RNA–Protein interactions for RNA: ENST00000539563.5

LSAMP-207, Transcript of limbic system associated membrane protein, humanhuman

TSL 3 BASIC

Gene LSAMP, Length 8,821 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-207ENST00000539563 A0A1W2PQC6 194 aa6.91□□□□□ -1.3
LSAMP-207ENST00000539563 TRIP13Q15645 432 aaPredicted RBP6.91□□□□□ -1.3
LSAMP-207ENST00000539563 FAM133BQ5BKY9 247 aaKnown RBP6.91□□□□□ -1.3
LSAMP-207ENST00000539563 SLC10A5Q5PT55 438 aa6.91□□□□□ -1.3
LSAMP-207ENST00000539563 SNRNP48Q6IEG0 339 aaKnown RBP6.91□□□□□ -1.3
LSAMP-207ENST00000539563 EDEM3Q9BZQ6 932 aa6.91□□□□□ -1.3
LSAMP-207ENST00000539563 MAP3K20Q9NYL2 800 aaKnown RBP6.91□□□□□ -1.3
LSAMP-207ENST00000539563 ABCA9Q8IUA7 1624 aa6.91□□□□□ -1.3
LSAMP-207ENST00000539563 ACSL3O95573 720 aa6.91□□□□□ -1.3
LSAMP-207ENST00000539563 PRDX5P30044 214 aa6.91□□□□□ -1.3
LSAMP-207ENST00000539563 NNMTP40261 264 aa6.91□□□□□ -1.3
LSAMP-207ENST00000539563 MFSD14CQ5VZR4 134 aa6.91□□□□□ -1.3
LSAMP-207ENST00000539563 SYDE1Q6ZW31 735 aaPredicted RBP6.91□□□□□ -1.3
LSAMP-207ENST00000539563 SUN2Q9UH99 717 aa6.91□□□□□ -1.3
LSAMP-207ENST00000539563 PLAAQ9Y263 795 aa6.91□□□□□ -1.3
LSAMP-207ENST00000539563 CYP2D6P10635 497 aa6.91□□□□□ -1.3
LSAMP-207ENST00000539563 SLCO1A2P46721 670 aa6.91□□□□□ -1.3
LSAMP-207ENST00000539563 RHPN2Q8IUC4 686 aa6.91□□□□□ -1.3
LSAMP-207ENST00000539563 EFHBQ8N7U6 833 aa6.91□□□□□ -1.3
LSAMP-207ENST00000539563 ZNF564Q8TBZ8 553 aaPredicted RBP6.91□□□□□ -1.3
LSAMP-207ENST00000539563 FAM49AQ9H0Q0 323 aaPredicted RBP6.91□□□□□ -1.3
LSAMP-207ENST00000539563 ATF5Q9Y2D1 282 aaPredicted RBP6.91□□□□□ -1.3
LSAMP-207ENST00000539563 CHRNA3P32297 505 aa6.91□□□□□ -1.3
LSAMP-207ENST00000539563 CLCN6P51797 869 aa6.91□□□□□ -1.3
LSAMP-207ENST00000539563 TRIM28Q13263 835 aaKnown RBP6.91□□□□□ -1.3
LSAMP-207ENST00000539563 IMPG1Q17R60 797 aa6.91□□□□□ -1.3
LSAMP-207ENST00000539563 KRT80Q6KB66 452 aa6.91□□□□□ -1.3
LSAMP-207ENST00000539563 GPD1LQ8N335 351 aa6.91□□□□□ -1.3
LSAMP-207ENST00000539563 SYT2Q8N9I0 419 aaPredicted RBP6.91□□□□□ -1.3
LSAMP-207ENST00000539563 CHAMP1Q96JM3 812 aa6.91□□□□□ -1.3
LSAMP-207ENST00000539563 MMTAG2Q9BU76 263 aaKnown RBP6.91□□□□□ -1.3
LSAMP-207ENST00000539563 NUP85Q9BW27 656 aa6.91□□□□□ -1.3
LSAMP-207ENST00000539563 TMEM60Q9H2L4 133 aa6.91□□□□□ -1.3
LSAMP-207ENST00000539563 ACAD9Q9H845 621 aa6.91□□□□□ -1.3
LSAMP-207ENST00000539563 ABCB6Q9NP58 842 aa6.91□□□□□ -1.3
LSAMP-207ENST00000539563 RNF146Q9NTX7 359 aa6.91□□□□□ -1.3
LSAMP-207ENST00000539563 APOBEC2Q9Y235 224 aaKnown RBP6.91□□□□□ -1.3
LSAMP-207ENST00000539563 FARP1Q9Y4F1 1045 aaPredicted RBP6.91□□□□□ -1.3
LSAMP-207ENST00000539563 CYP27B1O15528 508 aa6.9□□□□□ -1.3
LSAMP-207ENST00000539563 RPSAP08865 295 aaKnown RBP6.9□□□□□ -1.3
LSAMP-207ENST00000539563 SWSAP1Q6NVH7 229 aa6.9□□□□□ -1.3
LSAMP-207ENST00000539563 SGMS1Q86VZ5 419 aa6.9□□□□□ -1.3
LSAMP-207ENST00000539563 RHOT1Q8IXI2 618 aa6.9□□□□□ -1.3
LSAMP-207ENST00000539563 OSBPL9Q96SU4 736 aa6.9□□□□□ -1.3
LSAMP-207ENST00000539563 PPP1R16BQ96T49 567 aa6.9□□□□□ -1.3
LSAMP-207ENST00000539563 KCNQ4P56696 695 aa6.9□□□□□ -1.3
LSAMP-207ENST00000539563 CYP27A1Q02318 531 aa6.9□□□□□ -1.3
LSAMP-207ENST00000539563 TXNRD1Q16881 649 aa6.9□□□□□ -1.3
LSAMP-207ENST00000539563 TMEM270Q6UE05 265 aa6.9□□□□□ -1.3
LSAMP-207ENST00000539563 MB21D2Q8IYB1 491 aaPredicted RBP6.9□□□□□ -1.3
LSAMP-207ENST00000539563 OSBPL5Q9H0X9 879 aaPredicted RBP6.9□□□□□ -1.3
LSAMP-207ENST00000539563 EIF2AK3Q9NZJ5 1116 aaKnown RBP6.9□□□□□ -1.3
LSAMP-207ENST00000539563 GABBR1Q9UBS5 961 aa6.9□□□□□ -1.3
LSAMP-207ENST00000539563 KDM6AO15550 1401 aaPredicted RBP6.9□□□□□ -1.3
LSAMP-207ENST00000539563 GCLMP48507 274 aa6.9□□□□□ -1.3
LSAMP-207ENST00000539563 DHX34Q14147 1143 aaKnown RBP6.9□□□□□ -1.3
LSAMP-207ENST00000539563 PDIA5Q14554 519 aa6.9□□□□□ -1.3
LSAMP-207ENST00000539563 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.9□□□□□ -1.3
LSAMP-207ENST00000539563 THNSL1Q8IYQ7 743 aa6.9□□□□□ -1.3
LSAMP-207ENST00000539563 SH3TC2Q8TF17 1288 aa6.9□□□□□ -1.3
LSAMP-207ENST00000539563 CENPKQ9BS16 269 aa6.9□□□□□ -1.3
LSAMP-207ENST00000539563 RBAKQ9NYW8 714 aaPredicted RBP6.9□□□□□ -1.3
LSAMP-207ENST00000539563 A0A087WWV3 80 aa6.9□□□□□ -1.3
LSAMP-207ENST00000539563 POTEMA6NI47 508 aa6.9□□□□□ -1.3
LSAMP-207ENST00000539563 USP17L15C9J2P7 530 aa6.9□□□□□ -1.3
LSAMP-207ENST00000539563 RASA4BC9J798 803 aa6.9□□□□□ -1.3
LSAMP-207ENST00000539563 USP17L13C9JLJ4 530 aa6.9□□□□□ -1.3
LSAMP-207ENST00000539563 USP17L11C9JVI0 530 aa6.9□□□□□ -1.3
LSAMP-207ENST00000539563 USP17L18D6R9N7 530 aa6.9□□□□□ -1.3
LSAMP-207ENST00000539563 USP17L22D6RA61 530 aa6.9□□□□□ -1.3
LSAMP-207ENST00000539563 USP17L17D6RBQ6 530 aa6.9□□□□□ -1.3
LSAMP-207ENST00000539563 USP17L19D6RCP7 530 aa6.9□□□□□ -1.3
LSAMP-207ENST00000539563 USP17L20D6RJB6 530 aa6.9□□□□□ -1.3
LSAMP-207ENST00000539563 H3BRJ5 948 aa6.9□□□□□ -1.3
LSAMP-207ENST00000539563 RASA4O43374 803 aa6.9□□□□□ -1.3
LSAMP-207ENST00000539563 RTN2O75298 545 aa6.9□□□□□ -1.3
LSAMP-207ENST00000539563 FTLP02792 175 aaPredicted RBP6.9□□□□□ -1.3
LSAMP-207ENST00000539563 STAT3P40763 770 aa6.9□□□□□ -1.3
LSAMP-207ENST00000539563 DMTNQ08495 405 aa6.9□□□□□ -1.3
LSAMP-207ENST00000539563 USP17L24Q0WX57 530 aa6.9□□□□□ -1.3
LSAMP-207ENST00000539563 DRAP1Q14919 205 aaPredicted RBP6.9□□□□□ -1.3
LSAMP-207ENST00000539563 EPHA7Q15375 998 aa6.9□□□□□ -1.3
LSAMP-207ENST00000539563 PASD1Q8IV76 773 aa6.9□□□□□ -1.3
LSAMP-207ENST00000539563 RNF168Q8IYW5 571 aaPredicted RBP6.9□□□□□ -1.3
LSAMP-207ENST00000539563 GPR101Q96P66 508 aaPredicted RBP6.9□□□□□ -1.3
LSAMP-207ENST00000539563 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.9□□□□□ -1.3
LSAMP-207ENST00000539563 ZBED2Q9BTP6 218 aa6.9□□□□□ -1.3
LSAMP-207ENST00000539563 PLA2G12BQ9BX93 195 aa6.9□□□□□ -1.3
LSAMP-207ENST00000539563 TEX12Q9BXU0 123 aa6.9□□□□□ -1.3
LSAMP-207ENST00000539563 HEY1Q9Y5J3 304 aa6.9□□□□□ -1.3
LSAMP-207ENST00000539563 POTEB3A0JP26 581 aa6.9□□□□□ -1.31
LSAMP-207ENST00000539563 GSG1L2A8MUP6 293 aa6.9□□□□□ -1.31
LSAMP-207ENST00000539563 POTECB2RU33 542 aa6.9□□□□□ -1.31
LSAMP-207ENST00000539563 PPP1R12AO14974 1030 aaPredicted RBP6.9□□□□□ -1.31
LSAMP-207ENST00000539563 SLC16A4O15374 487 aa6.9□□□□□ -1.31
LSAMP-207ENST00000539563 EFNA5P52803 228 aa6.9□□□□□ -1.31
LSAMP-207ENST00000539563 PMS2P54278 862 aa6.9□□□□□ -1.31
LSAMP-207ENST00000539563 TMPRSS15P98073 1019 aa6.9□□□□□ -1.31
LSAMP-207ENST00000539563 MDM2Q00987 491 aaPredicted RBP6.9□□□□□ -1.31
LSAMP-207ENST00000539563 TBCCQ15814 346 aa6.9□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms