RNA–Protein interactions for RNA: ENST00000540415.1

LRP6-204, Transcript of LDL receptor related protein 6, humanhuman

TSL 5

Gene LRP6, Length 473 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-204ENST00000540415 SPATA6Q9NWH7 488 aaPredicted RBP9.06□□□□□ -0.96
LRP6-204ENST00000540415 USP18Q9UMW8 372 aa9.06□□□□□ -0.96
LRP6-204ENST00000540415 SMG5Q9UPR3 1016 aaKnown RBP9.06□□□□□ -0.96
LRP6-204ENST00000540415 U3KPZ7 1027 aaPredicted RBP9.06□□□□□ -0.96
LRP6-204ENST00000540415 ASPMQ8IZT6 3477 aa9.06□□□□□ -0.96
LRP6-204ENST00000540415 ATRXP46100 2492 aa9.06□□□□□ -0.96
LRP6-204ENST00000540415 ZZEF1O43149 2961 aa9.05□□□□□ -0.96
LRP6-204ENST00000540415 TMEM150BA6NC51 233 aa9.05□□□□□ -0.96
LRP6-204ENST00000540415 ANHXE9PGG2 379 aa9.05□□□□□ -0.96
LRP6-204ENST00000540415 IPO5O00410 1097 aaKnown RBP9.05□□□□□ -0.96
LRP6-204ENST00000540415 SH2B2O14492 632 aaPredicted RBP9.05□□□□□ -0.96
LRP6-204ENST00000540415 TEX28O15482 410 aa9.05□□□□□ -0.96
LRP6-204ENST00000540415 PRC1O43663 620 aa9.05□□□□□ -0.96
LRP6-204ENST00000540415 LAMP2P13473 410 aa9.05□□□□□ -0.96
LRP6-204ENST00000540415 ZNF76P36508 570 aa9.05□□□□□ -0.96
LRP6-204ENST00000540415 SREBF1P36956 1147 aa9.05□□□□□ -0.96
LRP6-204ENST00000540415 AK2P54819 239 aa9.05□□□□□ -0.96
LRP6-204ENST00000540415 NAPAP54920 295 aa9.05□□□□□ -0.96
LRP6-204ENST00000540415 RNASELQ05823 741 aaKnown RBP9.05□□□□□ -0.96
LRP6-204ENST00000540415 UGCGQ16739 394 aa9.05□□□□□ -0.96
LRP6-204ENST00000540415 TWF2Q6IBS0 349 aaKnown RBP9.05□□□□□ -0.96
LRP6-204ENST00000540415 PARM1Q6UWI2 310 aa9.05□□□□□ -0.96
LRP6-204ENST00000540415 GLB1LQ6UWU2 654 aa9.05□□□□□ -0.96
LRP6-204ENST00000540415 NFXL1Q6ZNB6 911 aa9.05□□□□□ -0.96
LRP6-204ENST00000540415 TMTC3Q6ZXV5 915 aa9.05□□□□□ -0.96
LRP6-204ENST00000540415 SMC5Q8IY18 1101 aa9.05□□□□□ -0.96
LRP6-204ENST00000540415 FGF14Q92915 247 aa9.05□□□□□ -0.96
LRP6-204ENST00000540415 B3GALT6Q96L58 329 aa9.05□□□□□ -0.96
LRP6-204ENST00000540415 SH2D3AQ9BRG2 576 aa9.05□□□□□ -0.96
LRP6-204ENST00000540415 LRRC2Q9BYS8 371 aa9.05□□□□□ -0.96
LRP6-204ENST00000540415 RIC8AQ9NPQ8 531 aa9.05□□□□□ -0.96
LRP6-204ENST00000540415 MARCH5Q9NX47 278 aa9.05□□□□□ -0.96
LRP6-204ENST00000540415 CDV3Q9UKY7 258 aaKnown RBP9.05□□□□□ -0.96
LRP6-204ENST00000540415 PRG3Q9Y2Y8 225 aaPredicted RBP9.05□□□□□ -0.96
LRP6-204ENST00000540415 CEP295Q9C0D2 2601 aa9.05□□□□□ -0.96
LRP6-204ENST00000540415 SPEGQ15772 3267 aa9.05□□□□□ -0.96
LRP6-204ENST00000540415 C2orf16Q68DN1 1984 aa9.04□□□□□ -0.96
LRP6-204ENST00000540415 A0A087WZ62 844 aa9.04□□□□□ -0.96
LRP6-204ENST00000540415 NRP1O14786 923 aa9.04□□□□□ -0.96
LRP6-204ENST00000540415 SPTLC1O15269 473 aa9.04□□□□□ -0.96
LRP6-204ENST00000540415 MAGEB2O15479 319 aa9.04□□□□□ -0.96
LRP6-204ENST00000540415 LAMTOR5O43504 91 aa9.04□□□□□ -0.96
LRP6-204ENST00000540415 IGHDP01880 384 aa9.04□□□□□ -0.96
LRP6-204ENST00000540415 HOXB3P14651 431 aaPredicted RBP9.04□□□□□ -0.96
LRP6-204ENST00000540415 GSPT1P15170 499 aaKnown RBP9.04□□□□□ -0.96
LRP6-204ENST00000540415 GNAQP50148 359 aa9.04□□□□□ -0.96
LRP6-204ENST00000540415 STARD6P59095 220 aa9.04□□□□□ -0.96
LRP6-204ENST00000540415 NTHL1P78549 312 aa9.04□□□□□ -0.96
LRP6-204ENST00000540415 NUCB1Q02818 461 aa9.04□□□□□ -0.96
LRP6-204ENST00000540415 UBXN2BQ14CS0 331 aa9.04□□□□□ -0.96
LRP6-204ENST00000540415 NONOQ15233 471 aaKnown RBP eCLIP9.04□□□□□ -0.96
LRP6-204ENST00000540415 LPAL2Q16609 132 aa9.04□□□□□ -0.96
LRP6-204ENST00000540415 JAKMIP3Q5VZ66 844 aa9.04□□□□□ -0.96
LRP6-204ENST00000540415 AGMOQ6ZNB7 445 aa9.04□□□□□ -0.96
LRP6-204ENST00000540415 PALB2Q86YC2 1186 aa9.04□□□□□ -0.96
LRP6-204ENST00000540415 GLYCTKQ8IVS8 523 aa9.04□□□□□ -0.96
LRP6-204ENST00000540415 CHAMP1Q96JM3 812 aa9.04□□□□□ -0.96
LRP6-204ENST00000540415 RPS6KC1Q96S38 1066 aa9.04□□□□□ -0.96
LRP6-204ENST00000540415 FDXACB1Q9BRP7 624 aaPredicted RBP9.04□□□□□ -0.96
LRP6-204ENST00000540415 ZNF577Q9BSK1 485 aa9.04□□□□□ -0.96
LRP6-204ENST00000540415 SLC2A4RGQ9NR83 387 aa9.04□□□□□ -0.96
LRP6-204ENST00000540415 MRPL17Q9NRX2 175 aaKnown RBP9.04□□□□□ -0.96
LRP6-204ENST00000540415 FAM105AQ9NUU6 356 aa9.04□□□□□ -0.96
LRP6-204ENST00000540415 DACT1Q9NYF0 836 aa9.04□□□□□ -0.96
LRP6-204ENST00000540415 PIN4Q9Y237 131 aaKnown RBP9.04□□□□□ -0.96
LRP6-204ENST00000540415 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.04□□□□□ -0.96
LRP6-204ENST00000540415 CACNA1IQ9P0X4 2223 aa9.04□□□□□ -0.96
LRP6-204ENST00000540415 CNTNAP5Q8WYK1 1306 aa9.04□□□□□ -0.96
LRP6-204ENST00000540415 KANSL1LA0AUZ9 987 aa9.03□□□□□ -0.96
LRP6-204ENST00000540415 CCDC69A6NI79 296 aa9.03□□□□□ -0.96
LRP6-204ENST00000540415 PRR5-ARHGAP8B1AHC4 643 aa9.03□□□□□ -0.96
LRP6-204ENST00000540415 GLUD1P00367 558 aa9.03□□□□□ -0.96
LRP6-204ENST00000540415 POMCP01189 267 aa9.03□□□□□ -0.96
LRP6-204ENST00000540415 SOD2P04179 222 aa9.03□□□□□ -0.96
LRP6-204ENST00000540415 OATP04181 439 aa9.03□□□□□ -0.96
LRP6-204ENST00000540415 URODP06132 367 aa9.03□□□□□ -0.96
LRP6-204ENST00000540415 PSAPP07602 524 aa9.03□□□□□ -0.96
LRP6-204ENST00000540415 TMOD1P28289 359 aa9.03□□□□□ -0.96
LRP6-204ENST00000540415 CLK2P49760 499 aaKnown RBP9.03□□□□□ -0.96
LRP6-204ENST00000540415 ADCY7P51828 1080 aa9.03□□□□□ -0.96
LRP6-204ENST00000540415 ARHGAP8P85298 464 aa9.03□□□□□ -0.96
LRP6-204ENST00000540415 PRKCEQ02156 737 aa9.03□□□□□ -0.96
LRP6-204ENST00000540415 LMNB2Q03252 620 aa9.03□□□□□ -0.96
LRP6-204ENST00000540415 COL9A2Q14055 689 aaPredicted RBP9.03□□□□□ -0.96
LRP6-204ENST00000540415 ZNF528Q3MIS6 628 aa9.03□□□□□ -0.96
LRP6-204ENST00000540415 PPM1JQ5JR12 505 aa9.03□□□□□ -0.96
LRP6-204ENST00000540415 ZNF746Q6NUN9 644 aaPredicted RBP9.03□□□□□ -0.96
LRP6-204ENST00000540415 NIPA1Q7RTP0 329 aa9.03□□□□□ -0.96
LRP6-204ENST00000540415 MICU3Q86XE3 530 aa9.03□□□□□ -0.96
LRP6-204ENST00000540415 KSR1Q8IVT5 923 aa9.03□□□□□ -0.96
LRP6-204ENST00000540415 ZBTB44Q8NCP5 570 aa9.03□□□□□ -0.96
LRP6-204ENST00000540415 ATRIPQ8WXE1 791 aa9.03□□□□□ -0.96
LRP6-204ENST00000540415 CRYGNQ8WXF5 182 aa9.03□□□□□ -0.96
LRP6-204ENST00000540415 STAMQ92783 540 aa9.03□□□□□ -0.96
LRP6-204ENST00000540415 GJA10Q969M2 543 aa9.03□□□□□ -0.96
LRP6-204ENST00000540415 RTKNQ9BST9 563 aa9.03□□□□□ -0.96
LRP6-204ENST00000540415 DDX23Q9BUQ8 820 aaKnown RBP9.03□□□□□ -0.96
LRP6-204ENST00000540415 HERC2P3Q9BVR0 1158 aa9.03□□□□□ -0.96
LRP6-204ENST00000540415 NT5C3AQ9H0P0 336 aa9.03□□□□□ -0.96
LRP6-204ENST00000540415 EPC1Q9H2F5 836 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms