST00000541029 MED24O75448 989 aa22.31■■□□□ 1.16
ATN1-204ENST00000541029 DGAT1O75907 488 aa22.31■■□□□ 1.16
ATN1-204ENST00000541029 SPATA31C1P0DKV0 1188 aa22.31■■□□□ 1.16
ATN1-204ENST00000541029 PPM1AP35813 382 aa22.31■■□□□ 1.16
ATN1-204ENST00000541029 NDUFV1P49821 464 aa22.31■■□□□ 1.16
ATN1-204ENST00000541029 PLCB3Q01970 1234 aa22.31■■□□□ 1.16
ATN1-204ENST00000541029 ORC2Q13416 577 aaPredicted RBP22.31■■□□□ 1.16
ATN1-204ENST00000541029 ADAM15Q13444 863 aa22.31■■□□□ 1.16
ATN1-204ENST00000541029 PLPP4Q5VZY2 271 aa22.31■■□□□ 1.16
ATN1-204ENST00000541029 EFHBQ8N7U6 833 aa22.31■■□□□ 1.16
ATN1-204ENST00000541029 MICAL1Q8TDZ2 1067 aa22.31■■□□□ 1.16
ATN1-204ENST00000541029 MRPS27Q92552 414 aaKnown RBP22.31■■□□□ 1.16
ATN1-204ENST00000541029 INPP5FQ9Y2H2 1132 aa22.31■■□□□ 1.16
ATN1-204ENST00000541029 ASAP2O43150 1006 aa22.3■■□□□ 1.16
ATN1-204ENST00000541029 USO1O60763 962 aaKnown RBP22.3■■□□□ 1.16
ATN1-204ENST00000541029 CD2BP2O95400 341 aaKnown RBP22.3■■□□□ 1.16
ATN1-204ENST00000541029 GLP2RO95838 553 aa22.3■■□□□ 1.16
ATN1-204ENST00000541029 SKIP12755 728 aa22.3■■□□□ 1.16
ATN1-204ENST00000541029 TECP42680 631 aa22.3■■□□□ 1.16
ATN1-204ENST00000541029 CAPSQ13938 189 aa22.3■■□□□ 1.16
ATN1-204ENST00000541029 POTEGQ6S5H5 508 aa22.3■■□□□ 1.16
ATN1-204ENST00000541029 CATSPER3Q86XQ3 398 aa22.3■■□□□ 1.16
ATN1-204ENST00000541029 KHSRPQ92945 711 aaKnown RBP eCLIP22.3■■□□□ 1.16
ATN1-204ENST00000541029 TLE6Q9H808 572 aa22.3■■□□□ 1.16
ATN1-204ENST00000541029 TUFT1Q9NNX1 390 aa22.3■■□□□ 1.16
ATN1-204ENST00000541029 NOL7Q9UMY1 257 aaKnown RBP22.3■■□□□ 1.16
ATN1-204ENST00000541029 LZTS1Q9Y250 596 aa22.3■■□□□ 1.16
ATN1-204ENST00000541029 PCDHB2Q9Y5E7 798 aa22.3■■□□□ 1.16
ATN1-204ENST00000541029 ERLIN2O94905 339 aa22.29■■□□□ 1.16
ATN1-204ENST00000541029 HOXA11P31270 313 aaPredicted RBP22.29■■□□□ 1.16
ATN1-204ENST00000541029 TRAPPC10P48553 1259 aa22.29■■□□□ 1.16
ATN1-204ENST00000541029 PTENP60484 403 aa22.29■■□□□ 1.16
ATN1-204ENST00000541029 TFDP1Q14186 410 aa22.29■■□□□ 1.16
ATN1-204ENST00000541029 MXD4Q14582 209 aaPredicted RBP22.29■■□□□ 1.16
ATN1-204ENST00000541029 UBXN11Q5T124 520 aa22.29■■□□□ 1.16
ATN1-204ENST00000541029 GLB1LQ6UWU2 654 aa22.29■■□□□ 1.16
ATN1-204ENST00000541029 SLC39A11Q8N1S5 342 aa22.29■■□□□ 1.16
ATN1-204ENST00000541029 TCF25Q9BQ70 676 aa22.29■■□□□ 1.16
ATN1-204ENST00000541029 POLR3FQ9H1D9 316 aaPredicted RBP22.29■■□□□ 1.16
ATN1-204ENST00000541029 ENTPD7Q9NQZ7 604 aa22.29■■□□□ 1.16
ATN1-204ENST00000541029 TBC1D13Q9NVG8 400 aa22.29■■□□□ 1.16
ATN1-204ENST00000541029 SPG21Q9NZD8 308 aa22.29■■□□□ 1.16
ATN1-204ENST00000541029 CD207Q9UJ71 328 aa22.29■■□□□ 1.16
ATN1-204ENST00000541029 BARX2Q9UMQ3 279 aaPredicted RBP22.29■■□□□ 1.16
ATN1-204ENST00000541029 FAM50BQ9Y247 325 aa22.29■■□□□ 1.16
ATN1-204ENST00000541029 PER2O15055 1255 aa22.28■■□□□ 1.16
ATN1-204ENST00000541029 MBTPS2O43462 519 aa22.28■■□□□ 1.16
ATN1-204ENST00000541029 TSPAN1O60635 241 aa22.28■■□□□ 1.16
ATN1-204ENST00000541029 ZNF623O75123 536 aa22.28■■□□□ 1.16
ATN1-204ENST00000541029 ZC3H11AO75152 810 aaKnown RBP eCLIP22.28■■□□□ 1.16
ATN1-204ENST00000541029 GLRA2P23416 452 aa22.28■■□□□ 1.16
ATN1-204ENST00000541029 SSTR3P32745 418 aaPredicted RBP22.28■■□□□ 1.16
ATN1-204ENST00000541029 ARL2P36404 184 aa22.28■■□□□ 1.16
ATN1-204ENST00000541029 BCAR1P56945 870 aa22.28■■□□□ 1.16
ATN1-204ENST00000541029 RBM10P98175 930 aaKnown RBP22.28■■□□□ 1.16
ATN1-204ENST00000541029 SMAD4Q13485 552 aaKnown RBP22.28■■□□□ 1.16
ATN1-204ENST00000541029 GJD3Q8N144 294 aa22.28■■□□□ 1.16
ATN1-204ENST00000541029 MSLNLQ96KJ4 702 aa22.28■■□□□ 1.16
ATN1-204ENST00000541029 POLR3CQ9BUI4 534 aaPredicted RBP22.28■■□□□ 1.16
ATN1-204ENST00000541029 UPF2Q9HAU5 1272 aaKnown RBP22.28■■□□□ 1.16
ATN1-204ENST00000541029 CLEC1BQ9P126 229 aa22.28■■□□□ 1.16
ATN1-204ENST00000541029 NT5C1B-RDH14C9J2C7 533 aa22.27■■□□□ 1.16
ATN1-204ENST00000541029 INO80B-WBP1J3KQ70 363 aa22.27■■□□□ 1.16
ATN1-204ENST00000541029 U2AF2P26368 475 aaKnown RBP eCLIP22.27■■□□□ 1.163e-11■□□□□ 10.1
ATN1-204ENST00000541029 ZP2Q05996 745 aa22.27■■□□□ 1.16
ATN1-204ENST00000541029 MBTD1Q05BQ5 628 aa22.27■■□□□ 1.16
ATN1-204ENST00000541029 DUSP6Q16828 381 aa22.27■■□□□ 1.16
ATN1-204ENST00000541029 NOMO2Q5JPE7 1267 aa22.27■■□□□ 1.16
ATN1-204ENST00000541029 AGMOQ6ZNB7 445 aa22.27■■□□□ 1.16
ATN1-204ENST00000541029 TMEM173Q86WV6 379 aaPredicted RBP22.27■■□□□ 1.16
ATN1-204ENST00000541029 IFNLR1Q8IU57 520 aaPredicted RBP22.27■■□□□ 1.16
ATN1-204ENST00000541029 VN1R2Q8NFZ6 395 aa22.27■■□□□ 1.16
ATN1-204ENST00000541029 PGBD4Q96DM1 585 aa22.27■■□□□ 1.16
ATN1-204ENST00000541029 GPRC5CQ9NQ84 441 aa22.27■■□□□ 1.16
ATN1-204ENST00000541029 PUF60Q9UHX1 559 aaKnown RBP22.27■■□□□ 1.16
ATN1-204ENST00000541029 HIDE1A8MVS5 230 aa22.26■■□□□ 1.15
ATN1-204ENST00000541029 B4GALT3O60512 393 aa22.26■■□□□ 1.15
ATN1-204ENST00000541029 OFD1O75665 1012 aa22.26■■□□□ 1.15
ATN1-204ENST00000541029 TOB1P50616 345 aaPredicted RBP22.26■■□□□ 1.15
ATN1-204ENST00000541029 KRT17Q04695 432 aa22.26■■□□□ 1.15
ATN1-204ENST00000541029 SMAD2Q15796 467 aaKnown RBP22.26■■□□□ 1.15
ATN1-204ENST00000541029 PDE12Q6L8Q7 609 aaKnown RBP22.26■■□□□ 1.15
ATN1-204ENST00000541029 MAEAQ7L5Y9 396 aa22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms