RNA–Protein interactions for RNA: ENST00000538827.5

CD4-208, Transcript of CD4 molecule, humanhuman

TSL 1 (best)

Gene CD4, Length 985 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-208ENST00000538827 ZMYM2Q9UBW7 1377 aa15.55■□□□□ 0.08
CD4-208ENST00000538827 DENND3A2RUS2 1198 aa15.55■□□□□ 0.08
CD4-208ENST00000538827 H0YCG3 227 aa15.55■□□□□ 0.08
CD4-208ENST00000538827 CABYRO75952 493 aa15.55■□□□□ 0.08
CD4-208ENST00000538827 VTNP04004 478 aa15.55■□□□□ 0.08
CD4-208ENST00000538827 SRGAP2CP0DJJ0 459 aa15.55■□□□□ 0.08
CD4-208ENST00000538827 GNAT1P11488 350 aa15.55■□□□□ 0.08
CD4-208ENST00000538827 PMS1P54277 932 aaKnown RBP15.55■□□□□ 0.08
CD4-208ENST00000538827 ZNF200P98182 395 aaPredicted RBP15.55■□□□□ 0.08
CD4-208ENST00000538827 LAMTOR4Q0VGL1 99 aa15.55■□□□□ 0.08
CD4-208ENST00000538827 MXD4Q14582 209 aaPredicted RBP15.55■□□□□ 0.08
CD4-208ENST00000538827 HSP90AA4PQ58FG1 418 aa15.55■□□□□ 0.08
CD4-208ENST00000538827 MARCH8Q5T0T0 291 aa15.55■□□□□ 0.08
CD4-208ENST00000538827 CCSAPQ6IQ19 270 aaPredicted RBP15.55■□□□□ 0.08
CD4-208ENST00000538827 RUFY4Q6ZNE9 571 aa15.55■□□□□ 0.08
CD4-208ENST00000538827 ZNF720Q7Z2F6 126 aa15.55■□□□□ 0.08
CD4-208ENST00000538827 NECAB2Q7Z6G3 386 aa15.55■□□□□ 0.08
CD4-208ENST00000538827 ZBTB8OSQ8IWT0 167 aa15.55■□□□□ 0.08
CD4-208ENST00000538827 SPIRE2Q8WWL2 714 aa15.55■□□□□ 0.08
CD4-208ENST00000538827 GLT1D1Q96MS3 346 aa15.55■□□□□ 0.08
CD4-208ENST00000538827 ACCSQ96QU6 501 aa15.55■□□□□ 0.08
CD4-208ENST00000538827 TSEN34Q9BSV6 310 aaKnown RBP15.55■□□□□ 0.08
CD4-208ENST00000538827 NFE2L3Q9Y4A8 694 aa15.55■□□□□ 0.08
CD4-208ENST00000538827 VCANP13611 3396 aa15.55■□□□□ 0.08
CD4-208ENST00000538827 PHLPP2Q6ZVD8 1323 aa15.54■□□□□ 0.08
CD4-208ENST00000538827 A0A1W2PQ45 241 aaPredicted RBP15.54■□□□□ 0.08
CD4-208ENST00000538827 A0A1W2PQY0 241 aa15.54■□□□□ 0.08
CD4-208ENST00000538827 IKBKBO14920 756 aa15.54■□□□□ 0.08
CD4-208ENST00000538827 TREHO43280 583 aa15.54■□□□□ 0.08
CD4-208ENST00000538827 STRN3Q13033 797 aa15.54■□□□□ 0.08
CD4-208ENST00000538827 HIC1Q14526 733 aa15.54■□□□□ 0.08
CD4-208ENST00000538827 BMT2Q1RMZ1 405 aa15.54■□□□□ 0.08
CD4-208ENST00000538827 SPATA1Q5VX52 437 aa15.54■□□□□ 0.08
CD4-208ENST00000538827 FAM109BQ6ICB4 259 aaPredicted RBP15.54■□□□□ 0.08
CD4-208ENST00000538827 LINC01465Q8N7H1 131 aa15.54■□□□□ 0.08
CD4-208ENST00000538827 RNF149Q8NC42 400 aa15.54■□□□□ 0.08
CD4-208ENST00000538827 TMEM161BQ8NDZ6 487 aa15.54■□□□□ 0.08
CD4-208ENST00000538827 ENOX1Q8TC92 643 aaKnown RBP15.54■□□□□ 0.08
CD4-208ENST00000538827 ZNF507Q8TCN5 953 aa15.54■□□□□ 0.08
CD4-208ENST00000538827 NLRP7Q8WX94 980 aa15.54■□□□□ 0.08
CD4-208ENST00000538827 HVCN1Q96D96 273 aa15.54■□□□□ 0.08
CD4-208ENST00000538827 BICD1Q96G01 975 aa15.54■□□□□ 0.08
CD4-208ENST00000538827 SEMA6BQ9H3T3 888 aa15.54■□□□□ 0.08
CD4-208ENST00000538827 STARD7Q9NQZ5 370 aa15.54■□□□□ 0.08
CD4-208ENST00000538827 GTF2IRD1Q9UHL9 959 aa15.54■□□□□ 0.08
CD4-208ENST00000538827 DNM1LO00429 736 aa15.53■□□□□ 0.08
CD4-208ENST00000538827 CALUO43852 315 aaPredicted RBP15.53■□□□□ 0.08
CD4-208ENST00000538827 PPP1R37O75864 691 aa15.53■□□□□ 0.08
CD4-208ENST00000538827 MRE11P49959 708 aa15.53■□□□□ 0.08
CD4-208ENST00000538827 LRRC63Q05C16 580 aa15.53■□□□□ 0.08
CD4-208ENST00000538827 KCNA1Q09470 495 aa15.53■□□□□ 0.08
CD4-208ENST00000538827 TMEM62Q0P6H9 643 aa15.53■□□□□ 0.08
CD4-208ENST00000538827 ITGA7Q13683 1181 aa15.53■□□□□ 0.08
CD4-208ENST00000538827 NCAPHQ15003 741 aa15.53■□□□□ 0.08
CD4-208ENST00000538827 KNOP1Q1ED39 458 aaKnown RBP15.53■□□□□ 0.08
CD4-208ENST00000538827 ANKRD40Q6AI12 368 aa15.53■□□□□ 0.08
CD4-208ENST00000538827 GDF6Q6KF10 455 aaPredicted RBP15.53■□□□□ 0.08
CD4-208ENST00000538827 TTI2Q6NXR4 508 aa15.53■□□□□ 0.08
CD4-208ENST00000538827 PAWRQ96IZ0 340 aaKnown RBP15.53■□□□□ 0.08
CD4-208ENST00000538827 C2orf40Q9H1Z8 148 aa15.53■□□□□ 0.08
CD4-208ENST00000538827 IKZF4Q9H2S9 585 aa15.53■□□□□ 0.08
CD4-208ENST00000538827 TYW1Q9NV66 732 aaKnown RBP15.53■□□□□ 0.08
CD4-208ENST00000538827 ARHGAP28Q9P2N2 729 aa15.53■□□□□ 0.08
CD4-208ENST00000538827 KCNG1Q9UIX4 513 aa15.53■□□□□ 0.08
CD4-208ENST00000538827 EXOC7Q9UPT5 735 aa15.53■□□□□ 0.08
CD4-208ENST00000538827 PHF24Q9UPV7 400 aa15.53■□□□□ 0.08
CD4-208ENST00000538827 NOD1Q9Y239 953 aa15.53■□□□□ 0.08
CD4-208ENST00000538827 A0A0U1RQG5 324 aaPredicted RBP15.52■□□□□ 0.08
CD4-208ENST00000538827 SMIM35A0A1B0GVV1 85 aa15.52■□□□□ 0.08
CD4-208ENST00000538827 MBLAC1A4D2B0 266 aaPredicted RBP15.52■□□□□ 0.08
CD4-208ENST00000538827 HOXD13P35453 343 aa15.52■□□□□ 0.08
CD4-208ENST00000538827 PHKA2P46019 1235 aa15.52■□□□□ 0.08
CD4-208ENST00000538827 GTF2BQ00403 316 aa15.52■□□□□ 0.08
CD4-208ENST00000538827 TMEM132AQ24JP5 1023 aa15.52■□□□□ 0.08
CD4-208ENST00000538827 CENPPQ6IPU0 288 aa15.52■□□□□ 0.08
CD4-208ENST00000538827 HS2ST1Q7LGA3 356 aa15.52■□□□□ 0.08
CD4-208ENST00000538827 CREBRFQ8IUR6 639 aa15.52■□□□□ 0.08
CD4-208ENST00000538827 CSGALNACT2Q8N6G5 542 aa15.52■□□□□ 0.08
CD4-208ENST00000538827 ANKLE1Q8NAG6 615 aa15.52■□□□□ 0.08
CD4-208ENST00000538827 DNAJB3Q8WWF6 145 aa15.52■□□□□ 0.08
CD4-208ENST00000538827 MED15Q96RN5 788 aa15.52■□□□□ 0.08
CD4-208ENST00000538827 DUSP9Q99956 384 aaKnown RBP15.52■□□□□ 0.08
CD4-208ENST00000538827 CRISPLD2Q9H0B8 497 aa15.52■□□□□ 0.08
CD4-208ENST00000538827 KCTD10Q9H3F6 313 aa15.52■□□□□ 0.08
CD4-208ENST00000538827 ST6GALNAC4Q9H4F1 302 aa15.52■□□□□ 0.08
CD4-208ENST00000538827 TMEM206Q9H813 350 aa15.52■□□□□ 0.08
CD4-208ENST00000538827 FANCLQ9NW38 375 aa15.52■□□□□ 0.08
CD4-208ENST00000538827 TBX20Q9UMR3 447 aa15.52■□□□□ 0.08
CD4-208ENST00000538827 GINS2Q9Y248 185 aa15.52■□□□□ 0.08
CD4-208ENST00000538827 A0A087WZ62 844 aa15.51■□□□□ 0.07
CD4-208ENST00000538827 INO80B-WBP1J3KQ70 363 aa15.51■□□□□ 0.07
CD4-208ENST00000538827 CLIC2O15247 247 aa15.51■□□□□ 0.07
CD4-208ENST00000538827 ASAP2O43150 1006 aa15.51■□□□□ 0.07
CD4-208ENST00000538827 PRKCBP05771 671 aa15.51■□□□□ 0.07
CD4-208ENST00000538827 HOXC8P31273 242 aa15.51■□□□□ 0.07
CD4-208ENST00000538827 ABCD1P33897 745 aa15.51■□□□□ 0.07
CD4-208ENST00000538827 LIG4P49917 911 aa15.51■□□□□ 0.07
CD4-208ENST00000538827 UVSSAQ2YD98 709 aa15.51■□□□□ 0.07
CD4-208ENST00000538827 ZCWPW2Q504Y3 356 aa15.51■□□□□ 0.07
CD4-208ENST00000538827 CDCA2Q69YH5 1023 aaPredicted RBP15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms