RNA–Protein interactions for RNA: ENST00000537320.5

TNC-211, Transcript of tenascin C, humanhuman

TSL 5 BASIC

Gene TNC, Length 4,946 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-211ENST00000537320 BCAP29Q9UHQ4 241 aa12.2□□□□□ -0.46
TNC-211ENST00000537320 GNA15P30679 374 aa12.2□□□□□ -0.46
TNC-211ENST00000537320 RPS6P62753 249 aaKnown RBP12.2□□□□□ -0.46
TNC-211ENST00000537320 ZC2HC1CQ53FD0 456 aaPredicted RBP12.2□□□□□ -0.46
TNC-211ENST00000537320 ZKSCAN4Q969J2 545 aaPredicted RBP12.2□□□□□ -0.46
TNC-211ENST00000537320 TIPINQ9BVW5 301 aa12.2□□□□□ -0.46
TNC-211ENST00000537320 HEMGNQ9BXL5 484 aa12.2□□□□□ -0.46
TNC-211ENST00000537320 MYO5BQ9ULV0 1848 aa12.2□□□□□ -0.46
TNC-211ENST00000537320 SLC16A3O15427 465 aaKnown RBP12.2□□□□□ -0.46
TNC-211ENST00000537320 RFX1P22670 979 aa12.2□□□□□ -0.46
TNC-211ENST00000537320 EFNA5P52803 228 aa12.2□□□□□ -0.46
TNC-211ENST00000537320 PDE1BQ01064 536 aa12.2□□□□□ -0.46
TNC-211ENST00000537320 ARHGEF18Q6ZSZ5 1173 aa12.2□□□□□ -0.46
TNC-211ENST00000537320 CATSPER3Q86XQ3 398 aa12.2□□□□□ -0.46
TNC-211ENST00000537320 SPATS2Q86XZ4 545 aaKnown RBP12.2□□□□□ -0.46
TNC-211ENST00000537320 BEST2Q8NFU1 509 aa12.2□□□□□ -0.46
TNC-211ENST00000537320 ZNF564Q8TBZ8 553 aaPredicted RBP12.2□□□□□ -0.46
TNC-211ENST00000537320 SEPT1Q8WYJ6 367 aa12.2□□□□□ -0.46
TNC-211ENST00000537320 NUP85Q9BW27 656 aa12.2□□□□□ -0.46
TNC-211ENST00000537320 SLMAPQ14BN4 828 aa12.2□□□□□ -0.46
TNC-211ENST00000537320 PPP6R3Q5H9R7 873 aaPredicted RBP12.2□□□□□ -0.46
TNC-211ENST00000537320 OSBPL9Q96SU4 736 aa12.2□□□□□ -0.46
TNC-211ENST00000537320 AGPAT5Q9NUQ2 364 aa12.2□□□□□ -0.46
TNC-211ENST00000537320 DNAJC17Q9NVM6 304 aaKnown RBP12.2□□□□□ -0.46
TNC-211ENST00000537320 IPO11Q9UI26 975 aaKnown RBP12.2□□□□□ -0.46
TNC-211ENST00000537320 PACSIN2Q9UNF0 486 aaPredicted RBP12.2□□□□□ -0.46
TNC-211ENST00000537320 UBE4BO95155 1302 aa12.19□□□□□ -0.46
TNC-211ENST00000537320 SYNGAP1Q96PV0 1343 aa12.19□□□□□ -0.46
TNC-211ENST00000537320 HUS1O60921 280 aa12.19□□□□□ -0.46
TNC-211ENST00000537320 CALB1P05937 261 aa12.19□□□□□ -0.46
TNC-211ENST00000537320 CIITAP33076 1130 aa12.19□□□□□ -0.46
TNC-211ENST00000537320 CCZ1BP86790 482 aa12.19□□□□□ -0.46
TNC-211ENST00000537320 CCZ1P86791 482 aaPredicted RBP12.19□□□□□ -0.46
TNC-211ENST00000537320 DUOXA2Q1HG44 320 aa12.19□□□□□ -0.46
TNC-211ENST00000537320 VGLL2Q8N8G2 317 aa12.19□□□□□ -0.46
TNC-211ENST00000537320 DNAAF3Q8N9W5 541 aa12.19□□□□□ -0.46
TNC-211ENST00000537320 PPP4R1Q8TF05 950 aa12.19□□□□□ -0.46
TNC-211ENST00000537320 TAAR1Q96RJ0 339 aa12.19□□□□□ -0.46
TNC-211ENST00000537320 GCOM2Q9BZD3 368 aaPredicted RBP12.19□□□□□ -0.46
TNC-211ENST00000537320 IRX2Q9BZI1 471 aaPredicted RBP12.19□□□□□ -0.46
TNC-211ENST00000537320 DIS3Q9Y2L1 958 aaKnown RBP12.19□□□□□ -0.46
TNC-211ENST00000537320 SALL1Q9NSC2 1324 aa12.19□□□□□ -0.46
TNC-211ENST00000537320 SLC26A4O43511 780 aa12.19□□□□□ -0.46
TNC-211ENST00000537320 CPP00450 1065 aa12.19□□□□□ -0.46
TNC-211ENST00000537320 PLS3P13797 630 aa12.19□□□□□ -0.46
TNC-211ENST00000537320 ZNF211Q13398 564 aaPredicted RBP12.19□□□□□ -0.46
TNC-211ENST00000537320 SNAPC2Q13487 334 aa12.19□□□□□ -0.46
TNC-211ENST00000537320 KCND2Q9NZV8 630 aa12.19□□□□□ -0.46
TNC-211ENST00000537320 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.19□□□□□ -0.46
TNC-211ENST00000537320 SH3BP5O60239 455 aa12.19□□□□□ -0.46
TNC-211ENST00000537320 PRKCBP05771 671 aa12.19□□□□□ -0.46
TNC-211ENST00000537320 RNF139Q8WU17 664 aa12.19□□□□□ -0.46
TNC-211ENST00000537320 SCYL1Q96KG9 808 aa12.19□□□□□ -0.46
TNC-211ENST00000537320 WDR24Q96S15 920 aa12.19□□□□□ -0.46
TNC-211ENST00000537320 FAM217BQ9NTX9 383 aaPredicted RBP12.19□□□□□ -0.46
TNC-211ENST00000537320 MAGED2Q9UNF1 606 aaPredicted RBP12.19□□□□□ -0.46
TNC-211ENST00000537320 SNX24Q9Y343 169 aa12.19□□□□□ -0.46
TNC-211ENST00000537320 AFG3L2Q9Y4W6 797 aa12.19□□□□□ -0.46
TNC-211ENST00000537320 MSH4O15457 936 aa12.19□□□□□ -0.46
TNC-211ENST00000537320 CSPG5O95196 566 aa12.19□□□□□ -0.46
TNC-211ENST00000537320 ZBED1O96006 694 aa12.19□□□□□ -0.46
TNC-211ENST00000537320 ACOT2P49753 483 aa12.19□□□□□ -0.46
TNC-211ENST00000537320 CUL1Q13616 776 aa12.19□□□□□ -0.46
TNC-211ENST00000537320 E4F1Q66K89 784 aaPredicted RBP12.19□□□□□ -0.46
TNC-211ENST00000537320 ENOSF1Q7L5Y1 443 aa12.19□□□□□ -0.46
TNC-211ENST00000537320 SCYL3Q8IZE3 742 aa12.19□□□□□ -0.46
TNC-211ENST00000537320 EHD4Q9H223 541 aa12.19□□□□□ -0.46
TNC-211ENST00000537320 PFDN4Q9NQP4 134 aa12.19□□□□□ -0.46
TNC-211ENST00000537320 SUCLA2Q9P2R7 463 aaPredicted RBP12.19□□□□□ -0.46
TNC-211ENST00000537320 TBK1Q9UHD2 729 aa12.19□□□□□ -0.46
TNC-211ENST00000537320 SLC12A6Q9UHW9 1150 aa12.19□□□□□ -0.46
TNC-211ENST00000537320 WTIPA6NIX2 430 aaPredicted RBP12.18□□□□□ -0.46
TNC-211ENST00000537320 PPP1R3GB7ZBB8 358 aa12.18□□□□□ -0.46
TNC-211ENST00000537320 RGL2O15211 777 aa12.18□□□□□ -0.46
TNC-211ENST00000537320 TJP3O95049 919 aa12.18□□□□□ -0.46
TNC-211ENST00000537320 GARSP41250 739 aaKnown RBP12.18□□□□□ -0.46
TNC-211ENST00000537320 EDRF1Q3B7T1 1238 aa12.18□□□□□ -0.46
TNC-211ENST00000537320 BBS9Q3SYG4 887 aa12.18□□□□□ -0.46
TNC-211ENST00000537320 EMBQ6PCB8 327 aa12.18□□□□□ -0.46
TNC-211ENST00000537320 LRRC8CQ8TDW0 803 aa12.18□□□□□ -0.46
TNC-211ENST00000537320 TYW5A2RUC4 315 aaKnown RBP12.18□□□□□ -0.46
TNC-211ENST00000537320 TNPO2O14787 897 aaKnown RBP12.18□□□□□ -0.46
TNC-211ENST00000537320 CYP26A1O43174 497 aa12.18□□□□□ -0.46
TNC-211ENST00000537320 SRGAP2BP0DMP2 458 aa12.18□□□□□ -0.46
TNC-211ENST00000537320 PRKCEQ02156 737 aa12.18□□□□□ -0.46
TNC-211ENST00000537320 CXCL9Q07325 125 aa12.18□□□□□ -0.46
TNC-211ENST00000537320 NAA30Q147X3 362 aaPredicted RBP12.18□□□□□ -0.46
TNC-211ENST00000537320 TMED2Q15363 201 aa12.18□□□□□ -0.46
TNC-211ENST00000537320 GPATCH11Q8N954 259 aa12.18□□□□□ -0.46
TNC-211ENST00000537320 MOV10L1Q9BXT6 1211 aaKnown RBP12.18□□□□□ -0.46
TNC-211ENST00000537320 STRIP2Q9ULQ0 834 aa12.18□□□□□ -0.46
TNC-211ENST00000537320 M0QYV0 167 aa12.18□□□□□ -0.46
TNC-211ENST00000537320 ICAM1P05362 532 aa12.18□□□□□ -0.46
TNC-211ENST00000537320 FMO5P49326 533 aa12.18□□□□□ -0.46
TNC-211ENST00000537320 DDR1Q08345 913 aa12.18□□□□□ -0.46
TNC-211ENST00000537320 NNTQ13423 1086 aa12.18□□□□□ -0.46
TNC-211ENST00000537320 PKN1Q16512 942 aa12.18□□□□□ -0.46
TNC-211ENST00000537320 NBPF9Q3BBW0 867 aa12.18□□□□□ -0.46
TNC-211ENST00000537320 GLE1Q53GS7 698 aaKnown RBP12.18□□□□□ -0.46
TNC-211ENST00000537320 RBM41Q96IZ5 413 aaKnown RBP12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms