RNA–Protein interactions for RNA: ENST00000538786.1

ATL3-203, Transcript of atlastin GTPase 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ATL3, Length 1,920 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-203ENST00000538786 CEP112Q8N8E3 955 aa16.14■□□□□ 0.17
ATL3-203ENST00000538786 INTS2Q9H0H0 1204 aaKnown RBP16.14■□□□□ 0.17
ATL3-203ENST00000538786 POLR3FQ9H1D9 316 aaPredicted RBP16.14■□□□□ 0.17
ATL3-203ENST00000538786 ANO9A1A5B4 782 aa16.13■□□□□ 0.17
ATL3-203ENST00000538786 ANKRD63C9JTQ0 380 aa16.13■□□□□ 0.17
ATL3-203ENST00000538786 P4HA2O15460 535 aa16.13■□□□□ 0.17
ATL3-203ENST00000538786 SCP2P22307 547 aa16.13■□□□□ 0.17
ATL3-203ENST00000538786 ANXA13P27216 316 aa16.13■□□□□ 0.17
ATL3-203ENST00000538786 ADSSP30520 456 aa16.13■□□□□ 0.17
ATL3-203ENST00000538786 ERVK-9P63128 1117 aa16.13■□□□□ 0.17
ATL3-203ENST00000538786 WHAMMP3Q1A5X7 153 aa16.13■□□□□ 0.17
ATL3-203ENST00000538786 FAM160B1Q5W0V3 765 aa16.13■□□□□ 0.17
ATL3-203ENST00000538786 EEPD1Q7L9B9 569 aa16.13■□□□□ 0.17
ATL3-203ENST00000538786 TRIM58Q8NG06 486 aa16.13■□□□□ 0.17
ATL3-203ENST00000538786 AFAP1L1Q8TED9 768 aa16.13■□□□□ 0.17
ATL3-203ENST00000538786 SEPT1Q8WYJ6 367 aa16.13■□□□□ 0.17
ATL3-203ENST00000538786 PCYT2Q99447 389 aa16.13■□□□□ 0.17
ATL3-203ENST00000538786 DHX33Q9H6R0 707 aaKnown RBP16.13■□□□□ 0.17
ATL3-203ENST00000538786 LOC102724159A0A0B4J2E5 919 aa16.13■□□□□ 0.17
ATL3-203ENST00000538786 GGPS1O95749 300 aa16.13■□□□□ 0.17
ATL3-203ENST00000538786 DLG4P78352 724 aa16.13■□□□□ 0.17
ATL3-203ENST00000538786 PTK2Q05397 1052 aa16.13■□□□□ 0.17
ATL3-203ENST00000538786 CETN1Q12798 172 aa16.13■□□□□ 0.17
ATL3-203ENST00000538786 PWP2Q15269 919 aaKnown RBP16.13■□□□□ 0.17
ATL3-203ENST00000538786 MAP1SQ66K74 1059 aaPredicted RBP16.13■□□□□ 0.17
ATL3-203ENST00000538786 GJB7Q6PEY0 223 aa16.13■□□□□ 0.17
ATL3-203ENST00000538786 SRGAP1Q7Z6B7 1085 aa16.13■□□□□ 0.17
ATL3-203ENST00000538786 NRBP2Q9NSY0 501 aa16.13■□□□□ 0.17
ATL3-203ENST00000538786 ARHGAP28Q9P2N2 729 aa16.13■□□□□ 0.17
ATL3-203ENST00000538786 ADAMTS1Q9UHI8 967 aa16.13■□□□□ 0.17
ATL3-203ENST00000538786 DDX41Q9UJV9 622 aaKnown RBP16.13■□□□□ 0.17
ATL3-203ENST00000538786 AJAP1Q9UKB5 411 aaPredicted RBP16.13■□□□□ 0.17
ATL3-203ENST00000538786 ADGRA3Q8IWK6 1321 aa16.12■□□□□ 0.17
ATL3-203ENST00000538786 ARID2Q68CP9 1835 aa16.12■□□□□ 0.17
ATL3-203ENST00000538786 A0A087X0T9 212 aa16.12■□□□□ 0.17
ATL3-203ENST00000538786 PMM2O15305 246 aa16.12■□□□□ 0.17
ATL3-203ENST00000538786 RRP9O43818 475 aaKnown RBP16.12■□□□□ 0.17
ATL3-203ENST00000538786 TACC1O75410 805 aa16.12■□□□□ 0.17
ATL3-203ENST00000538786 FAM228BP0C875 321 aa16.12■□□□□ 0.17
ATL3-203ENST00000538786 POTEJP0CG39 1038 aa16.12■□□□□ 0.17
ATL3-203ENST00000538786 RFX1P22670 979 aa16.12■□□□□ 0.17
ATL3-203ENST00000538786 RFC5P40937 340 aa16.12■□□□□ 0.17
ATL3-203ENST00000538786 STAT1P42224 750 aa16.12■□□□□ 0.17
ATL3-203ENST00000538786 STAT5BP51692 787 aa16.12■□□□□ 0.17
ATL3-203ENST00000538786 LY6KQ17RY6 165 aa16.12■□□□□ 0.17
ATL3-203ENST00000538786 BRDTQ58F21 947 aaPredicted RBP16.12■□□□□ 0.17
ATL3-203ENST00000538786 PAPD7Q5XG87 772 aaKnown RBP16.12■□□□□ 0.17
ATL3-203ENST00000538786 RSRC2Q7L4I2 434 aaKnown RBP16.12■□□□□ 0.17
ATL3-203ENST00000538786 TRAPPC11Q7Z392 1133 aa16.12■□□□□ 0.17
ATL3-203ENST00000538786 MORC4Q8TE76 937 aa16.12■□□□□ 0.17
ATL3-203ENST00000538786 SLC7A3Q8WY07 619 aa16.12■□□□□ 0.17
ATL3-203ENST00000538786 KCNN1Q92952 543 aa16.12■□□□□ 0.17
ATL3-203ENST00000538786 CEP89Q96ST8 783 aa16.12■□□□□ 0.17
ATL3-203ENST00000538786 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.12■□□□□ 0.17
ATL3-203ENST00000538786 STK33Q9BYT3 514 aa16.12■□□□□ 0.17
ATL3-203ENST00000538786 PORCNQ9H237 461 aa16.12■□□□□ 0.17
ATL3-203ENST00000538786 ZNF408Q9H9D4 720 aa16.12■□□□□ 0.17
ATL3-203ENST00000538786 MLXIPQ9HAP2 919 aa16.12■□□□□ 0.17
ATL3-203ENST00000538786 APEX2Q9UBZ4 518 aa16.12■□□□□ 0.17
ATL3-203ENST00000538786 SLC45A1Q9Y2W3 748 aa16.12■□□□□ 0.17
ATL3-203ENST00000538786 EMSYQ7Z589 1322 aa16.12■□□□□ 0.17
ATL3-203ENST00000538786 ATP1A1P05023 1023 aaKnown RBP16.11■□□□□ 0.17
ATL3-203ENST00000538786 CYP2C8P10632 490 aa16.11■□□□□ 0.17
ATL3-203ENST00000538786 CETPP11597 493 aa16.11■□□□□ 0.17
ATL3-203ENST00000538786 FERP16591 822 aa16.11■□□□□ 0.17
ATL3-203ENST00000538786 TCF7P36402 384 aaPredicted RBP16.11■□□□□ 0.17
ATL3-203ENST00000538786 PPP3CAQ08209 521 aa16.11■□□□□ 0.17
ATL3-203ENST00000538786 ENOX2Q16206 610 aaKnown RBP16.11■□□□□ 0.17
ATL3-203ENST00000538786 SNRNP35Q16560 246 aaKnown RBP16.11■□□□□ 0.17
ATL3-203ENST00000538786 C1orf220Q5T0J3 134 aa16.11■□□□□ 0.17
ATL3-203ENST00000538786 C10orf76Q5T2E6 689 aa16.11■□□□□ 0.17
ATL3-203ENST00000538786 WDR78Q5VTH9 848 aa16.11■□□□□ 0.17
ATL3-203ENST00000538786 FMNL3Q8IVF7 1028 aa16.11■□□□□ 0.17
ATL3-203ENST00000538786 RNF10Q8N5U6 811 aaKnown RBP16.11■□□□□ 0.17
ATL3-203ENST00000538786 LMO3Q8TAP4 145 aa16.11■□□□□ 0.17
ATL3-203ENST00000538786 DNAJC12Q9UKB3 198 aa16.11■□□□□ 0.17
ATL3-203ENST00000538786 LRRC37A2A6NM11 1700 aa16.11■□□□□ 0.17
ATL3-203ENST00000538786 DOCK5Q9H7D0 1870 aa16.11■□□□□ 0.17
ATL3-203ENST00000538786 F8VZ95 297 aa16.11■□□□□ 0.17
ATL3-203ENST00000538786 ENC1O14682 589 aa16.11■□□□□ 0.17
ATL3-203ENST00000538786 ARIH2O95376 493 aa16.11■□□□□ 0.17
ATL3-203ENST00000538786 SOX5P35711 763 aa16.11■□□□□ 0.17
ATL3-203ENST00000538786 ARL2P36404 184 aa16.11■□□□□ 0.17
ATL3-203ENST00000538786 CHMP4BP1P59074 171 aa16.11■□□□□ 0.17
ATL3-203ENST00000538786 FKBP1BP68106 108 aa16.11■□□□□ 0.17
ATL3-203ENST00000538786 TARBP2Q15633 366 aaKnown RBP16.11■□□□□ 0.17
ATL3-203ENST00000538786 CELF3Q5SZQ8 465 aaKnown RBP16.11■□□□□ 0.17
ATL3-203ENST00000538786 SLC39A4Q6P5W5 647 aa16.11■□□□□ 0.17
ATL3-203ENST00000538786 ZNF571Q7Z3V5 609 aaPredicted RBP16.11■□□□□ 0.17
ATL3-203ENST00000538786 ZSWIM2Q8NEG5 633 aa16.11■□□□□ 0.17
ATL3-203ENST00000538786 GPRC5AQ8NFJ5 357 aa16.11■□□□□ 0.17
ATL3-203ENST00000538786 GOLGA1Q92805 767 aa16.11■□□□□ 0.17
ATL3-203ENST00000538786 MS4A4AQ96JQ5 239 aa16.11■□□□□ 0.17
ATL3-203ENST00000538786 FBXL18Q96ME1 805 aa16.11■□□□□ 0.17
ATL3-203ENST00000538786 ALS2CR12Q96Q35 445 aa16.11■□□□□ 0.17
ATL3-203ENST00000538786 PDCL3Q9H2J4 239 aa16.11■□□□□ 0.17
ATL3-203ENST00000538786 SAR1BQ9Y6B6 198 aa16.11■□□□□ 0.17
ATL3-203ENST00000538786 GOLGA8IPA6NC78 632 aa16.1■□□□□ 0.17
ATL3-203ENST00000538786 GOLGA8JA6NMD2 632 aa16.1■□□□□ 0.17
ATL3-203ENST00000538786 HNRNPDLO14979 420 aaKnown RBP16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms