RNA–Protein interactions for RNA: ENST00000537529.6

MKS1-204, Transcript of Meckel syndrome, type 1, humanhuman

TSL 1 (best) BASIC

Gene MKS1, Length 2,083 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-204ENST00000537529 SLC9A2Q9UBY0 812 aa17.02■□□□□ 0.32
MKS1-204ENST00000537529 TBX20Q9UMR3 447 aa17.02■□□□□ 0.32
MKS1-204ENST00000537529 RGS20O76081 388 aa17.01■□□□□ 0.31
MKS1-204ENST00000537529 NOP2P46087 812 aaKnown RBP17.01■□□□□ 0.31
MKS1-204ENST00000537529 NPTX2P47972 431 aa17.01■□□□□ 0.31
MKS1-204ENST00000537529 HIRAP54198 1017 aaPredicted RBP17.01■□□□□ 0.31
MKS1-204ENST00000537529 CASP8Q14790 479 aa17.01■□□□□ 0.31
MKS1-204ENST00000537529 TERF2Q15554 542 aa17.01■□□□□ 0.31
MKS1-204ENST00000537529 MAP4K3Q8IVH8 894 aa17.01■□□□□ 0.31
MKS1-204ENST00000537529 TMEM161BQ8NDZ6 487 aa17.01■□□□□ 0.31
MKS1-204ENST00000537529 LMO3Q8TAP4 145 aa17.01■□□□□ 0.31
MKS1-204ENST00000537529 GPR88Q9GZN0 384 aa17.01■□□□□ 0.31
MKS1-204ENST00000537529 KMT5AQ9NQR1 393 aa17.01■□□□□ 0.31
MKS1-204ENST00000537529 SPATA31C2B4DYI2 1134 aa17.01■□□□□ 0.31
MKS1-204ENST00000537529 DLG4P78352 724 aa17.01■□□□□ 0.31
MKS1-204ENST00000537529 MIS18BP1Q6P0N0 1132 aa17.01■□□□□ 0.31
MKS1-204ENST00000537529 MCPH1Q8NEM0 835 aa17.01■□□□□ 0.31
MKS1-204ENST00000537529 CHST13Q8NET6 341 aa17.01■□□□□ 0.31
MKS1-204ENST00000537529 SLC30A5Q8TAD4 765 aa17.01■□□□□ 0.31
MKS1-204ENST00000537529 LMBR1Q8WVP7 490 aa17.01■□□□□ 0.31
MKS1-204ENST00000537529 CES2O00748 559 aa17■□□□□ 0.31
MKS1-204ENST00000537529 PMM2O15305 246 aa17■□□□□ 0.31
MKS1-204ENST00000537529 ZNF862O60290 1169 aa17■□□□□ 0.31
MKS1-204ENST00000537529 ACTR2P61160 394 aa17■□□□□ 0.31
MKS1-204ENST00000537529 PPP3CAQ08209 521 aa17■□□□□ 0.31
MKS1-204ENST00000537529 PRKG1Q13976 671 aa17■□□□□ 0.31
MKS1-204ENST00000537529 KIF22Q14807 665 aa17■□□□□ 0.31
MKS1-204ENST00000537529 RPS6KA1Q15418 735 aa17■□□□□ 0.31
MKS1-204ENST00000537529 EPC2Q52LR7 807 aa17■□□□□ 0.31
MKS1-204ENST00000537529 SWSAP1Q6NVH7 229 aa17■□□□□ 0.31
MKS1-204ENST00000537529 LNX1Q8TBB1 728 aaPredicted RBP17■□□□□ 0.31
MKS1-204ENST00000537529 SUGCTQ9HAC7 445 aa17■□□□□ 0.31
MKS1-204ENST00000537529 SMARCAL1Q9NZC9 954 aa17■□□□□ 0.31
MKS1-204ENST00000537529 LOC285556D6RIA3 1793 aa17■□□□□ 0.31
MKS1-204ENST00000537529 DENND3A2RUS2 1198 aa17■□□□□ 0.31
MKS1-204ENST00000537529 USP2O75604 605 aaPredicted RBP17■□□□□ 0.31
MKS1-204ENST00000537529 DGAT1O75907 488 aa17■□□□□ 0.31
MKS1-204ENST00000537529 STBD1O95210 358 aa17■□□□□ 0.31
MKS1-204ENST00000537529 MATR3P43243 847 aaKnown RBP eCLIP17■□□□□ 0.31
MKS1-204ENST00000537529 TNNT3P45378 269 aaPredicted RBP17■□□□□ 0.31
MKS1-204ENST00000537529 GCLMP48507 274 aa17■□□□□ 0.31
MKS1-204ENST00000537529 MXI1P50539 228 aa17■□□□□ 0.31
MKS1-204ENST00000537529 RTP1P59025 263 aa17■□□□□ 0.31
MKS1-204ENST00000537529 PRKCEQ02156 737 aa17■□□□□ 0.31
MKS1-204ENST00000537529 ARHGAP44Q17R89 818 aa17■□□□□ 0.31
MKS1-204ENST00000537529 GLE1Q53GS7 698 aaKnown RBP17■□□□□ 0.31
MKS1-204ENST00000537529 PHLDB3Q6NSJ2 640 aa17■□□□□ 0.31
MKS1-204ENST00000537529 LRRC57Q8N9N7 239 aa17■□□□□ 0.31
MKS1-204ENST00000537529 DNERQ8NFT8 737 aa17■□□□□ 0.31
MKS1-204ENST00000537529 TPCN2Q8NHX9 752 aa17■□□□□ 0.31
MKS1-204ENST00000537529 SYT11Q9BT88 431 aa17■□□□□ 0.31
MKS1-204ENST00000537529 EHD2Q9NZN4 543 aa17■□□□□ 0.31
MKS1-204ENST00000537529 SEPT9Q9UHD8 586 aaPredicted RBP17■□□□□ 0.31
MKS1-204ENST00000537529 SNCAIPQ9Y6H5 919 aa17■□□□□ 0.31
MKS1-204ENST00000537529 WDR90Q96KV7 1748 aa16.99■□□□□ 0.31
MKS1-204ENST00000537529 POLR3GO15318 223 aaPredicted RBP16.99■□□□□ 0.31
MKS1-204ENST00000537529 DNA2P51530 1060 aa16.99■□□□□ 0.31
MKS1-204ENST00000537529 MCCD1P59942 119 aaPredicted RBP16.99■□□□□ 0.31
MKS1-204ENST00000537529 C1orf220Q5T0J3 134 aa16.99■□□□□ 0.31
MKS1-204ENST00000537529 ABHD15Q6UXT9 468 aa16.99■□□□□ 0.31
MKS1-204ENST00000537529 CCNI2Q6ZMN8 369 aaPredicted RBP16.99■□□□□ 0.31
MKS1-204ENST00000537529 GLYCTKQ8IVS8 523 aa16.99■□□□□ 0.31
MKS1-204ENST00000537529 SYCE1Q8N0S2 351 aa16.99■□□□□ 0.31
MKS1-204ENST00000537529 OLIG1Q8TAK6 271 aa16.99■□□□□ 0.31
MKS1-204ENST00000537529 MS4A14Q96JA4 679 aa16.99■□□□□ 0.31
MKS1-204ENST00000537529 NTPCRQ9BSD7 190 aaKnown RBP16.99■□□□□ 0.31
MKS1-204ENST00000537529 LRRC1Q9BTT6 524 aa16.99■□□□□ 0.31
MKS1-204ENST00000537529 VIPAS39Q9H9C1 493 aa16.99■□□□□ 0.31
MKS1-204ENST00000537529 ATP6V0A4Q9HBG4 840 aa16.99■□□□□ 0.31
MKS1-204ENST00000537529 NCANO14594 1321 aa16.99■□□□□ 0.31
MKS1-204ENST00000537529 H0YCG3 227 aa16.98■□□□□ 0.31
MKS1-204ENST00000537529 KIF4AO95239 1232 aa16.98■□□□□ 0.31
MKS1-204ENST00000537529 ADRB2P07550 413 aa16.98■□□□□ 0.31
MKS1-204ENST00000537529 TMEM253P0C7T8 217 aa16.98■□□□□ 0.31
MKS1-204ENST00000537529 SUPT20HL2P0C7V6 817 aa16.98■□□□□ 0.31
MKS1-204ENST00000537529 TNFAIP3P21580 790 aa16.98■□□□□ 0.31
MKS1-204ENST00000537529 ABCD1P33897 745 aa16.98■□□□□ 0.31
MKS1-204ENST00000537529 GALCP54803 685 aa16.98■□□□□ 0.31
MKS1-204ENST00000537529 SP4Q02446 784 aa16.98■□□□□ 0.31
MKS1-204ENST00000537529 VGLL4Q14135 290 aa16.98■□□□□ 0.31
MKS1-204ENST00000537529 STXBP2Q15833 593 aa16.98■□□□□ 0.31
MKS1-204ENST00000537529 SNRNP35Q16560 246 aaKnown RBP16.98■□□□□ 0.31
MKS1-204ENST00000537529 C8orf74Q6P047 294 aa16.98■□□□□ 0.31
MKS1-204ENST00000537529 CCDC60Q8IWA6 550 aaPredicted RBP16.98■□□□□ 0.31
MKS1-204ENST00000537529 BSNDQ8WZ55 320 aa16.98■□□□□ 0.31
MKS1-204ENST00000537529 PBKQ96KB5 322 aa16.98■□□□□ 0.31
MKS1-204ENST00000537529 KIFC3Q9BVG8 833 aa16.98■□□□□ 0.31
MKS1-204ENST00000537529 PDE11AQ9HCR9 933 aa16.98■□□□□ 0.31
MKS1-204ENST00000537529 UBE2TQ9NPD8 197 aaPredicted RBP16.98■□□□□ 0.31
MKS1-204ENST00000537529 RBM12Q9NTZ6 932 aaKnown RBP16.98■□□□□ 0.31
MKS1-204ENST00000537529 USP20Q9Y2K6 914 aa16.98■□□□□ 0.31
MKS1-204ENST00000537529 PFASO15067 1338 aa16.98■□□□□ 0.31
MKS1-204ENST00000537529 A0A0U1RQG5 324 aaPredicted RBP16.98■□□□□ 0.31
MKS1-204ENST00000537529 GOLGA8IPA6NC78 632 aa16.98■□□□□ 0.31
MKS1-204ENST00000537529 GOLGA8JA6NMD2 632 aa16.98■□□□□ 0.31
MKS1-204ENST00000537529 ANKRD63C9JTQ0 380 aa16.98■□□□□ 0.31
MKS1-204ENST00000537529 ZMYND10O75800 440 aa16.98■□□□□ 0.31
MKS1-204ENST00000537529 XKR3Q5GH77 459 aa16.98■□□□□ 0.31
MKS1-204ENST00000537529 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.98■□□□□ 0.31
MKS1-204ENST00000537529 PLEKHO2Q8TD55 490 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms