RNA–Protein interactions for RNA: ENST00000540784.5

DDB1-218, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 1,119 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-218ENST00000540784 NTPCRQ9BSD7 190 aaKnown RBP17.12■□□□□ 0.33
DDB1-218ENST00000540784 GOLPH3LQ9H4A5 285 aa17.12■□□□□ 0.33
DDB1-218ENST00000540784 MINDY3Q9H8M7 445 aa17.12■□□□□ 0.33
DDB1-218ENST00000540784 PARVGQ9HBI0 331 aa17.12■□□□□ 0.33
DDB1-218ENST00000540784 KMT5AQ9NQR1 393 aa17.12■□□□□ 0.33
DDB1-218ENST00000540784 SLC4A7Q9Y6M7 1214 aa17.12■□□□□ 0.33
DDB1-218ENST00000540784 K7ERI5 159 aa17.11■□□□□ 0.33
DDB1-218ENST00000540784 ZNF202O95125 648 aa17.11■□□□□ 0.33
DDB1-218ENST00000540784 AFMP43652 599 aa17.11■□□□□ 0.33
DDB1-218ENST00000540784 KCNJ6P48051 423 aa17.11■□□□□ 0.33
DDB1-218ENST00000540784 PCBP1Q15365 356 aaKnown RBP eCLIP17.11■□□□□ 0.33
DDB1-218ENST00000540784 SPIRE2Q8WWL2 714 aa17.11■□□□□ 0.33
DDB1-218ENST00000540784 DNAJC19Q96DA6 116 aa17.11■□□□□ 0.33
DDB1-218ENST00000540784 PAGE5Q96GU1 130 aa17.11■□□□□ 0.33
DDB1-218ENST00000540784 GBP4Q96PP9 640 aa17.11■□□□□ 0.33
DDB1-218ENST00000540784 C7orf25Q9BPX7 421 aa17.11■□□□□ 0.33
DDB1-218ENST00000540784 TMX1Q9H3N1 280 aa17.11■□□□□ 0.33
DDB1-218ENST00000540784 CHST12Q9NRB3 414 aa17.11■□□□□ 0.33
DDB1-218ENST00000540784 CXXC1Q9P0U4 656 aaPredicted RBP17.11■□□□□ 0.33
DDB1-218ENST00000540784 ARID2Q68CP9 1835 aa17.1■□□□□ 0.33
DDB1-218ENST00000540784 SCN5AQ14524 2016 aa17.1■□□□□ 0.33
DDB1-218ENST00000540784 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.1■□□□□ 0.33
DDB1-218ENST00000540784 A0A1W2PPC1 479 aa17.1■□□□□ 0.33
DDB1-218ENST00000540784 DENND3A2RUS2 1198 aa17.1■□□□□ 0.33
DDB1-218ENST00000540784 SLC16A4O15374 487 aa17.1■□□□□ 0.33
DDB1-218ENST00000540784 ACTN4O43707 911 aaKnown RBP17.1■□□□□ 0.33
DDB1-218ENST00000540784 GADD45BO75293 160 aaPredicted RBP17.1■□□□□ 0.33
DDB1-218ENST00000540784 ERLIN2O94905 339 aa17.1■□□□□ 0.33
DDB1-218ENST00000540784 AMHP03971 560 aa17.1■□□□□ 0.33
DDB1-218ENST00000540784 IDEP14735 1019 aa17.1■□□□□ 0.33
DDB1-218ENST00000540784 ZNF131P52739 623 aa17.1■□□□□ 0.33
DDB1-218ENST00000540784 MBTD1Q05BQ5 628 aa17.1■□□□□ 0.33
DDB1-218ENST00000540784 MAPK6Q16659 721 aa17.1■□□□□ 0.33
DDB1-218ENST00000540784 RASIP1Q5U651 963 aa17.1■□□□□ 0.33
DDB1-218ENST00000540784 CDCA2Q69YH5 1023 aaPredicted RBP17.1■□□□□ 0.33
DDB1-218ENST00000540784 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.1■□□□□ 0.333e-18■■■■□ 24.6
DDB1-218ENST00000540784 RTN4RL1Q86UN2 441 aaPredicted RBP17.1■□□□□ 0.33
DDB1-218ENST00000540784 CNNM3Q8NE01 707 aa17.1■□□□□ 0.33
DDB1-218ENST00000540784 CCDC34Q96HJ3 373 aa17.1■□□□□ 0.33
DDB1-218ENST00000540784 ADAM2Q99965 735 aa17.1■□□□□ 0.33
DDB1-218ENST00000540784 PANK4Q9NVE7 773 aa17.1■□□□□ 0.33
DDB1-218ENST00000540784 CEP290O15078 2479 aa17.1■□□□□ 0.33
DDB1-218ENST00000540784 H0YCG3 227 aa17.09■□□□□ 0.33
DDB1-218ENST00000540784 TRAK2O60296 914 aa17.09■□□□□ 0.33
DDB1-218ENST00000540784 GAP43P17677 238 aa17.09■□□□□ 0.33
DDB1-218ENST00000540784 LIG1P18858 919 aa17.09■□□□□ 0.33
DDB1-218ENST00000540784 WDR5P61964 334 aaKnown RBP17.09■□□□□ 0.33
DDB1-218ENST00000540784 UBE2HP62256 183 aa17.09■□□□□ 0.33
DDB1-218ENST00000540784 FAM160A1Q05DH4 1040 aa17.09■□□□□ 0.33
DDB1-218ENST00000540784 HERC4Q5GLZ8 1057 aaPredicted RBP17.09■□□□□ 0.33
DDB1-218ENST00000540784 KANK3Q6NY19 840 aa17.09■□□□□ 0.33
DDB1-218ENST00000540784 CCDC65Q8IXS2 484 aa17.09■□□□□ 0.33
DDB1-218ENST00000540784 FMR1NBQ8N0W7 255 aaPredicted RBP17.09■□□□□ 0.33
DDB1-218ENST00000540784 PHOSPHO2Q8TCD6 241 aa17.09■□□□□ 0.33
DDB1-218ENST00000540784 KIFC3Q9BVG8 833 aa17.09■□□□□ 0.33
DDB1-218ENST00000540784 TRIM9Q9C026 710 aa17.09■□□□□ 0.33
DDB1-218ENST00000540784 TSPYL2Q9H2G4 693 aaPredicted RBP17.09■□□□□ 0.33
DDB1-218ENST00000540784 FZD8Q9H461 694 aa17.09■□□□□ 0.33
DDB1-218ENST00000540784 TMEM134Q9H6X4 195 aa17.09■□□□□ 0.33
DDB1-218ENST00000540784 RGS18Q9NS28 235 aa17.09■□□□□ 0.33
DDB1-218ENST00000540784 PRMT7Q9NVM4 692 aaPredicted RBP17.09■□□□□ 0.33
DDB1-218ENST00000540784 DACT1Q9NYF0 836 aa17.09■□□□□ 0.33
DDB1-218ENST00000540784 LOXHD1Q8IVV2 1947 aa17.08■□□□□ 0.33
DDB1-218ENST00000540784 TANC1Q9C0D5 1861 aa17.08■□□□□ 0.33
DDB1-218ENST00000540784 PHLPP2Q6ZVD8 1323 aa17.08■□□□□ 0.32
DDB1-218ENST00000540784 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.08■□□□□ 0.32
DDB1-218ENST00000540784 MGEA5O60502 916 aa17.08■□□□□ 0.32
DDB1-218ENST00000540784 AXLP30530 894 aa17.08■□□□□ 0.32
DDB1-218ENST00000540784 DSC3Q14574 896 aa17.08■□□□□ 0.32
DDB1-218ENST00000540784 CNNM4Q6P4Q7 775 aa17.08■□□□□ 0.32
DDB1-218ENST00000540784 KRBA2Q6ZNG9 492 aa17.08■□□□□ 0.32
DDB1-218ENST00000540784 FAM178BQ8IXR5 827 aa17.08■□□□□ 0.32
DDB1-218ENST00000540784 ENGASEQ8NFI3 743 aa17.08■□□□□ 0.32
DDB1-218ENST00000540784 BLZF1Q9H2G9 400 aa17.08■□□□□ 0.32
DDB1-218ENST00000540784 C1orf112Q9NSG2 853 aa17.08■□□□□ 0.32
DDB1-218ENST00000540784 RNF216Q9NWF9 866 aaPredicted RBP17.08■□□□□ 0.32
DDB1-218ENST00000540784 SEL1LQ9UBV2 794 aa17.08■□□□□ 0.32
DDB1-218ENST00000540784 PIN4Q9Y237 131 aaKnown RBP17.08■□□□□ 0.32
DDB1-218ENST00000540784 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.07■□□□□ 0.32
DDB1-218ENST00000540784 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.07■□□□□ 0.32
DDB1-218ENST00000540784 ACKR2O00590 384 aa17.07■□□□□ 0.32
DDB1-218ENST00000540784 TSPAN1O60635 241 aa17.07■□□□□ 0.32
DDB1-218ENST00000540784 PRKCBP05771 671 aa17.07■□□□□ 0.32
DDB1-218ENST00000540784 ATP2A2P16615 1042 aaKnown RBP17.07■□□□□ 0.32
DDB1-218ENST00000540784 SCP2P22307 547 aa17.07■□□□□ 0.32
DDB1-218ENST00000540784 HOXA11P31270 313 aaPredicted RBP17.07■□□□□ 0.32
DDB1-218ENST00000540784 ASIC1P78348 528 aa17.07■□□□□ 0.32
DDB1-218ENST00000540784 FAM189BP81408 668 aa17.07■□□□□ 0.32
DDB1-218ENST00000540784 STRN3Q13033 797 aa17.07■□□□□ 0.32
DDB1-218ENST00000540784 PRPF4BQ13523 1007 aaKnown RBP17.07■□□□□ 0.32
DDB1-218ENST00000540784 SNW1Q13573 536 aaKnown RBP17.07■□□□□ 0.32
DDB1-218ENST00000540784 CUL4BQ13620 913 aa17.07■□□□□ 0.32
DDB1-218ENST00000540784 FAM187BQ17R55 369 aa17.07■□□□□ 0.32
DDB1-218ENST00000540784 TMEM132AQ24JP5 1023 aa17.07■□□□□ 0.32
DDB1-218ENST00000540784 TWF2Q6IBS0 349 aaKnown RBP17.07■□□□□ 0.32
DDB1-218ENST00000540784 PPP4R3CPQ6ZMV5 832 aa17.07■□□□□ 0.32
DDB1-218ENST00000540784 SLC24A5Q71RS6 500 aa17.07■□□□□ 0.32
DDB1-218ENST00000540784 HAUS6Q7Z4H7 955 aa17.07■□□□□ 0.32
DDB1-218ENST00000540784 GRAMD1CQ8IYS0 662 aa17.07■□□□□ 0.32
DDB1-218ENST00000540784 MYOCDQ8IZQ8 938 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms