RNA–Protein interactions for RNA: ENST00000536548.5

CPSF7-216, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-216ENST00000536548 GBP2P32456 591 aaPredicted RBP8.44□□□□□ -1.06
CPSF7-216ENST00000536548 ERVK-9P63128 1117 aa8.44□□□□□ -1.06
CPSF7-216ENST00000536548 IRX1P78414 480 aaPredicted RBP8.44□□□□□ -1.06
CPSF7-216ENST00000536548 MRPS25P82663 173 aaKnown RBP8.44□□□□□ -1.06
CPSF7-216ENST00000536548 EHHADHQ08426 723 aa8.44□□□□□ -1.06
CPSF7-216ENST00000536548 KLHL30Q0D2K2 578 aa8.44□□□□□ -1.06
CPSF7-216ENST00000536548 RIPK1Q13546 671 aa8.44□□□□□ -1.06
CPSF7-216ENST00000536548 UBE4AQ14139 1066 aa8.44□□□□□ -1.06
CPSF7-216ENST00000536548 KRT71Q3SY84 523 aa8.44□□□□□ -1.06
CPSF7-216ENST00000536548 FAM83BQ5T0W9 1011 aa8.44□□□□□ -1.06
CPSF7-216ENST00000536548 MAP3K21Q5TCX8 1036 aa8.44□□□□□ -1.06
CPSF7-216ENST00000536548 RCSD1Q6JBY9 416 aa8.44□□□□□ -1.06
CPSF7-216ENST00000536548 GADL1Q6ZQY3 521 aa8.44□□□□□ -1.06
CPSF7-216ENST00000536548 HEATR3Q7Z4Q2 680 aa8.44□□□□□ -1.06
CPSF7-216ENST00000536548 NEK8Q86SG6 692 aa8.44□□□□□ -1.06
CPSF7-216ENST00000536548 VPS36Q86VN1 386 aa8.44□□□□□ -1.06
CPSF7-216ENST00000536548 KLHL7Q8IXQ5 586 aa8.44□□□□□ -1.06
CPSF7-216ENST00000536548 MYOCDQ8IZQ8 938 aa8.44□□□□□ -1.06
CPSF7-216ENST00000536548 ZNF713Q8N859 430 aaPredicted RBP8.44□□□□□ -1.06
CPSF7-216ENST00000536548 KIAA0895Q8NCT3 520 aa8.44□□□□□ -1.06
CPSF7-216ENST00000536548 UBLCP1Q8WVY7 318 aaPredicted RBP8.44□□□□□ -1.06
CPSF7-216ENST00000536548 RAPGEF5Q92565 580 aa8.44□□□□□ -1.06
CPSF7-216ENST00000536548 CHMP6Q96FZ7 201 aa8.44□□□□□ -1.06
CPSF7-216ENST00000536548 SCLT1Q96NL6 688 aa8.44□□□□□ -1.06
CPSF7-216ENST00000536548 PLIN2Q99541 437 aa8.44□□□□□ -1.06
CPSF7-216ENST00000536548 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.44□□□□□ -1.061e-7■■■□□ 18.8
CPSF7-216ENST00000536548 LSM14BQ9BX40 385 aaKnown RBP8.44□□□□□ -1.06
CPSF7-216ENST00000536548 MOV10L1Q9BXT6 1211 aaKnown RBP8.44□□□□□ -1.06
CPSF7-216ENST00000536548 ZNF341Q9BYN7 854 aa8.44□□□□□ -1.06
CPSF7-216ENST00000536548 FAM129AQ9BZQ8 928 aa8.44□□□□□ -1.06
CPSF7-216ENST00000536548 ZNF576Q9H609 170 aa8.44□□□□□ -1.06
CPSF7-216ENST00000536548 SLC39A2Q9NP94 309 aa8.44□□□□□ -1.06
CPSF7-216ENST00000536548 BMP2KQ9NSY1 1161 aaPredicted RBP8.44□□□□□ -1.06
CPSF7-216ENST00000536548 HAUS2Q9NVX0 235 aa8.44□□□□□ -1.06
CPSF7-216ENST00000536548 AIPL1Q9NZN9 384 aa8.44□□□□□ -1.06
CPSF7-216ENST00000536548 BCCIPQ9P287 314 aaKnown RBP eCLIP8.44□□□□□ -1.06
CPSF7-216ENST00000536548 PRKAG2Q9UGJ0 569 aa8.44□□□□□ -1.06
CPSF7-216ENST00000536548 SALL4Q9UJQ4 1053 aa8.44□□□□□ -1.06
CPSF7-216ENST00000536548 TPX2Q9ULW0 747 aaKnown RBP8.44□□□□□ -1.06
CPSF7-216ENST00000536548 NFS1Q9Y697 457 aa8.44□□□□□ -1.06
CPSF7-216ENST00000536548 MYH2Q9UKX2 1941 aa8.44□□□□□ -1.06
CPSF7-216ENST00000536548 TRANK1O15050 2925 aa8.43□□□□□ -1.06
CPSF7-216ENST00000536548 A0A0A6YYK5 440 aaPredicted RBP8.43□□□□□ -1.06
CPSF7-216ENST00000536548 CCT8L1PA6NM43 557 aa8.43□□□□□ -1.06
CPSF7-216ENST00000536548 KCNK3O14649 394 aa8.43□□□□□ -1.06
CPSF7-216ENST00000536548 PPP1R12AO14974 1030 aaPredicted RBP8.43□□□□□ -1.06
CPSF7-216ENST00000536548 EPHB6O15197 1021 aa8.43□□□□□ -1.06
CPSF7-216ENST00000536548 CEP104O60308 925 aa8.43□□□□□ -1.06
CPSF7-216ENST00000536548 BMP1P13497 986 aa8.43□□□□□ -1.06
CPSF7-216ENST00000536548 DRD4P21917 467 aa8.43□□□□□ -1.06
CPSF7-216ENST00000536548 KLRC1P26715 233 aa8.43□□□□□ -1.06
CPSF7-216ENST00000536548 SMARCA1P28370 1054 aa8.43□□□□□ -1.06
CPSF7-216ENST00000536548 FXR2P51116 673 aaKnown RBP eCLIP8.43□□□□□ -1.06
CPSF7-216ENST00000536548 MARSP56192 900 aaKnown RBP8.43□□□□□ -1.06
CPSF7-216ENST00000536548 DYNLL1P63167 89 aaKnown RBP8.43□□□□□ -1.06
CPSF7-216ENST00000536548 TFF2Q03403 129 aa8.43□□□□□ -1.06
CPSF7-216ENST00000536548 RAPGEF1Q13905 1077 aa8.43□□□□□ -1.06
CPSF7-216ENST00000536548 ZKSCAN8Q15776 578 aaPredicted RBP8.43□□□□□ -1.06
CPSF7-216ENST00000536548 KIAA0753Q2KHM9 967 aa8.43□□□□□ -1.06
CPSF7-216ENST00000536548 TMEM31Q5JXX7 168 aa8.43□□□□□ -1.06
CPSF7-216ENST00000536548 LRRC55Q6ZSA7 311 aa8.43□□□□□ -1.06
CPSF7-216ENST00000536548 ZNF804AQ7Z570 1209 aa8.43□□□□□ -1.06
CPSF7-216ENST00000536548 MAB21L3Q8N8X9 362 aa8.43□□□□□ -1.06
CPSF7-216ENST00000536548 CCDC63Q8NA47 563 aa8.43□□□□□ -1.06
CPSF7-216ENST00000536548 PNMA1Q8ND90 353 aa8.43□□□□□ -1.06
CPSF7-216ENST00000536548 CCT6BQ92526 530 aa8.43□□□□□ -1.06
CPSF7-216ENST00000536548 TBC1D5Q92609 795 aa8.43□□□□□ -1.06
CPSF7-216ENST00000536548 LARP4BQ92615 738 aaKnown RBP8.43□□□□□ -1.06
CPSF7-216ENST00000536548 GPKOWQ92917 476 aaPredicted RBP eCLIP8.43□□□□□ -1.063e-7■■■■□ 21.6
CPSF7-216ENST00000536548 KHSRPQ92945 711 aaKnown RBP eCLIP8.43□□□□□ -1.06
CPSF7-216ENST00000536548 XPO6Q96QU8 1125 aaKnown RBP8.43□□□□□ -1.06
CPSF7-216ENST00000536548 NAP1L3Q99457 506 aaPredicted RBP8.43□□□□□ -1.06
CPSF7-216ENST00000536548 P2RX7Q99572 595 aaKnown RBP8.43□□□□□ -1.06
CPSF7-216ENST00000536548 PLCD4Q9BRC7 762 aa8.43□□□□□ -1.06
CPSF7-216ENST00000536548 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.43□□□□□ -1.06
CPSF7-216ENST00000536548 SPZ1Q9BXG8 430 aa8.43□□□□□ -1.06
CPSF7-216ENST00000536548 OSBPL7Q9BZF2 842 aa8.43□□□□□ -1.06
CPSF7-216ENST00000536548 ZMYND12Q9H0C1 365 aa8.43□□□□□ -1.06
CPSF7-216ENST00000536548 PRDM5Q9NQX1 630 aaPredicted RBP8.43□□□□□ -1.06
CPSF7-216ENST00000536548 SAMD15Q9P1V8 674 aa8.43□□□□□ -1.06
CPSF7-216ENST00000536548 INTUQ9ULD6 942 aa8.43□□□□□ -1.06
CPSF7-216ENST00000536548 NOVA2Q9UNW9 492 aaKnown RBP8.43□□□□□ -1.06
CPSF7-216ENST00000536548 UTP11Q9Y3A2 253 aaKnown RBP8.43□□□□□ -1.06
CPSF7-216ENST00000536548 DCHS1Q96JQ0 3298 aa8.42□□□□□ -1.06
CPSF7-216ENST00000536548 CYP2D7A0A087X1C5 515 aa8.42□□□□□ -1.06
CPSF7-216ENST00000536548 A0A0G2JLL6 359 aaPredicted RBP8.42□□□□□ -1.06
CPSF7-216ENST00000536548 ESYT2A0FGR8 921 aa8.42□□□□□ -1.06
CPSF7-216ENST00000536548 FAM187AA6NFU0 413 aa8.42□□□□□ -1.06
CPSF7-216ENST00000536548 ZSCAN5CA6NGD5 496 aaPredicted RBP8.42□□□□□ -1.06
CPSF7-216ENST00000536548 CCDC169A6NNP5 214 aa8.42□□□□□ -1.06
CPSF7-216ENST00000536548 DNM1LO00429 736 aa8.42□□□□□ -1.06
CPSF7-216ENST00000536548 KRIT1O00522 736 aa8.42□□□□□ -1.06
CPSF7-216ENST00000536548 CXCL11O14625 94 aa8.42□□□□□ -1.06
CPSF7-216ENST00000536548 SART1O43290 800 aaKnown RBP8.42□□□□□ -1.06
CPSF7-216ENST00000536548 CCNT1O60563 726 aaKnown RBP8.42□□□□□ -1.06
CPSF7-216ENST00000536548 BUB1BO60566 1050 aaPredicted RBP8.42□□□□□ -1.06
CPSF7-216ENST00000536548 FLOT1O75955 427 aa8.42□□□□□ -1.06
CPSF7-216ENST00000536548 GFPT2O94808 682 aa8.42□□□□□ -1.06
CPSF7-216ENST00000536548 ATP6V1G2O95670 118 aa8.42□□□□□ -1.06
CPSF7-216ENST00000536548 DNAJB2P25686 324 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms